Array 1 15412-16493 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWUL01000039.1 Sulfobacillus sp. hq2 C441, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 15412 30 100.0 36 .............................. CAATTCCCGCATATGGGGAATTATCGGATGAAATGT 15478 30 100.0 37 .............................. TCCGTCAGGGAGAAAAAGGCTGGTCTCAGGATGAGAT 15545 30 100.0 34 .............................. AAGAACAGTAATTCCGGGCGGATGCCCCCGCTGC 15609 30 100.0 37 .............................. AGAGCCATGGTCACTGTCTCTGCCGAACCGTCCCACA 15676 30 100.0 36 .............................. ATACTCCTCCAATTTTCTCTCTAACCACGCTAATAC 15742 30 100.0 35 .............................. CATACTTCATTCCATATCTATCAGGGATTTCGTCC 15807 30 100.0 35 .............................. TTCCAGGTGATCTCGCTGATTGTGGTTGTGGCGGA 15872 30 100.0 35 .............................. TTCCTCCTCCTTTTTCGCGCATGGTCCTAGCCATG 15937 30 100.0 35 .............................. TTTTTACGCGAAAGTCATGACGCCTCGGAACTGCC 16002 30 100.0 35 .............................. CCCCACCGAAGGGCTTCGCGCGTTGTGTCCATGGG 16067 30 100.0 35 .............................. ATGTTCCCGCCCATTAATTTGCGGCCTTCTTCTGC 16132 30 100.0 35 .............................. TTCCTTTAAGGCTTGAGGAAACGTGATCACAGACG 16197 30 100.0 37 .............................. CGGAGGAAGAAGTCCGCGAAGCCCTCGAACTCTTGAC 16264 30 100.0 35 .............................. TTCCCCCTTCAATGCCCCGCAATAGCACGTCCCAG 16329 30 100.0 35 .............................. AAAGGTAAATCAGGACGAGAAGCGATAGCCCAACG 16394 30 96.7 40 .................G............ TCAAAATCCTCTGTGGTGTTGTAATAAAGGGCTAAGTTGT 16464 30 80.0 0 .................G....GC.A.TT. | ========== ====== ====== ====== ============================== ======================================== ================== 17 30 98.6 36 GTTGGGATTGTACCTATAAGGGATGGAAAC # Left flank : GCCGAGAAGTTTCGGGATGAGGGGGAACGCTATGTTCCCCTCTTGGTCCTCGCTCGTACCCTCACCGAGGAGAGTCCGGACCCGACCGTCCGCGAGCTATGGGCAGATATTGACACTTTTAAGGCACTTATGGACGTGCGCAATCAATCCCTTGCGGCGCATGGCATGCAGCCAGTCACTCGGGAGGATGTTGCGAAGGTCCGGCCGATTCTCCGTAAGTGGGTCATGACCTTGGTGCCGGACACCGGGGAATACCTCAAGCTCTATCCGTTGACTCCCGCCATGCGCCAACGCGTGCTGCAAGATTTAGGATTGCCACCGGGTAGGGTATAATAGTGTCGTCGATGTCCAATCGGGCCAAAACTCCGGGAGATCGACGACAAAGACCATCGTACTCAATGCGTTGCTACGGAACGGTTGCGAGGTAAGAGTCTACGTTACTAGTAAAATATTCCATATTATCAAAGGGTTGTGTTTGGCGTGGCGTAAGGGCCAAAGGG # Right flank : CTACACAATGAGATGGACGACATCCTTTTAGGAAGGGATGTCGTCCGTTCATTTTGCTCATTCTAGGGCGGTTAGCGGAACAATAACATAACTCGACCTGAGTCATAGTCAATCCTGAACTATAGTCCCCGCAAAAATTTTCCCATGTTTACTTTCTGAGCAGAACCCCGGCTCCTGGCTGGCGAAATCTTGACTGGGGAAGAGAGGACGAGACAGGAGAGTGAAAAGTTTGGTGTGGCGACAAGCGGGATGGGGGGGATGAGGTACTGTGCCTAATCGTTCGAAAGATCCCTAGGCCGTGGAGCCTCGGAAACTGCCTTCTGGTCGTTGGAAAGGTCGTGTGGTGCGCTATGACGAGAAGGGCAAACGGCACGAACTGACGCAAACGTTTGACACGAAACGCGAAGTGAAGCAATGGGCCGAGTTAAGGAAGCAACTCAATAGCGAGATAATCCGAACCGGGAACCCGCCGAGTGAAGAGCCATTGGGAAAGTATTTCG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGATTGTACCTATAAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 179995-182429 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWUL01000048.1 Sulfobacillus sp. hq2 C493, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 179995 30 100.0 35 .............................. ATCGTCACTGATCATGATTGGACCCTTCTTCCTGA 180060 30 100.0 34 .............................. TGAGGTTAGAGAAGTACCTGCTACCATGCCAAAA 180124 30 100.0 35 .............................. CAAGGGCACAGCTCATCAAGCTGGCCAGGGATTGC 180189 30 100.0 38 .............................. ACGGATACTCGCCACATACGCCTGACACGCTACACAGT 180257 30 100.0 39 .............................. TCATTCTACCACAGCACGCTAACGCATTTCAACTGTTAC 180326 30 100.0 37 .............................. TCAAGGTACAGGCCACTGCGGGACTTCAGCCCGGAGG 180393 30 100.0 39 .............................. TGAGGCTCAGCGTATCGCCGCTGGGCGGGCTGGCAAATT 180462 30 100.0 37 .............................. ACACGAGATCCACGGGCTTATGCATCACGGCTTGTTG 180529 30 100.0 35 .............................. GGGTTCCATACTCGCGCTACATAAGCCGTCCGAAA 180594 30 100.0 37 .............................. TTCAGTACGGTCGCTGCCATGCTTTTAGATGGTATAG 180661 30 100.0 37 .............................. TCCAGATTGTCTATATAATGGGAATAGCCCCGGAAAA 180728 30 100.0 39 .............................. CCCGGCAAATGGGCCTCTCCCGCCAGGGCCTCAATAATA 180797 30 100.0 34 .............................. ATAGTGATAAAGCGTCCGCGTAGCAATATTCATA 180861 30 100.0 38 .............................. CCGTATCGACCGGAGAGCATGAAATCACCTTGATACCC 180929 30 100.0 35 .............................. GTCAGTGATACGGCCAAGAGCCAAGGCTTCTTCGG 180994 30 100.0 38 .............................. CTGTCAAGTAAACCCCTCCTTTTTATTCCTGTCGCCTG 181062 30 100.0 39 .............................. TTTGGGCCGGAAACGATAAAACCACCATTTATCTCGAAC 181131 30 100.0 38 .............................. TCCCGCGCGACACAGCATAAGATGCACGGGCCGGCCCT 181199 30 100.0 35 .............................. CCGGGCATTGCAAAACTACCGATACCTGGGCAAAT 181264 30 100.0 37 .............................. CAGCATAGAGACACTTCCAAGACACTTCCATGTGCCA 181331 30 100.0 39 .............................. AGATAATAGCCGAATTCGCGATCATACGATATGGCATGA 181400 30 100.0 37 .............................. GCCGATTCGAGACCATATTCCTGAAGCTTCTTTGCCG 181467 30 100.0 36 .............................. CACCACCTCCAGCCAGCCATAGTGCGGAGGCCGGAT 181533 30 100.0 36 .............................. AGCCAAGTACGGGCGCAGGTCAAACATGCGCTGTGG 181599 30 100.0 36 .............................. GTGGGCACGGTTTCAAAGAAGGAGGTGTCTGTCCCC 181665 30 100.0 35 .............................. GGAGGGTATAGAACATGCGTGTACAGATTCGGGAA 181730 30 100.0 36 .............................. TTGTTTGACGCGGACCCATATCGCAGACAGGGCATA 181796 30 100.0 39 .............................. CTTGCTCGCGAATCTCTTGCATCTCAGTATTAGTTATCC 181865 30 100.0 35 .............................. CTTCGTAAATCCCTTCTCTAACTTGCATCCTCATT 181930 30 100.0 39 .............................. GCCCATCAGCCTCTTAAGATCACCGCGGAGTTGCGAGAC 181999 30 100.0 37 .............................. ACCGTATCCATAGGGACGGACGAAGGAGAAGAAGAAA 182066 30 100.0 38 .............................. TTTGGCCACGGACACCGCCGCGTTCCGGGCCGTGATCA 182134 30 100.0 37 .............................. TCACCACACATACGACGATCGATACGACCATTGAACC 182201 30 100.0 38 .............................. GCTAATGCAATATCCTGACACTCAGAACAATCCTCAGG 182269 30 100.0 35 .............................. TGGTGCTGGTATTTACCGCATTCCCTCCTTTCTGT 182334 30 100.0 36 .............................. GATTTTTGAAACCCAGATTATAGAGGTGTCCCATGG 182400 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 37 30 100.0 37 GTTTGTAGCCTACCTATGAGGAATTGAAAC # Left flank : TTCCAGACAAGGGAGAAGTGCTCGAAGCGGACGTGACTAGTATCCCTGGCCCAAGCCCCCTTGAGCGCACGTGGCGAGCCGTCTACCATAACCAGGTCGTCCAGTGGCGAGCGCCACACGCTGCTCGCGAAACGACCGCTCAGGCCTTAACCCTTCTTCGCGCCCCCATTGTGTCCTTTACGTTAAATGACCATTGAGGTCCAGTTTTAGACCGTCAAAACCATTCTGAATCAGTTCATCCCATGACCTAGCATTAATAGACAAATCCCTTGTAGGCTAAATAACGATTTATCCGTGTCATAAGCGGCAAATTAAGCCTCAAACCTCTTACGACAGTGTCGTCGACCTCAAATAGCGCAAAAACCCTAGGAGATCGACGACAATTAAAAAAAACCGCAAATCCACGGTTGGTAAGGGATCTCACCGTTTTAAATGCTTAGAAGTATGGCGAAACTCAAAATGGACGACGTTGACATCCTTGATATCACGCGGCAAAATGG # Right flank : CGGTAATCGCTCTTCTGTATGGATCGGGAACTGTTCGGGTTTGTACGGCCTTCTGACACGTACCAACTTTCTACCCTTCCATTGTCGTCGTACTAGAGAGAGAGCGGAAACTCGCATTGGTATTCACTGAGGAAGATGAAGCACTTGCCGATGGAGCCATCGCCGAACGAATGCTAAAGAATCACACTTGCTCCCATTCGGAATCCCAAGCTCTTGCTATGCCACATGGGCGGTAGGATGGCTTCTAAGCTCACCGAAGGAATACGGACCGCGTTTAAGGCTTGGAGCGGTCGGCCCGTCTGAGTTTGCCAAGCTTGACCCATATCCATCAATAAAATCTTCGTCATCATTTCAGATTGTTTCCAAGAAGGCTGCGAACGCTAACTCCCTTGAAAAACGAGGACACATCGATTTTAACTGTTGTAGATGCCCTTCACCATTGTGCTTAGGGCACGACCAGCGTTATTGGCGCGTAGCAATAACCAACGTGGATTCGAGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 172699-173805 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWUL01000047.1 Sulfobacillus sp. hq2 scaffold16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 172699 37 100.0 35 ..................................... CATGAAGTCTATCAACAGCAGTCCGCTACGGACTT 172771 37 100.0 36 ..................................... CCTTTATGAAGCCATTACGATATTCCTATCCACATG 172844 37 100.0 35 ..................................... CTGCTGAACAAAGAGATAATGGACAGCGTCCCGGC 172916 37 100.0 32 ..................................... ATTGGATTGACAAAAATCTAGGCAGTTTATTT 172985 37 100.0 35 ..................................... CGGTATTTGGTGTCGGCAGCTAGCACGTTCAGCAT 173057 37 100.0 35 ..................................... CCGTCACCAGCGGGGAGACAATCACCGGCACTAGT 173129 37 100.0 35 ..................................... GATTCCCACGCCCGTAGCTTCGTCTACCGTCACAT 173201 37 100.0 34 ..................................... CCTACAGTCCCGACCACCACACCATTGGCCCCGA 173272 37 100.0 32 ..................................... ATTGGATTGACAAAAATCTAGGCAGTTTATTT 173341 37 100.0 34 ..................................... GGGTTTTCCCTTTGATCGTAGCCGAAAAGACCCC 173412 37 100.0 34 ..................................... CAAGTTTATGCCGTTTTGCGGTTTTTGGGGCGAT 173483 37 100.0 36 ..................................... TTCCCTGCGGATTTCACGAGGCTGGTGGTGGCCGCG 173556 37 100.0 35 ..................................... GCTGAGTTTTTGGGGTTTGATGTTTCCGATGTTCC 173628 37 100.0 35 ..................................... TTCGGCAGGGGGGCTTCCAATGCCGTGCGGGTTTT 173700 37 100.0 34 ..................................... CATACGGCGCCGCGCCTCCGTTACCGTCATCCCC 173771 35 86.5 0 .........................A...--..G.C. | ========== ====== ====== ====== ===================================== ==================================== ================== 16 37 99.2 35 GTCTCCCGGCACTAACCTGTCGGGAGTGGATTGAAAC # Left flank : CGATAGGAGGAGTGCACCATGGACATTATTGTTGCGTATGACATTGCTACGGAATCTCCTATGGGACGAAAACGCCTAAGGAAAGTGGCGCAGCTATGTTTGAATTATGGGCAACGCGTACAATACTCGATTTTCGAGTGCCGGGTCAGCGAAATAGAGCTGCACAAGCTCAAAACTTCACTCTTAGACGTGATTAGTCCTCGCGAAGACAACGTTAGAATATACCGATTGTCCGGACCGCATGATGAGTGTGTCTGGTCCAAGGGAATCAACCGGTACGTAGATTTCGATAATCCGCTCATTTTTTAGGTTCTAACGGGTGTGGTGTATAGTGCGCGAACCTATAGTGACCGTGGATTTTATGGAAGGTTCGCGCCTCTTGATGCGAAAGGGAAGAGACCTATATGACACCAAAACACTTAGGATTAAGAGGCCCCATTTTTGACGTTCGCGCATTACTAGGCAATAACGCAGACTACGGGCGACTTTCACGGCCCAGT # Right flank : CTATGCCAATAAAATGGACACCCGAAATTAAGACATTAGCTGGCTCGCGCCCGATACGCCGCCTCCGCTTCGGCTGGCGTGCGATCCCCAGGGCACTGTGGATTCGCTGCTGATTATAGAAAATCTCGATATCGGCAAAGATCGCGACTTCCGCTTCCGCCCGTGTTCGACATGTCGTCAGGTAAATCAGCTCCTTCTTGAGGAGACTGTGTCAGGATTCAATCATGGCGTTATCGTAACAATTTCCTATGCGACTTATGCTCGCGGTCATGCCGTATTGCTGAAGCCGTTCCTGGTACGCCGCGGCGGCCTATGGGCTGCCGCGGTCCGAGTGATGCAGCACGCCGGCGGGCCGCCGGCTGTGCATGACCGCGCGGTCTAAGGCCCGGATAACTCAGTCTTGCGTCATGCGCCGATCCACCGCCCATCCCACCATGTTTCGGGTGGACCAAGTCCTGAAGGCTCGCTCAAGAGAGCCATCCTTCCTCCGTGGCGATATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCGGCACTAACCTGTCGGGAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //