Array 1 13343-11398 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZEX01000008.1 Chachezhania antarctica strain SM1703 scaffold8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 13342 36 100.0 30 .................................... TCCCACGGCCCCAGGCGGCGCTTGGCCATT 13276 36 100.0 30 .................................... TTTTCCTCACAGAACTTGATATAAGCCTCA 13210 36 100.0 30 .................................... TATCCACCGGGAACGCGGACGAACGCGCCC 13144 36 100.0 30 .................................... AAATCACTTTCTGCAATAGCGCGGTGGCTC 13078 36 100.0 30 .................................... CATCCTCTCCGCCCTCGACACACAGGGGGA 13012 36 100.0 29 .................................... ACGCCGGGCAAGGCGGCACCGATCGCCAA 12947 36 100.0 30 .................................... CGCCGCGCTGACCTTTGTGCAGCCGATCCA 12881 36 100.0 30 .................................... CGCCTGGGTGGTTCTAGCGCTGATCCCGGT 12815 36 100.0 30 .................................... CTGGCCACCGAAGGCCGGATCGAAGCGGCG 12749 36 100.0 29 .................................... GCCTTCGTCGTCGACGGGGCACCAGGTGG 12684 36 100.0 30 .................................... TTTCCTTGAAATGCTTGGCGATGATCTTTT 12618 36 100.0 30 .................................... ATGATCGGAAAGCATATCGGCGTGAAAGCA 12552 36 100.0 29 .................................... CTGGCGGGCACCGTAGCGGCGAACGTGCT 12487 36 100.0 30 .................................... GAGGAGCTGGAAGCCGAAGCGATCGCTGCG 12421 36 100.0 30 .................................... ATGCGCTGGATCGCCCTGTTGGCTGTCACT 12355 36 100.0 30 .................................... GACCTGGCACGCGTTCAGCATTACCGCTCG 12289 36 100.0 30 .................................... TTCTGAATTTCAGTGTCGGCAGTCTCTATC 12223 36 100.0 30 .................................... TGCGGCCACAAACATCCACTTCTTGAGCCA 12157 36 100.0 30 .................................... GAACACGACCGTGACCGTGACCGGCGTGTC 12091 36 100.0 30 .................................... ACAACGGCTTGACTGCCGTGATGGAGATCA 12025 36 100.0 30 .................................... GGTGAACATCGCGCTTTCGTCCCGGCGCAA 11959 36 100.0 30 .................................... GCCCAGAGAGATTTGGGCGGGCCAATTTGA 11893 36 100.0 30 .................................... CTGCCCCTTCAAGATCCGCGAAATGTGCGA 11827 36 100.0 30 .................................... CGACAAGTTTCCAGTGCCGCAGCATATGCT 11761 36 100.0 30 .................................... GCTTTTGTGAATGTTGCGCAGGCCGGCGCA 11695 36 100.0 30 .................................... TCATGGATTATCAAGGGTTTGTACTCACCC 11629 36 100.0 30 .................................... GGGAGGAATGGCGCCCCGGGCATCGCCGCG 11563 36 100.0 29 .................................... TACCGGAGGCGACAATGGTAAACTCCTCA 11498 36 100.0 29 .................................... CGCTCCCGAGTTGTTATGGCAATAGCTGG 11433 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 100.0 30 GTTGCGGCTGGACCACGAATTCTGAACGGCTATCCT # Left flank : GTGACCCCGGCAGGATTCGAACCTGCAACCTGCCCCTTAGGAGGGGCTGGGCTCCCACGCAAGACATGGCATTTTCAGCAATAGAACGGTTTTCTAAACAGTGATGTTCTCCGTTTGTGCAGGAGAATTCGGCTTCCGCAGGTTCAGCGAACCAAAGAGCATACCCTACCTGCCCTTCTTCACCTCTTCCAACTTTCGGATCGCCGTACGCAGGTCCCCCAGGGCAGAGTCGATAGACCCGCGCTGAGCCCCCCGCGTGCGCGCCAGTTCTGCAGCTGCGCCGCGTGCTTGCTCTAGCGCGGACTGTATGGGGTCACCGATCGTTGGCATGATCTATCCATAGTGCCATGCTCGCACCAAGCACAGCAGAAAAGGGCCGCGGAAAACGGAAGTTCGCCGCAGGCGCATGCTCATCGTAGGGAAATCGTTAAAGCTGCCGTTCAAACACCTCGGCAGAGATCCCGATTGAGGGTTTGCGCAGAGCCAAGAAGCGGCATGGC # Right flank : TGATCCACCCTCAAACCCCTGACAAAACAGGGGTTTGAGGGTGCGTCGAGTGGAGCAAAATGGGGAATCATCTTCAGAAAAGCGCCAGTTGCTCTGGATTCCTGCGGGCAGCTCGTCGGCCCTGATCCGAGAAGTGGACGATATCACGATACTGGCGATCAGTGAAGTTCAGCACCTGGATGTCGCCCTTCTCAGGCAGGTTCCGCTCAATTCGGCTCACCCTTGTCTGGAAGGCCTCCTTGCCGTTGACGAAGCGGGCATAGACCGAGAACTGGCTGCGCTCGAAGCCCTCGTCGAGCAGGAAATTGCGGAACTCGGTCGCGGCCTTGCGCTGGGGCCTGGTGTCGGTTGGCAGGTCGAACATCACGAGTATCCACATGATTCGGTATCCTGAGAGATAGGGCGCCTCGGCGTTCATGCTCCCAGCCCCGCAAGGGTGAGCGGGTCAGGCGGGGCGGGCAGGGCGAGCGCGAGCTTGCCGGTCTCGAAGCTCTGCCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGCTGGACCACGAATTCTGAACGGCTATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCGGCTGGACCTCGAATTCTGAACAGCTAAACT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //