Array 1 264420-267464 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYDE01000003.1 Marasmitruncus massiliensis strain Marseille-P3646, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 264420 33 100.0 33 ................................. GTTTTGCCACTGACTGCGCCACATCATCAACAC 264486 33 100.0 34 ................................. GAACGATGAGAGCACCATGCTTGCCAAACTGATA 264553 33 100.0 35 ................................. TCCGGTTAGGGGCGTCAGAGGGCGCAAGGTTAAAC 264621 33 100.0 34 ................................. ATCGCACCTATCAGGATTGGGAGTGTGGAAAACG 264688 33 100.0 34 ................................. TAGTGGGGATATTGTCAGGCGCAGCGGATATTAC 264755 33 100.0 34 ................................. CGCTGTTATATCCGCCTATGCCGTAGGCGACCAC 264822 33 100.0 34 ................................. TTTCAGGGTGGCGTTTTCGGCTTGCATTGCGCTG 264889 33 100.0 35 ................................. TGACGACGCCTTGAAAAACTCTATTTGTTTTGGGT 264957 33 100.0 34 ................................. AATTTAGTGAATGTCAATAAGGGTAATATGTTTA 265024 33 100.0 34 ................................. TGTTTAAATCTGATTTAATTTCAAGAAATTCTTC 265091 33 100.0 33 ................................. TTCCATAATTCAAACCAAGTCATTTTTATCCTT 265157 33 100.0 34 ................................. CGCTTGAAACCCAAGCCCCGCAGGAGTCAGACCC 265224 33 100.0 33 ................................. GCTGGTACTGTTGCGCCCGCGCTGACGTGTTTT 265290 33 100.0 34 ................................. TACTCTAGCCACACTGGAAAGTATAGGCTATACC 265357 33 100.0 34 ................................. TGTACTGTACGACGGCAAGATTGTCCGTCCGAAA 265424 33 100.0 33 ................................. GTGTCAGATATGTTTGACAATCGGAAAATTAAG 265490 33 100.0 34 ................................. CTTAAAATATATTTCTTATCTCTTCTTTTGTGTG 265557 33 100.0 34 ................................. CGTTTGCAAGCCTGTATACATACAGCAATAGCGA 265624 33 100.0 34 ................................. CGTTTGCAAGCCTGTATACATACAGCAATAGCGA 265691 33 100.0 34 ................................. GTTCTAAGATTTTCGAGTATGCGCTTTGCAATCA 265758 33 100.0 35 ................................. GATTATATCAAAGACAATGAAGCCTGTGCAAAGTA 265826 33 100.0 34 ................................. TCGTATTCCGTGAAGGTTTTCAGCGACAAGCCAG 265893 33 100.0 34 ................................. TTAATATCCGGTATCTGGCGCGGCTTTCGTTTAC 265960 33 100.0 35 ................................. ATGAATTCTTGACAGAAAACAGTAAAGGATTTAAT 266028 33 100.0 34 ................................. CTTTGTTGCTGCTAAAGGCTCCGGGGACGTTTTC 266095 33 100.0 34 ................................. TTTTGGGTATTTGTACGTTTATGTTTGGCATGTT 266162 33 100.0 33 ................................. AGTCAAGCCATCGGGTAAGAGGAGGTGTATCAA 266228 33 100.0 34 ................................. AATGATGCGCTTTCGGAATCGATCAGAACTAACC 266295 33 100.0 34 ................................. CTGTATCTCAACTTCGATTTCCCTGTTTTCGGTA 266362 33 100.0 34 ................................. ATTGGACATGGATAAAATCAGCAGAATGTTACAC 266429 33 100.0 34 ................................. ATCTTAAGAACACCGAACCGGTTCGAAAATTTAA 266496 33 100.0 35 ................................. GTTTCCGACAGCAAAACAGCAACCGGCTCCCGGAC 266564 33 100.0 34 ................................. TATCTTTAGCAATGTCAAATAAAAAGGACGTACT 266631 33 100.0 33 ................................. GTCCGTTCCGGCCAACATCAATGATTTCATCGG 266697 33 100.0 35 ................................. ATTAAGGGGCTTATGCCAATCGTCAAAGAATTGGC 266765 33 100.0 33 ................................. CACAGGCTGTTTGGGCAGCTAAAAAGTACAGGT 266831 33 100.0 33 ................................. TGATCGGCTTGTCGGTTCCCGCCCACTGGTTTA 266897 33 100.0 32 ................................. AAATTTGTGAATATCAATTAAGTCCTGTTGTG 266962 33 100.0 34 ................................. TTCTTCCAATTATACAGGCTATTACTCCTGAGAT 267029 33 100.0 35 ................................. CGCGCGGACGCAAACACGCTGACTTCCGATGTGGG 267097 33 100.0 36 ................................. TTCTGAACAAGTAAGACTGCGATGAAAGTTTTCATA 267166 33 100.0 34 ................................. AGTCCGATTCCGCTGCATATCCAGCTTACACCAA 267233 33 100.0 33 ................................. CCTAAAACGTCTGCAGTCGGCGCCTGCGGGCGT 267299 33 100.0 34 ................................. TTCAAGCCCGCGCTGCGTGAGCTGAGCATAATAT 267366 33 100.0 33 ................................. GTATCCGGCATTGTTTCCAACGCCAGCTTGGAG 267432 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 46 33 100.0 34 GTCGCACCTCGCATGAGGTGCGTGGATTGAAAT # Left flank : GTTGGCGAAATATATCAGGAGTGAAATAGAAGCCTATCCTAACCTGATTTGGGGGTAGAATATGTTTGTAATTGTAGCCTACGACGTAAATGTTACTTCTGAAAAAGGCAGGACCCGGCTTCGCAAGGTTGCAAAGGAATGTGTCAATTATGGCCAGCGGGTGCAGAATTCGGTGTTTGAGGTTAATTTGGATTACGGCAAATTTCTAAAGATGAAAGATCGTCTCATCAAATTAATTGACACCGACAAGGATAGTCTTCGCTTTTATTACTTGGGAGACAACTGGAAAAGGCGCGTAGAGCATATCGGTGCAAAACCGGGATATGACAGTGAGGGAGTGTTGATTTTTTGAATGCGAACGTGCGGTGACAGCGAAAATGCTGTCTGGTTCGCGCGGCTAATCTGGCTTGTAAACAGAAAAAGTATCTTATTATTGTTTCCTTTTTGCTTTATTGTCCACTTCATATACAGGGTGCGGTGTTATATACACAATATATAGG # Right flank : TAAGACCTAACGCCTCGCTGCGCCGAAGCCCAGTGGTCGTACCTCGCATTGGCGGTATGTCTCGCAGCCACCATGGCATTTTCAACGGTCGGCTGTGATTCCGCAAATGCGGAAAGCTCTTCGGAAAGCGGTTCTGCAAGCTTGGCAGATTCGAGTTCCGGCGACGGAGAACCTGTAACACTCAAAATCACTTGGTGGGGTTCACAGAGTAGACACGACTATACTCAGAAGCTTCTAGACCTTTATACAGAAACACATCCCAATATAAAGTTTGAAGCGTCGCCTGCCGGTTGGGATGGATATTTTGACAAACTGTCAACGCAGACGGCTTCGGGCTCTATGCCGGACATTGTACAGATGGACTATTTGTACATTACAACTTACGCACAAAATAATTCTATCGCGGATTTAAAGCCGTTTATCAACGATGGAACGCTCGATGTTTCAAGCGTTGGCGCGAACATTTTGAATACCGGTGAAATCAACGGAAAAATGGCTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCGCATGAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCACACGAGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.90,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 157066-159902 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYDE01000004.1 Marasmitruncus massiliensis strain Marseille-P3646, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 157066 32 100.0 34 ................................ AAATAGCTACATCCCATCTACAAACGCAATTGCG 157132 32 100.0 36 ................................ CCGGGTGATTGGTTGCAAACATCCCTACACTGTCGC 157200 32 100.0 35 ................................ ACAAACGAAAATAAAAACCAATTGCTTCGTGACCT 157267 32 100.0 35 ................................ CGAAGCCCCGCCAGATTGCCCCATAGCCGCCAACT 157334 32 100.0 36 ................................ CCAAAGGCGGGACAACTCCATTTACACCAATCGGAG 157402 32 100.0 36 ................................ CTAGAGCAAGACGAAGCTGGAAACTGGTATTACGAC 157470 32 100.0 33 ................................ TAAGAATGTCTTGTGGGGTTAAATTTGCATCGG 157535 32 100.0 35 ................................ CGCTTATTGTTAAAACAGCACAATTTCCATCTCCG 157602 32 100.0 36 ................................ TTTGATTCCGTCAGAAGTGCGGCCGTATTTTTTAAG 157670 32 100.0 36 ................................ CTGAATTTCGTCAGCCGGTGCGGGTTCTCCTTCGCC 157738 32 100.0 34 ................................ CATCCGGTGAAGCTCCGGAAATCGGAATCAGTGA 157804 32 100.0 34 ................................ TAATATAACTAAAAATATGTGCAATCACATCAAC 157870 32 100.0 35 ................................ TCGTCCTTTGTACGTATGCGCTAATCGCCAGTGAT 157937 32 100.0 34 ................................ CCTGCCGGAGCAATACCAGCCCCGGCCTGTAATG 158003 32 100.0 34 ................................ TGATGAAGAAGAGTCCGGTTCAGAGGACGAAGAA 158069 32 100.0 33 ................................ ATGAATAACACTCCTTTAAAAAATATATTTATA 158134 32 100.0 39 ................................ CATTATGACAAAGCTGATTATATCATGAAAGACTGGCGG 158205 32 100.0 36 ................................ TTGGACGCGATTGTCAGCGCGAGCGGCCGCGGCCGG 158273 32 100.0 33 ................................ TTTCCTCCTCTTGCCCAACGGCTCAACCTTAGT 158338 32 100.0 33 ................................ TGGAAGTCGGCGGGAATGCTGTTAATATTAAGG 158403 32 100.0 34 ................................ AGCGAGAAATGTGTTACAGCGGGGCGGCGTGAGC 158469 32 100.0 35 ................................ CAAGGATTCCTTTCATGTATGAGAAAAGATTCTCC 158536 32 100.0 36 ................................ TGGGATAAGGGGTTTTAACATCAGTTAAAAGCATAA 158604 32 100.0 34 ................................ TGTAATAGTAAATTTTGCTGTGCGCTGGATAGTT 158670 32 100.0 36 ................................ CCTTAAAGAATGGGTAAAAATCATGACCGCAGTTAG 158738 32 100.0 35 ................................ AGCACATGCGTTTGTTGCGTCAGCGATTACGCGGG 158805 32 100.0 34 ................................ CAGAATGTATGAGGGTTTTAAAACCATATGGAAC 158871 32 100.0 34 ................................ GAAGAGGAAGAGCAGAAAGAGAGTGATAGCCATG 158937 32 100.0 35 ................................ CGTCTAATGGCTATTTTAACGATTGGTTTAATGAG 159004 32 100.0 35 ................................ TGGTTTATTGGTAAATGTAACACAATGCAGAAGCT 159071 32 100.0 35 ................................ CATTAAGGCATGGCTACAGATGCATGATAACGATT 159138 32 100.0 35 ................................ GAGGTATGTTTGGTTAATGATCTCTAAGAAACCAT 159205 32 100.0 35 ................................ CTGAACCTCCAAACGGAAAATGGAATACGTCCGGT 159272 32 100.0 33 ................................ CGGTATCAGTGTGTACATGTCAAATATCATTTC 159337 32 100.0 34 ................................ ACATTATCAGTGGATATGAGATGGCTGAAAAATT 159403 32 100.0 35 ................................ TAAATTGGTTGGCAAGCCAATAGATGTGTGTTTAA 159470 32 100.0 37 ................................ AGAGACTTGTCACCACACGCCAAGCGCGGCGTACAAA 159539 32 100.0 33 ................................ AGCGAACTGTATGACGAATTTTTACCATTACAT 159604 32 100.0 35 ................................ CGAACTGGCACAAAAAGAAATTCATATTGATTCTT 159671 32 100.0 34 ................................ TAAGAGGGATTTATAAAACTGGATGCTTGCGTGA 159737 32 100.0 36 ................................ AGGACAAAGCTTTTGAATTATACAAGATACACCATA 159805 32 100.0 34 ................................ AGGTTGACTTCTTCCGTACGAATCCTGATACCAT 159871 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 43 32 100.0 35 GTCGCTCCCCGCGCGGGAGCGTGGATTGAAAT # Left flank : GACTTGGAAGAATATCCACCATTCCTGTGGAAGTAGGAGATTGTAATGCTGGTGTTAATTACCTATGATGTCAATACAGAGGATGCAGAAGGAAGAAGGCGTTTGCGCCTGATTGCCAAACAGTGCGTCAATTATGGCCAGCGGGTACAAAACAGCGTTTTCGAGTGCCTTCTGAACGCGGCGCAGGCAAAAATGCTCAAGCACAAACTATGTGGCATTATGGATGAAAAGAAAGACAGCTTGCGGTTTTATTATCTGGGGAAAAATTATCAAACAAAGATTGAGCATTTCGGAACAAAAGTCAGCTATGAGCCCGAAGGTGTACTGATGATTTAGGTTGGTGCGAAGTATAAGCACACATTTCTTTTAAAAGGCTTCGCACTGTATTTATGAGTGCTAACCATTTAAGTCCTTATCGTGGTTTTGATTTTTCACTGTAAAAATATTGCAAACTTGTGCAGATAGCTGATCTTTTTAGTGAAAATCTGTGGGTGTTTGCT # Right flank : TTGTCCGAAATCTCACCGGCGCACTCTGCATACCCAGTCGCTCCCTGCAATGCATCAATACGAATACACATTTTGAATTCAGGCAATGTGGCACACACTTCATAAAAGACGGGAAGAACTATACACTTCCTGTAAGGCAGCTTTGCAGTCAGGCAAGAAAAGCAGGAATTGACTGTTAGAGAGAAGAGCAAGTAAAATCAAGCCGTACTCTGTTTATTCCTTTATAATGAACGCAGGGCAGTTGAAACGAGGTGAACCGATAAATGTACGAGTGGCACAAGCAGATTCAAATAATCGTGGATGAAATAGACGAATGTATCAGACATCATCACAATGAAGCTCTGACACTACGGTTTCTTTCCCGCAAGTTGAGTTATTCGGAATTTTATACTACCAGAAAATTCAAGGATATATCGGGTATGCAGTTTCGGGATTATCTGCGGCATAGAAAATTGGCTTTTGCGCTCAAAGAAGTGCGAGACAGTGAAAAAAGCCTTTTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //