Array 1 1494078-1483173 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP012322.1 Bifidobacterium angulatum DSM 20098 = JCM 7096 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 1494077 29 100.0 32 ............................. GCGGCGATACACACCATAGACGACACGCTGCT 1494016 29 100.0 32 ............................. ATGCTCTCAATCTTCAAAAAAGAGAATCTCTA 1493955 29 100.0 32 ............................. CAACGGCGCGCTTACCAAATCACGGCCATATC 1493894 29 100.0 32 ............................. GGATGTGCTCGGAACTCCTGCGCAGCCCCCTC 1493833 29 100.0 32 ............................. ACGGCCATCCGGTACCGGTAGGTCGTGTCGCC 1493772 29 100.0 32 ............................. GGCCTGCCTGTAGCAGTGCTCAGCGCCTGATA 1493711 29 100.0 32 ............................. GCTTACGCGAAGGCCACCGAGAAGGCAGTGCG 1493650 29 100.0 32 ............................. TTGTCGTGTGCGTGTTGCCTTTGGAATCGGTC 1493589 29 100.0 32 ............................. GGTAGAATTGACTCCATACATATATACCTCCT 1493528 29 96.6 32 ............................T TGTTCGGCAACGGTGACGTTTCGCTGACATTC 1493467 29 100.0 32 ............................. CAATGACAACCTACACCAAGACAGACAATTAC 1493406 29 100.0 32 ............................. GGGGTGGTGTTAGGGAACGTCTGGAACATGCC 1493345 29 100.0 32 ............................. CGGTGGGGGAAGAAGAACATGCCGCCGTTCAC 1493284 29 100.0 32 ............................. GCTTAGGCGTGAAGGTGCAGGCTATCGGCTAT 1493223 29 100.0 32 ............................. TTCTTTTTCGTGACCACGTTCAAACGGTATCA 1493162 29 100.0 32 ............................. GGTTGGTGGCCGACGTGGCGGGCGAGATAGAC 1493101 29 100.0 32 ............................. TCGATCCACGATTGCTCGATATTCGAGTAAGT 1493040 29 100.0 32 ............................. GGTGACGTTAGGCCGGTGCTTCCGCGTCGACT 1492979 29 100.0 32 ............................. TTCTAGGCCATGAATCGGTTGAGACCACGGAG 1492918 29 100.0 32 ............................. TACCCACGAAAGCATGAGGGAAACCGGAAACC 1492857 29 100.0 32 ............................. GGTGACGTTAGGCCGGTGCTTCCGCGTCGACT 1492796 29 100.0 32 ............................. CGCATTGGCCTTACCGTGATGGCGCAGAACGA 1492735 29 100.0 32 ............................. GACATACAGAACACGTGGAACGCGTTCTATCA 1492674 29 100.0 32 ............................. GGGCTGCTGCTAGCACGAGGACACGCACCACT 1492613 29 100.0 32 ............................. GGTTGGAAGCTTTTGACGGGAAAGGAATTGGA 1492552 29 100.0 44 ............................. ATGATGATGGATTTGCATGGATACGCGCAGGCCGCGCCGCTCTA 1492479 29 100.0 32 ............................. GTGAGCTTCAATGTCTCCGCATCCGCCTGTTC 1492418 29 100.0 32 ............................. CCGCTCAGGCCGAGCTCGCGGGAGGTCAGGTC 1492357 29 100.0 32 ............................. AGGAACGAAGCGGAACTGCTCGACATGTCCGA 1492296 29 96.6 32 ............................T TGAGTCCATACATATATGTACCTCCTATCTCT 1492235 29 100.0 32 ............................. GGGTATGCAGTCACCCACATCACACTCCATAT 1492174 29 100.0 32 ............................. ACGCGCTGAAACACGGAAAAGCCCCTCCCCCC 1492113 29 100.0 32 ............................. TGTCCGTGTTCGGTGCGCGCGTTAATCAAATC 1492052 29 100.0 32 ............................. GAGAGCAAGACCTTCAACTCTAACGCGCCCCA 1491991 29 100.0 32 ............................. GAGCTTGGTAACGCTTGCTTCATCGATACTGG 1491930 29 100.0 32 ............................. TACACCGACGAACTCGGGGACAATCTTGCCGA 1491869 29 96.6 32 ............................T CCGCTTGGCCGACACAAGATCGCCGGCATCCA 1491808 29 96.6 33 ............................A CCACATGGGGGCGCTCATATCTCGACCGCGGAC 1491746 29 100.0 32 ............................. GGTTCCGGTCGTTCGACGGTTTCCTGCCGTTC 1491685 29 96.6 33 ............................A CAAGCTTACCCGCGAGAAATTCCCGGAATTGCG 1491623 29 100.0 32 ............................. CAATGGCCGTAACCTGATAACTAACCCCAAGC 1491562 29 100.0 32 ............................. ACGCCATGCTCTTTCAGGACGCGGAAACACTC 1491501 29 100.0 32 ............................. TTCCTGTAGCGCTTCTTGTCGAAGCTCATGTT 1491440 29 100.0 32 ............................. TTGCCGATATGCTCCAACGTACTCGCCATGTC 1491379 29 100.0 32 ............................. GATGCGCAATACATGCGTTGTTGTCGCAAGAT 1491318 29 100.0 32 ............................. CGGTAACGGTTTGCGTGACAACGTTGATGCTT 1491257 29 100.0 32 ............................. AATGCATTAACCCAAGCACAGACCAACGCAGC 1491196 29 100.0 32 ............................. GGAGAAGCCGCCGTGGGTGATCGAAACGGTCA 1491135 29 100.0 32 ............................. AAGGCACACGCTTCTGCGCCATCCACACACAC 1491074 29 100.0 32 ............................. GGCATATGGGGCGTATGGCGTACCCCTGCCAC 1491013 29 100.0 32 ............................. GGGACGCGCACCGTCATGCCGTCCTCCGTCTC 1490952 29 100.0 32 ............................. TGCGTGGTGCCATAAAGGGTGTCTCGCACCTG 1490891 29 100.0 32 ............................. GACGAAGCCGCGTGGCAAGCGAAACTATATAA 1490830 29 100.0 32 ............................. CGGCGGCGCGCTTACCAAATCACGGCCATATC 1490769 29 100.0 32 ............................. CGTTTGGTTAACTCCAATATTACCCGTTCGGC 1490708 29 100.0 32 ............................. ATCAACTACACCGGCCTTCCATGCGCCACGAC 1490647 29 100.0 32 ............................. CCGCGAAAGAGTCAACCAGCGTATCCAAACCC 1490586 29 100.0 32 ............................. TCACCAACGCCATCAACAATCTAAGCGCGGAC 1490525 29 100.0 32 ............................. CGATTATGCCACCAAGCAGTACGTCAACAGCA 1490464 29 100.0 32 ............................. GGGGTGGTATTAGGGAACGTCTGGAACATGCC 1490403 29 100.0 32 ............................. ACCAACCGTGATATCTACCGCGAACTCGCCGT 1490342 29 100.0 32 ............................. ACTATTAGGCAAATAGAGAGGATATGACCATA 1490281 29 100.0 32 ............................. AGCCCGGCATCAGGATGCACCGGCGCTTCGGC 1490220 29 100.0 32 ............................. GCGAACATCGATCGGGTCACGAAACTGCCGGA 1490159 29 100.0 32 ............................. GGGCATGAGTCCGGTCGGACTGGTCAAATCCC 1490098 29 100.0 32 ............................. TTGAGGGGCGACGCGTCATCGCCCGGTTCGAC 1490037 29 100.0 32 ............................. TCGCCGGTGAGGATGCGGCAGGTCCTCGGGTC 1489976 29 100.0 32 ............................. GGAAACGTGGGCGCTCACCGGCTCCATCAAGG 1489915 29 100.0 32 ............................. GGCGGCGGGGGAGGCTCGTCATCCGGCGGCAC 1489854 29 100.0 32 ............................. AGGTGAGACAAATACAAGCCATCTACCTCAGG 1489793 29 100.0 32 ............................. TCGCCGGCCGAACGGTATTGGCCACCGATGAC 1489732 29 100.0 32 ............................. GGCGGCGACGCGCGACCGCATGGCGACGGATG 1489671 29 100.0 32 ............................. GCGAACCCCATCGTCATCGTCATCACCGCGAT 1489610 29 100.0 32 ............................. TGTTCTGGGTTGGCGGCGATGCGGTCGGCCAT 1489549 29 96.6 32 ............................T ACGAACCCTCACACAACGTGAGGGTCACATTC 1489488 29 100.0 32 ............................. GCGATGGGCGCGATGACCACGCGCATGTCCAG 1489427 29 100.0 32 ............................. CCGTCAGCGAGGCTGGTGCTTCCGGCCATGCT 1489366 29 100.0 32 ............................. CCGGATACACGCAGAACAGCTTCAAATACCCG 1489305 29 100.0 32 ............................. ACGAAACACGCCGCGATGCCATTGGCGATATG 1489244 29 100.0 32 ............................. GTCAGGCCGTTGCCGCTCGTGAAGTCGGCCAT 1489183 29 100.0 32 ............................. TGCTTATGCGCGTGATCGCCGTGGAATCACCG 1489122 29 100.0 32 ............................. GTTACGGGATTGTCAACCCCGCTCCACATCAT 1489061 29 100.0 32 ............................. GGCCTCGTGCTGTTTTACCCCGACAAGCGGCA 1489000 29 100.0 32 ............................. TCGTCACGAAGGTAGGGGAAGTTGCGCATGGT 1488939 29 100.0 32 ............................. GTCGATTATGTGATCGATAAAGCAAACCAAAT 1488878 29 100.0 32 ............................. TGTGCCATCTGCATCTTGATCCCGCCGGTTCC 1488817 29 100.0 32 ............................. TTCGCCGGCATCGACACCGCCAACGTCGAAAA 1488756 29 100.0 32 ............................. TGCAAATCTGCCGGTTTCATGTCCAAGGGCAC 1488695 29 96.6 33 ............................A CTCTGTCCGGTGGTCAGGTAGTCGCCCGCGTCC 1488633 29 96.6 33 ............................T AGGGTACTGATCTTTACGGTTCATCTCGTAGAA 1488571 29 100.0 32 ............................. CGCAAGCACCCGCAGACCAAGCACTATCTACG 1488510 29 100.0 32 ............................. GATATTCAGAACACTTGGAACGCCTTCTACCA 1488449 29 100.0 32 ............................. AAACGGCGGGCGTCAACGTAATTAAGCAAATC 1488388 29 100.0 32 ............................. ACGCCTTGCGCAATGCGTAGGATTTATAATTC 1488327 29 100.0 32 ............................. CCCTACTTCGCCAAGTACAAGCTTGATATCGG 1488266 29 100.0 32 ............................. GTCTGAAACATGCCTGTGATATCCGCCGAATC 1488205 29 100.0 32 ............................. CGCGACCAAGGCCGGTGCCGCCAAGGCCAAGT 1488144 29 100.0 32 ............................. AACGCCTACGCTCAGGCGCAGGTGGGCACGCA 1488083 29 100.0 32 ............................. AACGCCTACGCTCAGGCGCAGGTGGGCACGCA 1488022 29 100.0 32 ............................. AGGCTAATGAGGAAAACATTGTGTATCTGCGG 1487961 29 100.0 32 ............................. GGGTCGTCGTAATGCGCCAGCACATCGGCAAG 1487900 29 100.0 32 ............................. AAGAAAAGCCTGAGCGCGGTGGACCTACTGCC 1487839 29 100.0 32 ............................. CTGCGACAAGATGACTCTTAGCAAAGGAGGAT 1487778 29 100.0 32 ............................. TGCTTCACCCTCTGCACACGTCTACCGTCCTT 1487717 29 100.0 32 ............................. CTGTTCAGGTCGAGGCGCCCGGACCAGCCGCT 1487656 29 100.0 32 ............................. TGGTCGGCGAGTTTTCCGGTTGCGGTGGTGGT 1487595 29 100.0 32 ............................. TGGGACGAAGCGCCCTCGATGCGGTATGCAAT 1487534 29 100.0 32 ............................. CATCATGGGCGATACGCACATCATCGCTGTCG 1487473 29 96.6 32 ............................T CGGCTGCGGCTTGGGCGGACCGGGCGGCATTT 1487412 29 100.0 32 ............................. AGCCGATACTTAGGAAACATGACAGATTATAG 1487351 29 100.0 32 ............................. TGGTACGACTGCCACACGTCCAATTGGATATT 1487290 29 96.6 34 ............................T GCAGCAGCACGTCGAAGATCTCCGGGTTCGCCTT 1487227 29 100.0 33 ............................. ACGTATGACAATTTTGCGTGTGCGTGCGGTTTG 1487165 29 100.0 32 ............................. CGTGTAAGCGCTATGGAAAAATCACTGGCGGC 1487104 29 100.0 32 ............................. AGAAGGATTGTCAGACACGATACCATTATTTC 1487043 29 100.0 32 ............................. TACCCCATGACCATCTGCTCGCTGGGCGTGAC 1486982 29 100.0 32 ............................. ATGGCGAAAGAGACGGTAATCTCACGCACCGG 1486921 29 100.0 32 ............................. ACCAGGAACCAAACAATGAATGACAGCACACT 1486860 29 100.0 32 ............................. CGGTCGTAGTGTGCCTGGGAACGATAATAGAG 1486799 29 100.0 32 ............................. CAGGGCAAGCTCACCATGACATCCACCGAACT 1486738 29 100.0 32 ............................. CATGTCCTCGACGGACTTCCTACGCCCGTCCG 1486677 29 100.0 32 ............................. GATGTGGAAGAACTTGGGGATGGCATCAGGGA 1486616 29 100.0 32 ............................. CGCCAGAAGGAGCCTGATGGGTTGCGCTGGTG 1486555 29 100.0 32 ............................. CGGATCGCCGCCTGTCTCAGTTCGGGCAGTTC 1486494 29 100.0 32 ............................. TCGACGACGAGAAGGCGCTCAAGACATACGCC 1486433 29 100.0 32 ............................. CGCATGCAGGCATGACCCGAGGCCGTCACGGA 1486372 29 100.0 32 ............................. GATTTCGGCTCGGGCTCGCCGCCTTCGCCGGA 1486311 29 100.0 32 ............................. TGCCAGCGTGCGGTTTTGGACGTGCCTTCCGT 1486250 29 100.0 32 ............................. CGTGCATCGAAGAGGCATGCGAGGGGCGGAGC 1486189 29 100.0 32 ............................. GACGGCCCGTGCGAAAGCCTCGAGGCGTTCTA 1486128 29 100.0 32 ............................. CTCATGGTCCGCCCGGTGTACGGGTCGTGGAA 1486067 29 100.0 33 ............................. GATGAACGAACCCACCGCACCAGACTGGAACCA 1486005 29 100.0 31 ............................. CGCTTCCGCCGGCCAGGGCCGGGTGCGCTTC 1485945 29 100.0 32 ............................. TACCTCCCAACGGGAATATGTCTCGTGTGTCC 1485884 29 100.0 32 ............................. GCGCTGCCGGTGGACAGGATCATCAAAAGAGC 1485823 29 100.0 32 ............................. GCCAAGCCGGGCGGCGGACTGCCAATCGATTG 1485762 29 100.0 32 ............................. CAGCAAGACACTACAAGAAAACCACCACAGAC 1485701 29 100.0 32 ............................. TTACCCAGACAGCGAATTCCATTAAATCTCAG 1485640 29 100.0 32 ............................. CAGCTGCAGAATATGGATGTCGGCACCTTCCA 1485579 29 100.0 32 ............................. AGTGGACAACAAACAAGGCTATATCAAGACAC 1485518 29 100.0 32 ............................. CTGCTCGTCAACAGCGACTTCAGCCAGGGCAC 1485457 29 100.0 32 ............................. GGTCGTGCAGTGGGCTGCCGACGCCTGGGCTT 1485396 29 100.0 32 ............................. CTGCTCGTCAACAGCGACTTCAGCCAGGGCAC 1485335 29 100.0 32 ............................. GGTCGTGCAGTGGGCTGCCGACGCCTGGGCTT 1485274 29 100.0 32 ............................. AGGCCGAGAAGACCGACGACGATACCTTGCAG 1485213 29 100.0 32 ............................. TGCGCGACCTTCAAAACACCTTGCATGACCTC 1485152 29 100.0 32 ............................. GAGAGGAAGAGAATGGAGGGAAGAAGAATCAT 1485091 29 100.0 32 ............................. CAGCCTCGGCAAGGAATTCCAGACGCTGAAGA 1485030 29 100.0 32 ............................. TGGTGGGGAGCTCCAGGCAGATCATGTGGGCC 1484969 29 100.0 32 ............................. CCGGGTGGGTTATGCACAATGCTTGAAAAGGG 1484908 29 100.0 32 ............................. GGACGTGTTCGTGGCATCCACATCGACGGCCG 1484847 29 100.0 32 ............................. GTTTCGGTCGGAGCCGCGCCGTCGATAACAAG 1484786 28 96.6 32 .....-....................... ACCTACGGCGGCTACACCACCCTGAGCCGCCA 1484726 29 96.6 32 ............................T GTGGATGCGCCCGTGGCTGGCATGTTGGATTT 1484665 29 100.0 32 ............................. ACTGAGGGGCAAGTCATGTGTGAGAAGTGCCC 1484604 29 100.0 32 ............................. GCGCCCACGCACGTAGCACACAACACGCCAAA 1484543 29 100.0 32 ............................. CGTCATCCGCAGATCGACCAGGGCACCACCGG 1484482 29 100.0 32 ............................. GCGATGAAAGACGGCAAGAGGAACGAAGGCAA 1484421 29 100.0 32 ............................. GCGATGAAAGACGGCAAGAGGAACGAAGGCAA 1484360 29 100.0 32 ............................. TCGGCGACCTTCCAGGCAAAAGTGTTATCTGT 1484299 29 100.0 32 ............................. GGTGATGCACGACGAGATCATGGCCGCGCACA 1484238 29 100.0 32 ............................. AGCACCAAGAAACGGCTTAAGCCCCTCCAAGG 1484177 29 100.0 32 ............................. GGTGCGGTTGGACCCGTCCTGCGCCTGGTAGG 1484116 29 100.0 32 ............................. CATTCAATAGGCCGTTAAGAATCGCGCTACCT 1484055 29 100.0 32 ............................. CGTGAGGTGCACCGGCTTCGACGGTGCACAAC 1483994 29 100.0 32 ............................. GAGTTGTGCAATCTTCTGATTCCCCTCGTGTC 1483933 29 100.0 32 ............................. GCCAAGATTCAGGCTCAGCGTTTGGTCGAGAT 1483872 29 100.0 32 ............................. CCTCCAGGTAAACCCTCCATGTGAACCCTCCT 1483811 29 100.0 32 ............................. GCGTAGGCGGCCGTCTCGGCACTGAAGCATGT 1483750 29 100.0 32 ............................. CGCATCAGCCGCCAGCCGGCCGGACCCGTCTA 1483689 29 96.6 32 A............................ CGTGAGGTGCACCGGCTTCGACGGTGCACAAC 1483628 29 100.0 32 ............................. GAGTTGTGCAATCTTCTGATTCCCCTCGTGTC 1483567 29 100.0 32 ............................. GCCAAGATTCAGGCTCAGCGTTTGGTCGAGAT 1483506 29 100.0 32 ............................. CCTCCAGGTAAACCCTCCATGTGAACCCTCCT 1483445 29 100.0 32 ............................. GCGTAGGCGGCCGTCTCGGCACTGAAGCATGT 1483384 29 100.0 32 ............................. CGCATCAGCCGCCAGCCGGCCGGACCCGTCTA 1483323 29 96.6 32 A............................ TCGGACGAGGCCGCGGCTGCCATCAAACGCAT 1483262 29 100.0 32 ............................. AACGGCGGCAACTGGTACCCCGTCGCCAACAG 1483201 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================ ================== 179 29 99.7 32 GTGTTCCCCGCACACGCGGGGATGATCCC # Left flank : ATGTGGGTTTGTGGGATGAACGGGTAGGGGAGGTCTCTGCTGGAAAATCCTATGGTGACGATGAATGGGACGGCGGCGAATGGTAGTGATTGTGCTGACGGCATGCCCAATCGGTTTGCGAGGAGATCTTACCCGTTGGTTATTGGAGATATCACCAGGGGTGTTTGTGGGGCATGTCGATGCTCGAGTTCGGGAAAAGATATGGAAACGTATCGTTGAACTATCAAAAGATGGCCGTGCCATCATGGTCTATTCTGCGCGTAATGAGCAGCATTTGGCATTTAAGGTACATCGAGCGGACTGGAAGCCCACGGATTGCGACGGGCTGGAGTTGGTGAAACGACCTAAAGAAACGAAGGAAAAATCATTCGCGGGCACGCCTCGCCGAGGTTGGAGCAACGCCAGTAAATATCGGAAGGCAAAGAAATATTCAAAGTAAAACTGAATGAAAAATACTCACGTGATGAGAATGTGCCTTGATATTATGCTATTTTCTTAGT # Right flank : CTATGAGGATATCCGAATGCAGATGCTATGGGGTGTTCTCGTTGTCTATTTAGAAGTGCAACACCCTTGTTGGTCCTGTAATTCTAGCAGTTTGTCGGCGAACGCCTCGGCGGGCGTGCGGTAACCCAGCACGCGCATGGGCCGGTTGTCGGTTTCGTCGACCATCTCCCCGACATCCCCAGCCATATCCATCCGGATCCCGCTTCTTTTGGACGGATGCCGGCGGATCAAGCCGTTGCGGTTTTCGTTGCCTTCCCGCTGCCAGCTGGAGTACGGGTCGGCGAAATAGGCGTCCATGCCCAGCTCGTCGCGCAGGCGCGCGCCGGGCGAGCTCGGTGCCGTTGTCGTGTGTGACGCTGATTCTGGCGCCTTCGGGCATCCGGGGGAATATCGCCAGCTGCGCTCCGATGTTCTCCCCGGCGGTCTTGTCAGGGACGATCCGGGCCATGAGGAACCAGGTCTTCCGTTCAGCCTCGGTGTGCAGGTTGCATCCCACGCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //