Array 1 1032600-1032807 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034298.1 Vibrio parahaemolyticus strain 20160303005-1 chromosome I, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1032600 28 100.0 32 ............................ GCGTCCCGAGTTTTTGGGCATGATGCACGACG 1032660 28 100.0 32 ............................ GCTCGATGCAAGTCGAGAGTTTTTGCAGGATC 1032720 28 100.0 32 ............................ GTCGTGAAATAGAACATTTTGAACAAAAGTCT 1032780 28 89.3 0 ...........CG..........G.... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 GTGTCCTGCCGAATAGGCAGCTAAGAAT # Left flank : TCTATGATGGTAAATGAAGGTTTATTTGAGATCTCCAATGTATTTGAGGTGCCAGATAATGCGATAGAGGTGAGGTTTACCCGCAATCAAACGATTGGGAAAAGTTTTCTGGGTTCCAAGAAACGTCGAATCAAACGTAGCATGGCGAGGGCCGAATTACTCGATGTTGGAACATCATTACCAGTCACTAATGAAGAGCGTATCGTCGATAGCTTCCATCGAATACCAATCTCCAGCGGTTCATCTGGGGAAGATTATATTTTGTTTGTACAAAAGGAGTTTGTTAGTGAGCGCGGTGCAGTAAACTTTAATAGCTACGGTTTAGCTACCAATCAAGAAAGAAAAGGCACGGTACCTGAGTTACGTTTTTAACCCTTTTTCTAAAGCTGTTTTTTAGAGAAATAAAAACAAGCACTTACAGAAGTACGAAGAAAAAGGGTATTTTGATGAATTGTGACTTTAAGCACGCAGAATCAGGTGGTTAGAGACTATATTCTACA # Right flank : TAGGTCAGGAAGAAAGCAACCGACCTGCTGAACAAGCAGTTAATATAAACCATCGAGTTTAGGCTTGGTGGTTTTTTGTTTTAAAGTCAGTGTGCTGAGCTCAGCCTCTTTCACACACTAAATTCAATAAGTGTTTTTGAGTATGATTTAACAACTATTCATACAGTAGGTAAAGTTACTCAATATTCTGGGGTAAATTAGCCTGCTATTGATATCAAGGTGATACAGTTTGGCTAGTCGACTCATAATACTACACTAGATAGCAGAAACCAGACTCTTTCCTAAAACAGGAACGCAGTCGTTATAACTAGTCATACAGTGGCTTTGAAACTGTTCTCTCCTTTTATTTTTGCGTAAAATATGCTCATAAAGTAAAAGGAATACCAAATGAAAAACAGATGGTTAGGTATGGCTTGTGTGCTTCCTTTATTGGTTGCGTGCAATAGCGAAAGTTCAGCAATTAAGGTGTCTAGCGAGACGGTCTCACAAAAGCAAATCGA # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCCTGCCGAATAGGCAGCTAAGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTACTGCCGTATAGGCAGCTTAGAAA with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //