Array 1 217638-218569 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967965.1 Anaerolinea thermolimosa strain IMO-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 217638 36 100.0 38 .................................... CGAGACCGACCCGCCAGGAACGCAAATCTGGCTGGAGC 217712 36 100.0 35 .................................... TTTGTTGGCCGGATTGGCCTTGCTGGCCGGATTGG 217783 36 100.0 39 .................................... TGAGCGGGTGAGAAAAGTTGATAATCACGGTAGTCCTCC 217858 36 100.0 40 .................................... CAAGCCGCGTCATCATTGGGGAATGGCCCCCCTATCAGGG 217934 36 100.0 36 .................................... GGATTTGTGCTTTCATTGACGCCGAGCACGCTCTTG 218006 36 100.0 38 .................................... GCGGCCTGAGTTGCCGACGGGTCAAATCGATCACGAAT 218080 36 100.0 42 .................................... TTACAGGCAGGACATTCAAACTCAGCATAGAAAAAATTGTAG 218158 36 100.0 38 .................................... TCACGGCATGCTAATGTTATTGCATCACGATTCATCAC 218232 36 100.0 40 .................................... GTTCTATATCCAAGGAGCTCGCCCCCATCGAGCTCCTTCA 218308 36 100.0 40 .................................... CGGTCAGACCGGGCAATGGAGGATGACATGGTATTCAAAA 218384 36 100.0 38 .................................... TAGTACAGGGATGAAAGTGTCCTTGTTTTCAACAATCC 218458 36 100.0 40 .................................... ACCTTGACCGCATACTGGTTGTACGCGGTCACATGCCCAA 218534 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 13 36 100.0 39 GTCAGAATCCATAAATGCCCGTCAGGGCATTAAGAC # Left flank : GGGTTTGTGGTGAGTGAAGAAGTGCTCTACTTCTGGCCGACGCTGGGGGAGGGGTATTTGTTGAATACGCTGGCCTCGGTGTTCCTGGGGGGCACCTCGGTGTTTGGCGGCACGGGCACCATTTTTGGCACGTTTGTGGCCTCGTTTATCATCGGGGCGATCAATGCCGGTATTGTGGCCGCCGGGCTGACGGGCTTCTGGACGAATGTGATTTACGGTTTGATTGTGGTGGTTTCGGTTTCACTGCAGGCGGTGTTGAGCCGTAAACTGGCGCACTCCTAGGCGGTGCCTGTTCGCGCACCCCCCCTCTGAAAAGGTTCATTTTGGGCGATTTTTTCAGGGGGGGTGCGCGAAAAATGAGAAGGTGGGGCCAGCATGGATAAAAAAAGCAGAAAGAGAGGAAGAAGTGGAAAGGCCCCTGCTTTTTTCGGCGCGAGAGACCTCTTTACAAAGCCAGATGGGCATGTTATACTGGGGTCAGTGGATGGGGTGATTGTACA # Right flank : CGGGGCCGGTTCTCGTGCCCCTCCAGAAAGGCCGTCTCTCTCTGTCAGAATCCATGCGATAGCCAGGAGAACTTACCCCGGGGGTGATGTTCATCCCGCGGGGGAGTTTTTTCACCCACCGGGAGGATCAAAATTCTGGACAGCCCCGTTGTGCCGGGGTATGATTAACGCATCTCACCCTGCAGAGAGAGACCAGCCCATGCCTTCTTCTCGTGAGCTTGTTTCCCGGGCGCTGAACTTCCAGCCGGTAGAGCGTATTCCCAAAGACCTGGGGGGCATGCGTTCTACTTCCATCAGCGCGTTTGCCTACCCCGGCCTGGTGCGTGCACTTGGCCTGCCGCCGCGCCCCCCGCGGGTGGAAGATACCTGGCAGATGCTCGCTCTGCCCGATCTGGACGTGCTCGATGCGCTGGGGGTAGACGTGGTGAGCATCCTCGATGGCGTGACCAATGCCCTGCCGCCCGAGGCCCAGGCTGATCTCTGGCACGATTACGATTTCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAATCCATAAATGCCCGTCAGGGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 1037180-1036776 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967965.1 Anaerolinea thermolimosa strain IMO-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1037179 37 100.0 36 ..................................... CCGGTTGAGTTCAACCAGCATGTCTCCATACAGAAG 1037106 37 100.0 37 ..................................... TAAATTTTTCTAATGCTGTAAAAATTATCCGAATATT 1037032 37 100.0 36 ..................................... TTCAGTCACGTATGGCGGGCAGGCCAAATGGATGAT 1036959 37 100.0 37 ..................................... TTGAAAAAGGTTTGAAGCCATGTTTCGGATGGCTTCC 1036885 37 94.6 37 ................................A...T TATGAAATCTACAAGTTGTTCTTTTTTCGTTGAATCT 1036811 36 73.0 0 ......C......A....A.C.CA..-....GA...G | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 94.6 37 GTTGCAACCCCTCGATCCGCTCTGAGGATATTGAAAC # Left flank : CCAAACAAAAACCATACCACAGAAACCAGGATGGTGTTTGATGTAGGGAGCCTGTACGCGCATTTTCAATGCCTGCAGGACACCAGGAAGCTCAGGGAGGTACGGTATCCGCTGGCACTGGTACTGCTGCTGATCGTACTGGCGAAGATCTGCGGAGAAGATCGTCCCAGCGGGATTGCCGAATGGGCCAAACATCGCACAGAGATGCTGGTGGAATGGATAAAGTTGAAGAGGAGAAGCATGCCGCATCACAGTACCTAACTCGATTTTAAGAAAGCCTTGAATCCACTCCCCAGAGGCATATAGAGCTTTCTATTATGGTGTTTATTGACTCTATAAGCACATGGGCTTTTATACCCATCTTTCGCAAATCGGCATTGTTTTAATGCAAAAAACGATTTTCGAAGCGAAAAATGATTATTCCATTTCACAGCACAAGATATGGTTCTGATTATTTATTTTGTCCCTTATATATGGTATATACTTAATAAGAATTCTGC # Right flank : TTGACGATGGATTAACTTTTAAGACACATTCACCCTGTATGGGTGAATGTGTCTTTATAAAGAAAATTACGAAGGCAAAGGATTAATTTTATAGTGTCCAGAAGCCCTGGTCGTGTAAAGAAAATTTTCGCGGTTCTGTTAATACTGACCCGGGAACCCATCCGTGCCCGATACTTGATAAAGCATTCCATCCTTGAACCATATCGCGTCCGCTAAATGATTCGATATTTCCACTAATTTGAATGCACTCATTTATGAGGGTATGGGCTAAAAGGTGAGAGGTATAAATTTCTGGGTAATCAACATTTTGCGTATGCACTTCATACCCAAAAAATTGATTTTCCTCAACAAGGGTTCTCTCCCGGCTGAGCCATCCCTGTCCATGGCGTATATCACCACCTACAAAGAGTTGCGGTAACTGAGCAAGGGCATCTAAGACTTCATTATCCCCATTTATAAATATATACCCGGTTAGTCCCACTTTTTCTAAGACTGCATTT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACCCCTCGATCCGCTCTGAGGATATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.90,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 1 374227-368060 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967966.1 Anaerolinea thermolimosa strain IMO-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================================================================================================================= ================== 374226 37 100.0 36 ..................................... ACGACGGGCAAGGAATACGCTTACGAGCTGGTCAAC 374153 37 100.0 35 ..................................... ATCTCTTCAAATTTTCCGCACTTGCTACAAATTAC 374081 37 100.0 37 ..................................... ATTATCGGACGATCAAGTCTTCTTCCATAACGCCGGT 374007 37 100.0 37 ..................................... TTCGCGTTCTCTGTCAGGCATGTCCTCGTACGGGTCA 373933 37 100.0 35 ..................................... CGAATCTGATCCAGCTTCTCATGCACCGCGCTCAA 373861 37 100.0 35 ..................................... ACAAAACCGCAACGATCGCGGCTCCGGTCAGCGAA 373789 37 100.0 37 ..................................... TCCTCACAGGCTATCCAGGCATCACCAACATCCAGCA 373715 37 100.0 35 ..................................... GCAACGTCACGGCGGCATCTGGGAACTGAGCACGG 373643 37 100.0 37 ..................................... CCCAGGCGTAATTGTGCGTCCGCGCTCCGCTCCCGCT 373569 37 100.0 35 ..................................... GCGAATGATGTTGATGTCCTTCTGCCCGCGGCAGG 373497 37 100.0 37 ..................................... GGATCACATTCAGATCGCGTTGCCCGCGGCAGGCGTT 373423 37 100.0 36 ..................................... TCAGACGATTCGAATGATCAAGTCTTGCGACTATAG 373350 37 100.0 35 ..................................... TGTTTGGCCAGCGCATGCATGGATACGACTGCCAG 373278 37 100.0 35 ..................................... ATGGACGGGCTGACCGAAGACAATTGGAACGGGCT 373206 37 100.0 37 ..................................... TCATTTGCAGTGTATGTAACCGGCTGACCGTCTTTTC 373132 37 100.0 35 ..................................... GGTAAGCCACCGGCGGGGCTGGTCATTGATTGGAA 373060 37 100.0 35 ..................................... GCTTTTTGAATATTCATTCAAGCGTTTCCAGAATG 372988 37 100.0 37 ..................................... ATACAACCGCAGCAGCGCTCGCGCCGCTTTGCGCTTT 372914 37 100.0 36 ..................................... GCGATACAAGGCGATAAGTTTGCGCGCCAGTTCGCG 372841 37 100.0 37 ..................................... GGGACATTCCTGCACCATCAGGCGCAGGAGCGGATTT 372767 37 100.0 37 ..................................... GAAAAAACAAATAAAACTCCCCCCGGGGTGTACACCC 372693 37 100.0 37 ..................................... CTCTCTCTTTGTAACTTGCCAGTGACTAGCATTTTCT 372619 37 100.0 36 ..................................... GCGGCTGGGCCCATCCTGGACAGTCGAACCGGCCGG 372546 37 100.0 36 ..................................... CTACTAGAGGATCCGTGGGAAGCGGCGGCGCGGGGG 372473 37 100.0 37 ..................................... GCTTGAGCGGGTGGTAGTTCACCTCGCCCACAAGGAT 372399 37 100.0 36 ..................................... GTACGCCTGTTCGACACTATGCTGCCCGACTTCAAG 372326 37 100.0 34 ..................................... CCAGATTCCGGTGGCTACCATCCGGAGAGGTGAC 372255 37 100.0 37 ..................................... TCTACGTACTTAAGGACTTTTTTACAGTCCATACAAT 372181 37 100.0 36 ..................................... ATACCCGATTTCCATCCTCAACATGCACCGCTTCAG 372108 37 100.0 35 ..................................... ACGACGGGCAAGGAATACGCTTACGAGCTGGTCAA 372036 37 100.0 35 ..................................... TCAGGTCTTCAATGTTCAATGTCTGAGCCCCTGTC 371964 37 100.0 36 ..................................... TTTGAGAATGGTTTCCACATTACTCGCCCCCTTGCA 371891 37 100.0 36 ..................................... CTTGTAACATTAACATAATTATCACCCATTCCATGC 371818 37 100.0 36 ..................................... ATCATCGCAGGCTACCCAGGCATCGCCGGTTTCCAG 371745 37 100.0 36 ..................................... GATTTTTAGCATACCTCCCCCCACCTATGGTGGTTA 371672 37 100.0 38 ..................................... AACGTCTGTGTGATATGGTGGAATTATCCACCGTCTTT 371597 37 100.0 36 ..................................... GTTTTTTTGATTATATCGCGCGCGTTTGCCTGTCAA 371524 37 100.0 37 ..................................... GTAACCCAGGGTTGAATACTAGACAGCTTAAAATCAA 371450 37 100.0 37 ..................................... AAAGCGCCGGAGTCGCGGTCGGCGTCCAATCCGCTTG 371376 37 100.0 37 ..................................... ACCCGTCAAACTGAAACCGGTCGGCAGGTTGAAAGTC 371302 37 100.0 36 ..................................... AGTATGATAAGGCTTTTGCTTCATTCAGTTTCCCGA 371229 37 100.0 36 ..................................... TGACATAACGTATCCTCTCGGAAAGACGCTCCAGCA 371156 37 100.0 36 ..................................... CGTTGACGTCCGCGAGACCGGAGGTGATCACCTCCG 371083 37 100.0 35 ..................................... TTATTCAGCAAGAGCCTCTGGCTGGTGTTTTGGTT 371011 37 100.0 35 ..................................... GGATGCAGGTTAAGGTACGCACCGGGGGTGCATGG 370939 37 100.0 36 ..................................... ACCGATTCAGCGTAAACGCTCCATTCGTTCACCGAC 370866 37 100.0 37 ..................................... GAAGCGCGGCTTCGGGAGGTGTACGGGGTGGTGAAGG 370792 37 100.0 35 ..................................... GAAACACGGCCCTGGGCTGGATTGGTCGGGGATAC 370720 37 100.0 35 ..................................... CGAACGCCCCGCTGGTAGATGTCCCAAAACCAATT 370648 37 100.0 37 ..................................... TATAATTATATTTGCGCGACTCTGGATCGATGCCGCA 370574 37 100.0 37 ..................................... TTCGCATATGTCGTATATGGCAAACGCTTCCATCTCC 370500 37 100.0 38 ..................................... ACCACCAGCCCGTTTTCCATCGACTTGATGACCAGTCC 370425 37 100.0 38 ..................................... TTGGCGAAGGGTGCCTGACCGCCGGGAGCGGTCCATTT 370350 37 100.0 36 ..................................... TCATAGACAAGATCAAGGATGGCGATGAGAACAGTG 370277 37 100.0 36 ..................................... TCCCCAGCCCCGAAATCGCGCAAACGGGCTCAGAGC 370204 37 100.0 35 ..................................... TTTTTCGGTAGTGGGGCGGTGTTGTTGAACCGGAC 370132 37 100.0 35 ..................................... TTATCAACAATCATTCGCGTGTAATTGATGCGCAC 370060 37 100.0 36 ..................................... AATTCTATCTACATGTCGCTGCTGGACTTACTCGGT 369987 37 100.0 35 ..................................... TGGCACACGGCTTATCTCATGCAGAGCTTGTCGTA 369915 37 100.0 35 ..................................... ATTTTGATCAGCGAGTTGCTCTCGTTCGAGAGCAA 369843 37 100.0 35 ..................................... GCTGAAGGCGGGGAATATGTCATCGGGGTGGACGT 369771 37 100.0 37 ..................................... AGTTGCTTTCCCAGGGCAAGGATGCGCGAGGGTTCTT 369697 37 100.0 37 ..................................... CGTAGATTGTCTGGATTGTCAGCAGACCTCACCCACA 369623 37 100.0 36 ..................................... CACTTCGTCTACTACCACATCCCAGGCGTCTAGGTT 369550 37 100.0 36 ..................................... AGTTTTTTCGTCCCTCACCACCCAAGGCGCGTGACG 369477 37 100.0 36 ..................................... CATTGTAATGTCTGTGTTTGTTTTCAATGTATTTTT 369404 37 100.0 36 ..................................... TTATGCAGGCATTGCGCGAGGGGCGCATCTTAGAAG 369331 37 100.0 36 ..................................... TCAAGTCTTGGTTGGACTGCGCTCGCGCCGGATCTT 369258 37 100.0 37 ..................................... GATTTTCGGGTTGGCATCCGGTATGTCAGATAGATCG 369184 37 100.0 35 ..................................... TGTATTCAGCTTCAGAGATAATCCTTTTTTTGTAA 369112 37 100.0 36 ..................................... GCGACGTAATCTCGACGAGCTACGTCCCGAATATCG 369039 37 100.0 37 ..................................... CTCTACGCGATTTTGTATGCGTCAGCGTATATATCTC 368965 37 100.0 36 ..................................... GCGCTTGACGCGCATCAGTGACGGGGCTGGCGGATG 368892 37 100.0 36 ..................................... CCGGTCTCGACAAGAGAGTAGGGGGCTATCTTTTCA 368819 37 100.0 36 ..................................... AGCAGCGTCTGTACAGCTGCGCGGTCAATTCTGTTC 368746 37 100.0 35 ..................................... GCTTGAATGTCCATCAGGCGGATTTTGGCAGCGGC 368674 37 100.0 37 ..................................... GGAAATCAATCTGGAGCGTGTATTTGTAGGTTGACTG 368600 37 100.0 36 ..................................... TTAGGAAGGATGTAACCGGATTGCCGTTGCTTTCGG 368527 37 100.0 37 ..................................... CGGACACCTCACCGTCTGGGGCGGTGAGGGACACCGA 368453 37 100.0 37 ..................................... ACTGTAATCAAGTAAAGCGTGAGATCTCCGCGTTTCT 368379 37 100.0 36 ..................................... TAACGTTGCAGTCCATCGCGGGCTTGGGCTGGCTGT 368306 37 100.0 169 ..................................... GCGTTGCGCTCGAGTGTCGAAAACCAGGCGCCACTTACCTGCAAGGGACTGATGACGGGGAGCCTGTCCGTCCGGGCGCTTTTTCTTTTCTGCGGTACAAATAGCATTCCCTGGATCGATACGTAGATCCCAAGTTGTTTGTTTTCTGTTATAATATGAATATATGGGG 368100 37 78.4 0 ......G.T.G....C......CA.....G......C | TG,A,A [368089,368094,368096] ========== ====== ====== ====== ===================================== ========================================================================================================================================================================= ================== 83 37 99.7 38 GTTGCACCCCCCTCGATCCGTTAGTGGATACTGAAAT # Left flank : ACCTTGTCATCTGGGTGGATGAGCCAGCACCCGGCGAGGTGATCCCGGTTGATTTTAAGTTTTCTCACCGCGCGGGGGAGCACTTTAAACTTCAGCTCGTGGCGTACGGGATGCTCCTGGAAGAAATGAGCGGTAAACCCTCCCGCCGTGGTTTTCTGGTCGAAATTCCCCTGCGGCGTGCCGTAGAAGTTCCCTTCACCCCGGCTTTGCGTGAGAGGGTGCAAGAAATCCTCGATCAGATGCGGGGCGTACTGGAAAGTGAACGCATGCCGCCGCCTACCACCCAGCTTCAGCGGTGCGTCTCCTGCGAATTCCGCCGGTTTTGCAACGACCGTTTGTAAACGAGACTCTTTTCGCAAATCTCCCCGGTTTTTAAGCAAAAAACGGTTTGCGAAAACTGCTCCGCCCCCCCCGAGCAGTACCCCTGCAGAATGGCCTTAAAATGCCCGCAGAGCCCCGAAAATGGATGTATAATAGGTTTTGAGGTGCGAAAATACGCG # Right flank : CACAGCGAGCCCATAAACAGCCGCCTCATCTATCCTGTCTTGAAAACATAAACCAGGTGAGAACAACATGTTTGACAAAGCAGCCAAGGCGGTCCAGTGGACGATCGGCATTATCTTTCTCATTTTCTGGATGTTTGTGGTAATCCTTGCTTTTCCGTACATTGCCATGCCGGCCCTGGTAGTCGGGCTGGTCATTTCCGGGCTGATTGCAGGCGAGTTCACTCTGGATGACCTGAAACCGAAGGAGGTGAAGAAGAAAGAGGAAGAGGAAAACTGGATGTCGGATTGGGACGAACCGCAAGACTGGAGCTTTTGACAGGGATGGATTGTCTTCGACAAAAACAAAGCACAGGGAGGAAAACATGAACAACACAGAAGAACTGCCATATGAAGCGATTTGTGCCCTTTGCGGTCAATTGTTCGAGATGGAGAAGCGGCCCGAGCCTAGCGTGCTATACGCCTGCAAGGACTGCACGCCGCCCAAAGAGGAAGACTTTTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCCCCTCGATCCGTTAGTGGATACTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 80240-83206 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967967.1 Anaerolinea thermolimosa strain IMO-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 80240 37 100.0 36 ..................................... GCGCTTGAGGCATATCTCGGAACTCAGCCGGGACTT 80313 37 100.0 36 ..................................... CCAGGCGCTTACATCCGTGCTGTTGAATGTTCCGCT 80386 37 100.0 36 ..................................... AAAACCGGTGGCGGGGCGCGCATGCCGAATACGCGC 80459 37 100.0 35 ..................................... CCTGGTTGCCCAGGGCCACCACCCTGGTTGTCCCT 80531 37 100.0 37 ..................................... GCATACTATGTGATTCGAGCGCTGGAGCTGGACGGAG 80605 37 100.0 36 ..................................... CACAGATTACTCTTGAGCATCTGCGCGATTTTTTTG 80678 37 100.0 38 ..................................... CTGGCATGGTTACCTCTTTAACGCGCTCCGGGCAGCGT 80753 37 100.0 37 ..................................... TTCGAGGGTGACCTCGTCCCAGCCCTCCGCCGTGTGG 80827 37 100.0 37 ..................................... ATCATCCTGGAGGCGACCGGAGCGGGTCTGACAGATT 80901 37 100.0 36 ..................................... CGAACAGTCGTTCCTCTTCGCTTTCCGGCATCAATT 80974 37 100.0 37 ..................................... CATAGTCTCGGCGGCATTCGACCTCATTCGCAAAGAG 81048 37 100.0 37 ..................................... TATAAACGGCATCTTTGAGTTCTTCCAGCAGTCTTTC 81122 37 100.0 35 ..................................... TCTCCCCAGTCCACCAGCGCCGTGCTGCGCACCGT 81194 37 100.0 37 ..................................... TTCGGTTGGAGTGCTGGGCGTTCTCAGGAATGGACGT 81268 37 100.0 38 ..................................... CTGCCGGAGCCCGGCCTTGCGACGCGCGTAATCGGTTA 81343 37 100.0 36 ..................................... GCAAAATTAGGGCGGGCGCGAGGCGCGTTGCGGCTT 81416 37 100.0 36 ..................................... ACCGTGCGGCGCTGCGCTTTGTGGATGTTCCAAGCT 81489 37 100.0 36 ..................................... CTTCTGAAACAGTAACAGACAAGATGTGGATACCAT 81562 37 100.0 36 ..................................... GTCCTATACTGGAATCACGTAAAACCCTTGCCGTCG 81635 37 100.0 36 ..................................... TTGCTATCTGTGTACGTAACAACATTGCCCGATTTA 81708 37 100.0 36 ..................................... ACACGATCAAAGCGCAATTTCCGAATGCGGCAGTCA 81781 37 100.0 35 ..................................... ATGATGACCTGCTTGGTTGCAGAAGTAGTCACGAA 81853 37 100.0 35 ..................................... TGCATGTGGGACACCGGCGGTTTTCTATCTAAGGA 81925 37 100.0 36 ..................................... TCAGGCTCTTACACCTACTCCGCGCCTGACGGGATG 81998 37 100.0 35 ..................................... TCAAAAAACTTGATACTCCGACCATCGAAAATCGC 82070 37 100.0 36 ..................................... ATTTCAGGATCTTGCTGACGACAAAGCGGCCAACCT 82143 37 100.0 37 ..................................... GCAACTGACGCAGAAATCTATCTATGGAAACTTTTAC 82217 37 100.0 35 ..................................... TGTTGCACAGGCGTTGGCAGGAAAGCGCAGTGATA 82289 37 100.0 37 ..................................... CAAGGGCATGTTTATTGGACAGATGTTCATTGAGGGA 82363 37 100.0 35 ..................................... CGATCATCTTCAACTTTCAGCGTGCCGTCCCCGAT 82435 37 100.0 36 ..................................... TGCCAGACGACGCCAAACTCGTCCTCAATTTTCCTG 82508 37 100.0 36 ..................................... CGAAATTCTACTTCTGGGGGCGCGTCCCGAAGAAAG 82581 37 100.0 35 ..................................... ATCGCGCATATCTTCAATAAAGCGCTTCATCTCTT 82653 37 100.0 37 ..................................... CTGGAGCAGGGTATCCTGTGACACGCCAAGCTGCATG 82727 37 100.0 37 ..................................... GATATCCACGCCGCTTTGTTGTCCCTGGCGGCGTTCA 82801 37 100.0 37 ..................................... AATACTGACATCTATCGGGGGCGGACGACCAGTCTGC 82875 37 100.0 36 ..................................... GCTTGAACCTGGTATTTCGTGAGGAGGTAGTCATGT 82948 37 100.0 37 ..................................... AGTGTGGGCGGATGACATGGATGAAGTGAGGCTTTTA 83022 37 100.0 36 ..................................... TACGTGAATCGCTGGCGAAGGCTGCCGAGAAAGCCA 83095 37 100.0 38 ..................................... CCTTTATTCCCATCCCATCAAAACACAACAGGGTACAT 83170 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 41 37 100.0 36 GTTGCATCCCCCTCGATCCGTTAGTGGATACTGAAAT # Left flank : GCGCGCAGGGAACGTATTGAAGAAAATTTCCAGGTTTTTGACTTTGAACTCACCCCCCAGGACATGGCCGCTATCGCCGCTCTGGATACCGGGCGCAGCCTCTTTTTTGACCACCGCGACCCTGAGGTTGTGAAGTGGCTGGCATCTCGTAAACTTCCAGTTTAGCCGAGGTTGAGGCGTTGCTTCCCTTTTCTAATACTCCGCCGGTAGAAATCTTTTCTACCGGCGGAGGTTTGGTTCATCAGACGGTCGTTTCGGCGATCTATGCGGAGGCAGGTTGTGAAAGCAGTGCGCCTGCCTGTTTGGTTTGTGGATACGCCAGACAGGAACAATGGTTTACCCTGGCGGGATTTTCGCAAATCTCCCCGGTTTTTAAGCAAAAAACGGTTTGCGAAAACTATTCCGAAGCCCCAGAACAGTGCCCCTTCAGAATGGCCTTAAAATGCCTGTAGAGGCTTGAAAATGGTTGTATAATAGGTTTTGAGGTGTAAAAATACGCA # Right flank : TTTTACAGCAGGTTTTACTAATTTCACTATCTCTACGTGTTGCATCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCATCCCCCTCGATCCGTTAGTGGATACTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 84741-87120 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967967.1 Anaerolinea thermolimosa strain IMO-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 84741 37 100.0 36 ..................................... GATGAATTCACCTGCAAGACTGACCATCGTGGGCAA 84814 37 100.0 36 ..................................... TTGATCACCACGCTGGTCGGGCTGGCAAGATTGCCC 84887 37 100.0 35 ..................................... ATGAAGTCAAGCAGACCCAGGTGGTCAACGAAGGC 84959 37 100.0 35 ..................................... GTCATCACAGTTATCGTCAGGCTCATGGAGCCGTC 85031 37 100.0 36 ..................................... CTCGAATGGGCGGAAGCGTTGCGGAAAGCCGGCGTT 85104 37 100.0 37 ..................................... GTCAGAATCTCGATGGTGTAAAAACCACCTGATACTG 85178 37 100.0 36 ..................................... CGGAGCGTGAGCTGGAACGCGCACGAGCTGCTCCCG 85251 37 100.0 36 ..................................... TCTGAAGGATGGGTCATACAAAGTGACCCACCCGAT 85324 37 100.0 38 ..................................... CGTGCGCAAGGTGCGCGCGGTCGTGGACAATTACCTGA 85399 37 100.0 36 ..................................... CGTTTTGTTTATTCTCGACGACGACTTTGTCGTCGT 85472 37 100.0 36 ..................................... GGGATATTATTATCCGGAAGAAAGTCAAAAAGGTTG 85545 37 100.0 37 ..................................... GGCAAAAAAAGGCAAGGCCCGCGAAGCGCGCAATTTC 85619 37 100.0 37 ..................................... GCTAGAGATTGCGAAGTATCTCCAGCAGGCGGGATAC 85693 37 100.0 37 ..................................... GTGCAGTCTCCCCGCAGCCTGGAGCAGTCGCCCCACA 85767 37 100.0 37 ..................................... GCATTACGACTACGTTCTCCTCATATGACACAACATC 85841 37 100.0 37 ..................................... TGTACTCGTGCACAACGTGCCTTGCGCGCGCTTATAT 85915 37 100.0 35 ..................................... ATGATTGTTTTTCAACATCAGGGCGGCACGGATGT 85987 37 100.0 36 ..................................... GCACGAGCTGGCATGGACTGAATCACGCACGAGCTG 86060 37 100.0 37 ..................................... GAAACATCACCAGGAGGCACAGCGTCATGAAATCAGC 86134 37 100.0 35 ..................................... TAAATTGAATTGCGCAGCTTAATCGGAAAAGTCCC 86206 37 100.0 37 ..................................... GACGATAAAACAGCTGAACATGGGTTCCTCCTTAAAA 86280 37 100.0 38 ..................................... AATGGTAAATCTGGAAAATCAGAATTTTGTGATTCTTT 86355 37 100.0 35 ..................................... TGGACTTTTCGTCATGAACAGTCAAGACATTTAGC 86427 37 100.0 35 ..................................... GTTGAACTGGTAGCTTATGCAACGGATTATGAATT 86499 37 100.0 36 ..................................... AGAGCCGCAGCTTCAGCTTCCAGTTCCAGTTCCATT 86572 37 100.0 36 ..................................... AGAAACTATTCAGCTTGCCAGAATCTCACTGAGGAA 86645 37 100.0 37 ..................................... TTTTCGTCAAACTCGATCTCTGACAGATCAATCAGCT 86719 37 100.0 35 ..................................... TGCGGATGGCCTCGATCTGTTCCTCGCGCACTTTA 86791 37 100.0 36 ..................................... CGAACTCTGGATGAGCCCTAAGCTCAATCGCGGCTC 86864 37 100.0 36 ..................................... ATATTAATGACGAAGAAGACGCGAATCTATACGATT 86937 37 100.0 36 ..................................... TTCCTGGGAGGAAAGAGTGGTATCGGGCACGGGAAA 87010 37 100.0 37 ..................................... TTCCTCTGGAGAAAACTCTGGAGGAATTAAAAATCTG 87084 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 33 37 100.0 36 GTTGCATCCCCCTCGATCCGTTAGTGGATACTGAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTATAATCATCTTGCCAGTTCTGTTTCAATCCAATCTGGCCGTCATCCTCCGGATTCACTGGCCGTTTTCACCGGAATATGCAAGTGGATACTGAAATTTATCTCGAACTCTTCCATACTCATCTTTCTTACTGT # Right flank : TGGGATTTTGTTATATAAATAAGAGTATGAATAGAAAATGGCTTAAAACTACCAACCCCATTTTCCCCGTTATCCTTTCATTCCTCTGGCTCGCCCTTTTAATTGGGCTGGGATACTGTCTTCTTTCGGCAATGTTTCAACTGTTCCTTTAAGCCGGAATTTCCCCTGTTTCTGCTGTTTTCATAATCAGGTTTATAAACCGCACAGCGCAGGGTTGGTTCGGGAGTGGCCTGCCATGCAGTAAGGGAAGCCCCTATTTTACGCGGTTTTCCGTTCAGGCCGAATGCGATGCCTGCCACCGGGTACTTCGCCGCGAGGGGTTCGGCGGTTAACCGGGGCGGGCCTGACCTGTGGTTGATCTCCTGCCCGAAGAAGGCGGCGATCCCTGGAGATGGGTGATCAGGCGGGTTGGAGCAGGCGTTCAACTTCCTCAACTTCAGAGGGGGTGAGCACCCATTCGGCGGCTCTGGCATTGGCTTCGAGCTGTTCCAGGCGGGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCATCCCCCTCGATCCGTTAGTGGATACTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //