Array 1 15061-15424 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRNJ01000025.1 Anaerobutyricum hallii strain AF45-14BH AF45-14BH.Scaf25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 15061 33 100.0 33 ................................. ATCTAACATACTAATTGTGAAAGGAGGGAATGC 15127 33 93.9 33 ...............................AG CCGTAGACATATAAATTTATGTCGATAATTATT 15193 33 90.9 33 ..........................T...AT. CTCTTTTCATGTGGGAGATTACATACAGTTTTT 15259 33 90.9 34 ..........................T...A.T TTTCAAGTTCTGCCGGGTCTGATGCATATCTCCC 15326 33 90.9 32 ....T.......A..................G. TAAAGACTTTTGAGTATGAAAAACCCCGGAAA 15391 33 90.9 0 ..............A...............TA. | T [15416] ========== ====== ====== ====== ================================= ================================== ================== 6 33 92.9 33 GTCGCATCCCTCGCGGATGCGTGGATAAAACCA # Left flank : CGGTATTTCTTCCGGCAGGGATTAACTTCATGTCAGTGGGGGATACCATTTCTCCGCCCACTTTTGTTAAAAGCAGGGATACCGGTTGTCATCCGGGAAGAGAGTTATACATCAAGAGCAAGCCTGCTGGATTTAGATGTTATCCCCACTTATAAAAAAGGCGATGCCACAAACTACACTTTTTTTTCAGGAAAGAGAGTACGCCGTGGTCTGTATAAAACATACTGGTAAGAATCATCACCCAAGAATAGAGAGTGTGAACCACCAAAAAATTTTCTACAGAAAAATAGAGTGACTTTAAATTCTGACATACTATATATGAGAAAGTTGGTGCGAATCGGAAGCAACGCAAGAATCCCGGGAGATTCGCACTACAAAAACAAAAAATATTGTTCTTGCTTTTCTAAAAAATAGAAATGTAAAAAGTTACAATATCAAATTTTTGTACAAACTTTCTAAATAAAACAGTGAAATTGTTACCAATTTTATATGATTTCGCT # Right flank : AAGAAACCATCATTATATTATAGGAAGGAGGACCGTCTGAAGGCGGTGGCGAGTTTCCTTAAGAGAGAGAAGAAGGATTTTCGCTTAAATTTTGATGAAAGCATACGGGTTTATACATACACATTCAGAATATTCATTAAAAGACGCTCCTCTAAAACTTGCGGATATTGTAAAAGAAGCAAAGAAAATGGGAGCTACAGCTATTGCTCTTACGGATCATGGTACTGCCGCTGGCTGGATTGAATTTTATGACTTATGTAAAAATGAAGGCATCAAACCAATTTTAGGAGTAGAGGCTTATATTCGGTCAGAAACCAACAGCAGAACCCATTTAATTCTTCTTGCAAAAAACTATACAGGATATAAAGAAATTTCTCAGGCGATTTCTGATTCTAATGAAAATATTGAAAGAATTGCAGACATGGATATTCCTATCATGACGAAGGAGATATTACAAAAATATCTGCATGGAGATAATGTTATTGTGACAAGTGCCTGTG # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATAAAACCA # Alternate repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.60,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 28904-29069 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRNJ01000010.1 Anaerobutyricum hallii strain AF45-14BH AF45-14BH.Scaf10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 28904 33 93.9 32 ..............A.................G GCAAGAAAGAGAAAAGAAACTGAAGGAGAAAG 28969 33 100.0 35 ................................. TCTACAAAATTGCTATAATCCTGTGCTGTAGTAGA 29037 33 93.9 0 ...........................G..G.. | ========== ====== ====== ====== ================================= =================================== ================== 3 33 95.9 34 GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Left flank : TTAAGTATTTTATTTCTTATTGTAACAAATATAGGCGGAGCAGACTGTCTCATAATGATTATAATGCCGTTATATATAGGGGTTAATGCCTTATATGCCATACTGATTGCTGTGATTGTAAGCATTCCTTATCAGATGCTTGTTCTAAAAAAACATAAAAACAAGGAATACCCATTTATTCCATTTTTAACACTTGGATATATTTTATCACTATATCAATTTTAACAAAAAATCTTTTTATAAAATCTGCCCGATGTTCTAAAGAGGTTAGATAAAAAAATTTATACAGAAAAATCAGTCAATCTGAAATTCTGACATACTATATATGAGAAAATTAGTGCGAATCGGAAGCAACGTAAGAATCCCGGGAGATTTGCATCACAAAAATATTGTTCTTGCTTTTCTAAAAAATAGAAATGGTAAAGATTGCAATGCCTAATTTTTGCATAAACTTTCTAAATAAAACAGTAAAATCGCTATCAATTTTACGCGATTTCGCT # Right flank : ATGGGGCGCGAAAAACTATATTATACACACTAAAAAAAGAAAGGAAGAAAAAAATGGATGGAATTATTATCAGAAAGGCAATATTACATATATTAGACAATGGAAATAGAGGGATTATTCTCTCAAATTCCTTATTAAATTTAAGAGATGAGGAGTTAGATTTTATTCATAATCTCATTGGAAAAATCCATGGAAACGATAATTCAAAACATGGAAAGTTTTATCCTGAAACAAGTCTTGTATATGAATTACTGAAAGAGATGAATGAAGATAAGGAAGAAAGTTTTATCAATACATCTCAAGAGATTGCCAAATTACTTTTTAGCTGTATAAACAACGCTTTAGATATTCCTTCTGGAGATTTAATGGTTTTAACCTATCAATTTGAGGGGCAGAGGTATCTTGCATTATTAAAATTAAATTACAAGAGTAGTTACACGCAGCGTATTAATCAATCTGATACTGGGGTTACAACTTCTTTAATTCAAAATACTACATTG # Questionable array : NO Score: 3.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 43500-42870 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRNJ01000028.1 Anaerobutyricum hallii strain AF45-14BH AF45-14BH.Scaf28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 43499 33 93.9 33 ............AT................... ATGCCACCCTGTTTGCTGGCTAAATTATATGCT 43433 33 100.0 34 ................................. GGAAAAACAACAAGCATGAGAAATCTTGACCCTG 43366 33 87.9 33 .........T...T..G..T............. TCATTGGAATCAGACAAGAATAAAAATCATTTC 43300 33 93.9 33 .............T..................C GAGTACATCATCTTTAGCAGTGACTGCTTTAAG 43234 33 100.0 35 ................................. GAGTGGGAAAATTTACAGAGTGGTAAGCGTGAGTC 43166 33 97.0 33 ................................G GTTGATTTATATGAATTTTTAGTACAGAATCAT 43100 33 84.8 33 ......C.....A...G..............CG GGTAGTATAATTGTAGCAAGAAAACGAATGAAT 43034 33 90.9 34 ...........T.T..................T GAAAAAGAGCAAAAACTAAACCTCATTAATAGAA 42967 33 93.9 32 .........T...........A........... CTTTTATCGCCCCTTAAGCCCTATGACCTTAA 42902 33 97.0 0 ...............................A. | ========== ====== ====== ====== ================================= =================================== ================== 10 33 93.9 33 GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Left flank : AAAAGAAAAACTTGACCCGAATTGCAGAAGAGATGGGAGTCAGCAGCAACTACATAGGCCAACGGAGAAGATACAGTCTGCGGAAACTTTATCAATATAAATGCTGTGCCTGCCTGCTGCCAGAATACAAAAAACTTCGGAAAGATGTCCGAGAATATGGACAGATGCAGGAAATACAAAAAGAAGCTTACGCAAGGGAGGGGTAGAAACATTGTCCGAACTCGCTGGCTACAGCAAAAAGGAAGTGCTTTCTGTCTGACTTTTTAAAAAATATTCTACAGAAAAATCAACCAATCTCAAATTCTGACATACTATATATGAGAAAGTTGGTGAGAATCGGAAGTAACGTAAAAATCCCAGGAGATTCGCACTACAAAAATAAAAATATTGTTCTTACTCTTCTAAAAAAAATAGAAATGCGAAAGATGACAATGCCTAATTTTTGTATAAACTTTCTAAATAAAGCAGCGAAATTGTTACCAATTTTATATGATTTCACT # Right flank : TTCCTAATCTGTCATACTATAAGGGAAGGGATAATATCCCTTTGTTTGCGAGGCAGGCAACGGTCCAGTCTGTCCCGTATACTACCAATTAAACAAATCTTTTGCAGAGCAGGAAAGGAGTTTGCTATGATACGTTTTAAACAGGTCGTATCCGGTGTACTGACAGGCTTTTTATTCTGTGGTTCTGCCATCAGTGGAGCACCACTTATTGCAGCAGCTAAAACAGAAACCACATACAGCCTGACACTCGATAAGACAGAAAACGGTTCCGTTGCTATCTTTGATGCAGAAAAAGAGGCAAAGAAAGATGAGAGCAAGGAGCAGCAGAACACAGAAGCTACTACAAAAGAGAAAGCTTTAACCAAAAAGGTAAAGGCTGGTGATACCGTAGCCATCCAGGTAAAGCCGGATGCTAAGTATATCATCAAAAAGCTGTCCCTTATTGATCCTGAAACAAAAAAGAAGCTGGATGTTGAACTTTTTGCTGATGAAAAGCATGA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 5029-5385 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRNJ01000111.1 Anaerobutyricum hallii strain AF45-14BH AF45-14BH.Scaf111, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 5029 33 93.9 34 ...........T....................A GACCAGTCCCTAAAACCATTGCTTTCTAATTGCA 5096 33 87.9 26 .........TC..T..................A TGTAGGCTAGTACGCTCAGCGCGAAC 5155 33 84.8 32 .........T...T..G..............CG ATGTTGCGATTAAACACCCGGATATCTGCGAT 5220 33 100.0 32 ................................. CCTATCGTTACATTGTTTCCAGAGGTATCAAT 5285 33 87.9 35 ......C.....A...G...............G CAAGAAAGGAACGTACATAATGAGAAATGAAGACG 5353 33 66.7 0 .........TC.T............GATGGCGG | ========== ====== ====== ====== ================================= =================================== ================== 6 33 86.9 32 GTCGCATCCCTCGCGGATGCGTGGATTAAAATT # Left flank : GGGTGTGTGGATTAAAATCGTTGAACTCATTTCAGAAAAAATAATTTCTTCTTTGGGTCGCATCCCTCGCGGATTCGTGGATTAAAATGGCAGTAATCATTAGGTTTCTGTCTACCGCACCTTGTATTGGTGCATAGATTAAAATGTATCCGATGTACAAGAAGTTTATGATGTTATATTGTTGCTTCCCCATAGGTGCATACTCAAAAAAAAATAGCGTGTGAAGAAATATCGTTCACACGTATTAAGTAACAAGTAAGAATGTGAAAAAGTTCTACAGAAAAATCGAATAACTTCGAATTCTGACATACTATATATGAGAAAGTTGGTGCGAATCGGAAGCAACGTAAAAAATCCCGGGAGATTTGCACTGCGAAGATAAAGGATATTGTTCTTACTTTTCTAAAAAAATAGAAATGGTAAAGATTGCAATACCTAATTTTTGCATAAACTTTCTAAATAAAACAGTAAAATCGCTATCAATTTTATGCGATTTCGCT # Right flank : GATCAAATTGCTTGTGCAGCCGCATCCCTTGTAGATGTGTGGAGCTGCTATACTACCGAAAATCTTACCGAAGTGTAGCAGGTTCCTAATAACACAGCAATACAGGAATGCATGGATTAAAGCGAACGCTATGCCAATAAGAATTTAAAGTATCGTATCCTTTGACTCTGAGGGTGCGTGGATTAAAAAGAGGTACTAAAAAATGCGGGCAGACAACATCTTGTCCTACGATAGTCCGTGGATTAAAATGGTAGGCCAGTTTTGATGCTTGTGGATGAAGATAGTCGCATCCTATATGGTGTGTGGATTAAAATGATTATATCCAAATCATGAATGACTGCGAATTGCCAGGTCGCATGCTGTATGGATGCGCGGATTAAAATCGTAGACATGCAGTACCCCTTTTTCTATGTCGCATCCCTTGTGGTGTGTGGATTAAAGCAAGTTATCGAAAAAACACCTGAAAAAATGTCGCACTAAACAACATTAAAACACACCAT # Questionable array : NO Score: 3.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:-1.5, 6:0.25, 7:-0.04, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 17231-17461 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRNJ01000061.1 Anaerobutyricum hallii strain AF45-14BH AF45-14BH.Scaf61, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 17231 33 100.0 32 ................................. ATTGATTATTATAATTTATTATAACATACTGA 17296 33 90.9 32 .........T.T....................G TATTGCTCTGATTTGCCATGTGTGTAATTAAA 17361 33 84.8 35 ......C.....A...G..............CC TTTCGGAGGGCCGGGCACTGTAAAAACTGACTTCT 17429 33 93.9 0 .............T..................G | ========== ====== ====== ====== ================================= =================================== ================== 4 33 92.4 33 GTCGCATCCCTCGCGGATGCGTGGATTAAAATT # Left flank : CTCCTCATCTGATTCTTCATAATGTAATAATTCATATACCCACTTTGGTACACCCTTTTCCTCAATATAATTTGCTACTGGATATAAGATAAAGAACAAATATCCAATGATTAAGAATGGGCATGCAATTGGGTGGAGCGGACTTGTAATTACTGCCATAAATCCACATACTGTTCCTAAAATAATACTTGCTGCATAACTTTTTTTCATAACTTTTTCCTCCTATCATCAAAACAATACTTTCAAAAGTAGTATGTGATTTTGAATAAAGAAACAAAAAAAAGTTCTACAGAAAAATCGAGTGAATTCCGATTCTGACATACTATATATGAGAAAGTTAGTGCGAATGTAAAAATCCTGGGAGATTCGCACTACAAAAACAAAAAATATTGTTCTTGCTTTTCTAAAAAATAAAAATGCGAAAGATGACAATGCCTAATTTTTGTATAAACTTTCTAAATAAAGCAGAGAAATCACTACCAATTTTATACGATTTCGCT # Right flank : GGGTTATATAATAGAAGTCGAACGTACTTTCTGTCGCATCCTTCATGGATGTGTGGTAACTTGTCGAGGTATCAAGATTGTCATATAGGAGGTCTTAAAGTGTGATTATTAAGAAAAATAATTTTCGGAAAATATTAGTTGCTTTTTGCATTGGAACTTTTCTATGCACTGGATGTCATAATAAACAAAATATAACACAACTAGAGTCTTATGATGGGAAAGAACAAGTTTCCGAAGCAAAAGAAGAAAGCAGGAGAGAATATAAATATCTTGCAAAAACAACAGTAAAAAATGGAGATGCAGAGGTTCGTTTATTTATACCATCAGAATCAGAAAGGGTGGCAGCCTCACAATCTAAAGCTACATTACACGGGGTTACAATTAATAATGAACTCCTGAAAACTGCAGAATCTCCCAAACAGATTTCAAAAAAAGGGCTAAAAGAGGAAAAGGATATACTTGCTTCCAAAAAGAAAATCCAGAATATTGTATCTGATAAA # Questionable array : NO Score: 3.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGATGCGTGGATTAAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 6618-6065 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRNJ01000014.1 Anaerobutyricum hallii strain AF45-14BH AF45-14BH.Scaf14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 6617 30 100.0 35 .............................. TAGTCTACATTAAACTCTCTGCAGATAGCTTTTGT 6552 30 100.0 36 .............................. CCGAATCAACCGAAAATGATACGACAACTAGCGTAG 6486 30 96.7 35 .................G............ AATAAAACATAACTAGATTTTACAAAAGACTTGGC 6421 30 100.0 36 .............................. ATTTGTGCAGATAATGCAAGTAAAAAATCTAATGGT 6355 30 100.0 37 .............................. TTCTGTGAGTGTGATTTGTTTATATTCCATAGTTCCT 6288 30 90.0 35 ...T.......G.T................ TCCTTTTGCAAAGTAGGCAACATCGGCTGTTGAGA 6223 30 86.7 35 ...T......GG......C........... CTAAATGAAATGTAGGTAGCGAGATGAATTGTATA 6158 29 86.7 34 ...T..-...GG.................. TCAGTTCCAGCCGCTCCATGTCTTCATCCTGCGG 6095 30 83.3 0 ...T.......G...........A....GA | A [6068] ========== ====== ====== ====== ============================== ===================================== ================== 9 30 93.7 36 ATTAAAATAGAAACATATTGGAATGTAAAT # Left flank : AAGGAAGATGCGCTGAAGAATTTGAAACAAGAGGATTAATTGCTCTCTAGATTTTAAAAAAACAGACGGAAATAAAAAAATAGATATATAGTATCTGTTCCATATCACTGCACGAATAATGCTTACCCGCATTATTCGCTTGCTCCAAAGTCACAGATACTATATATCTATTTTTTTATTTCCTGTCTTTGATAAATTGGAGAGGTTATTCAAATTTTAGGTTACTACTTATACTTTTAAACGCCTGTCCTTGGCTACTTCTCTCCTTCTATGCTTAACAAGAAATCTATTACTCCGTTCCTACTATTTTTAAACTGTCGCCCTCCGATAATGTAAAAATGCCCGTACATCGACAGAATTCTACAAACATGAAAAATAGGTGATTTTGTTTCTCTTTCGTAGAATTAATGAAGGAGATATGGTAAAATATTTGTAAACTTTGGCTGGTCAACAGAAAGTGGGGAAATAAGGTAGAAAAGAAGCGGGAATTCGGGCAATGG # Right flank : GCAAACAATTTAATATCAAATCATCATATTATCGCTTTAAATTCATAAAACAATTTACTTTATCACGAAATCAGCATAATTCGTCAGAAAAGCAACAAAAATAGGAAAATATGTGATAATATAATCGAAATGCTATTTATTTGTTTAAAGACTAACTTAGAAACAAAGTTTTTTATAAATAATGCGATAGCGTGAGAAGCAAAGAGGTAATGTGATAATTTGGAGGTGTTTTGATGATTCGTCAGACAGGTTTAGCACAGGCAATTGACATAGCAGAGAATCGTGCAAAGTACGATGAATGTGCAAAGAAATTACTGAGCTATAAGGCAATCATAGCGTGGATTTAAAATCCTGTACAAAAGAATTTTCACAATACGGAGTGCAGTATATCTGTGATAACTGCTTAAAAGAAGAAGCCGAGGTATCAACCTATGCAGTACATCAGGATGAATTAGATAAGAATGACAAACTGGATGGAGACAAAAGAGTGGAAGGCATGA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAATAGAAACATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //