Array 1 186092-185328 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMDD010000003.1 Pediococcus pentosaceus strain U1911728 NODE_3_length_374008_cov_19.897473, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 186091 36 100.0 30 .................................... ATTAACTCGTAAGAAGCGGATAGTATTGCT 186025 36 100.0 30 .................................... CAATATCGTCAAAGATTTATTAAATGAAGC 185959 36 100.0 30 .................................... CCTGTGTCTTATTAATAATGAGTGACAACT 185893 36 100.0 30 .................................... CTGCTACACTCAATACTTACAAAATCAACG 185827 36 100.0 30 .................................... TACGTTTGATATATCCTAACTCTGCAGCTT 185761 36 100.0 30 .................................... TTCAATTGTCACTGCAGCAACAGGAGTGTG 185695 36 100.0 30 .................................... GACTTTATTAAGAAAGTACAAAGTCGTCAG 185629 36 100.0 30 .................................... AAAAGAACAACTGAGTAGCCTCCCAGGGCT 185563 36 100.0 30 .................................... TAAATTTCGCCATTAAGCTTCCTCCAGTTC 185497 36 94.4 30 ...........A...............C........ TTCTGCCGGCGGAATCCACTAAATTTGTTT 185431 36 97.2 30 ...........A........................ TGCGACCATCGCTATACATAAGCATATTTG 185365 36 88.9 0 ......................G.....AA..T... | CC [185337] ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.4 30 GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAGTATTTGCGCCAAATTGAAAAGTTATTTTTACAGTCTGTTACAGATGAACAACAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCTGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACGATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGTGTTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAATTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAACTTCTATAGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAACG # Right flank : AAACTGTACCCCGCAACAGCTTAGCCAGCTGTTACAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAATTAAAAAGAATCATTTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGACCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATGTGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATTGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATTGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACTAAAGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //