Array 1 1424068-1422315 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134291.1 Streptococcus gordonii strain NCTC7868 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1424067 36 100.0 30 .................................... GGATTGTCATCTGGTCGTACATAAGTCACA 1424001 36 100.0 30 .................................... TCAGCTTTATCAACTTCACCTTCACCGTAT 1423935 36 100.0 30 .................................... TCCTTGAGCAAAGCGAATTGAAACGACTCT 1423869 36 100.0 30 .................................... CATTCAGATAGCCTTCAAATTTAGTCCCGA 1423803 36 100.0 30 .................................... AAGTCTATCAAGAGCAAGCTAACGAAATGC 1423737 36 100.0 30 .................................... ATGTTATTGATGTAGATGAGATGATGGCAG 1423671 36 100.0 30 .................................... ACAGGGTAGTCGTGACCTTCTTCTAGGTTG 1423605 36 100.0 30 .................................... TAGTACGTCACTACACTCTGCAACAGCGGG 1423539 36 100.0 30 .................................... TAACCAGCGTTTTTCTGCCATCTCCTGGTC 1423473 36 100.0 30 .................................... CAAACTAGAAAGTGGCCTGCTCATTTCATT 1423407 36 100.0 30 .................................... TCGTAGGTTTGGTATTTTATGTTACGATTA 1423341 36 100.0 30 .................................... CCGTAATTGTACGATTATTACAAGCAATCT 1423275 36 100.0 30 .................................... GGATATGTTTTAAAGGTGATAATAAATTGT 1423209 36 100.0 30 .................................... CACAATCCATTTTACATTTTATGCGTAAAT 1423143 36 100.0 30 .................................... CTTTCTTACCATGCTATACTAGAACCATAA 1423077 36 100.0 30 .................................... TCAATATCATCAAGTAAGATAGCGTTGATA 1423011 36 100.0 31 .................................... CATTGTTTGAGGGTCTACAGTAGTAGTAGTG 1422944 36 100.0 29 .................................... CGTAAACGGTAACCGCTTTGACTTCCTCG 1422879 36 100.0 30 .................................... TACAAACCCTTGAATCTGACCTCGGACTTG 1422813 36 100.0 30 .................................... TATTCACAAAGTTGTTGTATTCTTCTTTGT 1422747 36 100.0 30 .................................... CACATATGTATATTGATGGCTTCGAGTATC 1422681 36 100.0 30 .................................... GTCGGTGATAGTATGCCCGATTATTTAAAA 1422615 36 100.0 30 .................................... AAAACCTCTCCTACCTATTCCATCGACCTT 1422549 36 100.0 30 .................................... CCATTCCATTCATGGTTTTTGTTTCTTTGT 1422483 36 100.0 31 .................................... TAGGACCTTCAAGCACAATCACATCAAATGG 1422416 36 100.0 30 .................................... TAGTTGTAGACATGAAGTCTAAGCAGTTCA 1422350 36 80.6 0 .........................G.G..ATT.GG | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.3 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TGGACGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTGTTTCCTTCAAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTTCATATGAGTTTATCAATAGAGGATCAAGTAGTATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCAGTATTAAATTAGTCAATCCAATGTTATTAAAATATTTGGAAGAATAGTATTGACGAGTGAGTTTTAAGGCTTTATAATGTTTTTGAGATACAGAAACCAAAATTGACGAATTTGAG # Right flank : TTATGCTATACGAATTTATCCAAAAAACAACCACCTAAATAGGTGGTTGTTTCAGTATCTATCATTGCTTACTAGAAGAAGAACTTGAGTTGCTTGAGCTGTCGCTACTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTGCGTTGGCTGTAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAAGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTCGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGGGTATTGGCAGCATTACGAATGTCATCCAGTTCTTTCTTGATGGTTTCGTCTGGATTGGTAATTTCCTCACCGGTTTGAGTGTAGTAAGTCCGTCCGTTGAAGCTAGTGTATTTTGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //