Array 1 18513-19803 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNKU01000028.1 Sharpea azabuensis DSM 18934 T529DRAFT_scaffold00026.26_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 18513 36 100.0 30 .................................... TTTTTTCCTCTTTTAATTAATAAATTCTAA 18579 36 100.0 30 .................................... ATGTCCATGTGATCCATCGCTTTCAAGACT 18645 36 100.0 30 .................................... TATTCTAATTGCGATATTTTGTGTTTTTGC 18711 36 100.0 30 .................................... AGGTGGAAATGTTGCGGGTGCGGTTGGATT 18777 36 100.0 30 .................................... TATTGACACATTAGCAAATGAAGTTATCAA 18843 36 100.0 30 .................................... ATGGCAGCGTCAAGAGAAGATGACTCAAGA 18909 36 100.0 30 .................................... AATCGATTCTTGCAAAAGAATACGGTCTAA 18975 36 100.0 30 .................................... ATCAACGAAACAGCACTCAATTAAAAGTGC 19041 36 100.0 30 .................................... AGATGTAATTTTTTATGACTGGCAAGACAA 19107 36 100.0 30 .................................... TATCAGAGGTGTCGTGGTTCATGAAAGAGC 19173 36 100.0 30 .................................... TCAACACGCTGAATAGGAAGCTGATGGAAA 19239 36 100.0 30 .................................... GCAGACATTTCTTGCAGAACCACCAACTGA 19305 36 97.2 30 .......................G............ TATGCCTACATTGGGAGAGATTGTTGACTA 19371 36 100.0 30 .................................... TGACTTCTAACAAATGAAGTAGTATTGTAT 19437 36 100.0 31 .................................... CATTGGACATAGCAACCGTTCTTATTCCATT 19504 36 100.0 30 .................................... AGAGCGGAATATACAAAAGCGAAAGGCAGA 19570 36 100.0 30 .................................... ATCTATTACTAACAATGACGCAAGCTTATA 19636 36 97.2 30 ........................T........... GAGGTAACACCTGACGAAACTCGTATTTAC 19702 36 100.0 30 .................................... TCCATAAGTTCCATTGATGACAATCTTCAA 19768 36 97.2 0 ..................................C. | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 99.6 30 GTTTTAGAGTTGTGTTATTTTGGACTGAACTAAAAC # Left flank : CTATCTATACAGACATACAGTCAAAGATTATTGATGATGGAGATTTAGATATTGAATTCAAAGAACATATCCAATTTCTTAATCAAATCATAGAAAATAGTTTAGAAGACTATAATCTTGATTTCGACTATGATCAAGAACTTCTTGTTGAGAACTATCTGAAAGCTATTGGATTAAAGGTTGTAAAGGATATGGATGAACCATTATATAATACATTCATAAATTATCTTGAATTAATCTCTGAATTACTTCCTGATTCAGTATTAATCATAGCTAATTGTCTAGAATACTTTGAACATGATCAAATAGTAGAAATCTGTAAATATAAAAATTACAAGCATCTAAATCTCTTATTCATCGAATCTTATTTAAGTAACTTTGATGAAGCAACTAAATATATTATTGATGAAGATCTGTTTCAAGTGATAGAATAAATACGAATCAGTTCATGATAACTAGCTTGTCGTTGGGCGAAAAAACTCTAAATACATCAATTTGAG # Right flank : CGTAACCTTACTATTATGTCTTATATAATGTTTTATAAAGTGTAATTATAATTGTAAGTATAATGATGATGGGAATGAAGAAAGTGACTCTTCATTCTCTTTCTTATGTTATACTTAGAATGGCTTTTTGGAGGGAAATGTAATGGATGAAATACAAGCATTAGTAAATAAATTTGTGAGTTATAGAGACTGGGATCAGTATCACCAGCCAGAGAAGCTTGCTATGTCTATATCTATAGAAGCAGCTGAACTGCTAGAACATTATCAATGGGGATATGATGGTGATGAACAGGGTGTTAAGGAAGAACTAGCTGATGTTCTTATTTATTGTTTTCAGATGTGTGACAAGATTGGTGTAAGAGCTGATGATATTATTAAGATGAAAATGAAGAAGAATGAAGAGAAGTATCCAGTAGAGAAAGCTAGAGGAGTAGCTACTAAGTACGATAAGTTATGATTATTTATAAAGAGAGTAAGAAACAGTTTGTTGCAGATGTTTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTTGTGTTATTTTGGACTGAACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 6812-6577 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL370869.1 Sharpea azabuensis DSM 18934 T529DRAFT_scaffold00077.77, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6811 36 100.0 30 .................................... TTGGAAAGTATCGTATAATCGTTATTTAGT 6745 36 100.0 30 .................................... ATGTCCGCGACGGTCCTCTTGACACTCTTG 6679 36 100.0 30 .................................... CTTCAGAAGAGTGAAGGCTCCTGTCGAAGA 6613 36 91.7 0 .............................T.G...T | A [6579] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 97.9 30 GTTTTAGTCGTCTGTTATTTATTGGTAAGGTTATAC # Left flank : | # Right flank : TTCATAGTTTGTTCTTTTTTTATGATTGAAGGTGATTCTTATTCTAATTAAGTACATTGAGGTATTTGGTGTTTGTTGTTTCGATTCTGTTTATAGAGTCGAACTTACACAAAATAATTATTTATATGGTAAGACCAATTCAGGTAAGTCTTCCTTTTTGAAATGTCTTTGTTTTTTCTTTGATGAGTTAGGTGATTATTCAACACTTACAAACGATGATATTTTATCTGATAGTTCTTATATTGAAATAGGAATTGAATTTGACAAAATAAAAACAATTCGAAAGACCTTTAATAAAATTCATTCTATCAAGTATAAGACAGATTATAACAATCTAACAGCAAATGAATTACTAGAATTTCAAAAAATAAACATCAAATACTTTACAAACGAAAGAACATTTACAGATAAAGAAATAGAATTACAAAATCTTAAATTACATCTAATAAACTATATTAAAGATCTTAATTTAGATCAAATTAATGAGTTTGAAGAAAAAT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCGTCTGTTATTTATTGGTAAGGTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //