Array 1 25600-25834 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ955280.1 Anaerococcus tetradius strain MJR8151 Scaffold78, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 25600 36 100.0 31 .................................... AAGAATCAATTTTGCAACCTACAAGAGGTGA 25667 36 100.0 30 .................................... TAAAAAAAACTCTCCAGTTCTTTTTAGATA 25733 36 100.0 30 .................................... TTGTATACTGTGTTATTATTTTGATAGGGT 25799 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 100.0 31 GTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAAC # Left flank : CAAGGCTGTAGGATTAGAAATTGATACAAAATTTACAGGCTTGATGGCTAATATAATTGAATATCTTGATATATCCCACAAACTTCTAAATAAGAAAATATTCTTCATAGTAGGAATTGACGATTACTTTGAAGAAAGAGAATTGTATGATTTAAATGAATATCTGTGCTATAATGATATTATAGTAGTTTGCTTACAAAATAGGTTAGATAGAGATCTTCTTCCTAATGAAAATCTTAGGATTATAGATGAAGATTTAGGAGAAATCTAAAAAAGTAAAGCCTCAAACCTCAAAAGTCGTTAATTTGAGGTTTGAGAGTTATGTAATTTAAGTAGTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTTATGTAATTTAAGTAGTAAGTAAAACTTCTTCCATTAGTACCATTTGATATATTAA # Right flank : CTCAAAGATTTTGCCTGTAATCCCCCTTTTTGTTTGAGAGTTATGTAATTTAAGTAGTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTATGTAATTTAAGTAGTAAGTAAAACTTAGAGTAATACTATCTACATCTACAATATGTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAACAAAAATTAAGATGTGGCAAAGATAAAACAAGTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAACTCATAGAAACATCATAAGATTTAGCATACTGTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAACAGTATAATCTATGGTCTTTTTTATGCTTCTGTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAACAAAGAAATAATTGTAATTCATAGAAGTGGTAGTTTGAGAGTTATG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTTATGTAATTTAAGTAGTAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 26289-26054 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ955280.1 Anaerococcus tetradius strain MJR8151 Scaffold78, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 26288 37 100.0 29 ..................................... GAAGCATAAAAAAGACCATAGATTATACT 26222 37 100.0 29 ..................................... GTATGCTAAATCTTATGATGTTTCTATGA 26156 37 97.3 29 ....................................T TGTTTTATCTTTGCCACATCTTAATTTTT 26090 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 4 37 99.3 29 GTTTTACTTACTACTTAAATTACATAACTCTCAAACA # Left flank : TAAATTACATAACTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTACTACTTAAATTACATAACTCTCAAACGAATTTAAAAGCTTCTTTTCCTTACGAACAGTTTTACTTACTACTTAAATTACATAACTCTCAAACCTTCTTGATTTAAATTACTAAAATAATCAGTTTTACTTACTACTTAAATTACATAACTCTCAAACGTGCCTTTACTGTAGGGAAAATCCATAAAAGTTTTACTTACTACTTAAATTACATAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTACTACTTAAATTACATAACTCTCAAACTACCACTTCTATGAATTACAATTATTTCTTT # Right flank : TATTGTAGATGTAGATAGTATTACTCTAAGTTTTACTTACTACTTAAATTACATAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTACTACTTAAATTACATAACTCTCAAACAAAAAGGGGGATTACAGGCAAAATCTTTGAGTTTTACTTACTACTTAAATTACATAACTCTCAAACACCCTATCAAAATAATAACACAGTATACAAGTTTTACTTACTACTTAAATTACATAACTCTCAAACTATCTAAAAAGAACTGGAGAGTTTTTTTTAGTTTTACTTACTACTTAAATTACATAACTCTCAAACTCACCTCTTGTAGGTTGCAAAATTGATTCTTGTTTTACTTACTACTTAAATTACATAACTCTCAAACTTAATATATCAAATGGTACTAATGGAAGAAGTTTTACTTACTACTT # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTTACTACTTAAATTACATAACTCTCAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //