Array 1 51580-49892 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNBB01000003.1 Limosilactobacillus fermentum strain LfU21 NODE_3_length_68933_cov_111.521001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 51579 36 100.0 32 .................................... AATTGCGAGTTCTTTCTCGCCCTTTACCTCCG 51511 36 100.0 30 .................................... GAGACAAACTGAAGAGTAAGCTTGATGATG 51445 36 100.0 30 .................................... GCATAGTCACTCTGACTAACAGTAAGACTT 51379 36 100.0 30 .................................... AATTTGCCGCTTCCTCAAACCAGACGGCAA 51313 36 100.0 30 .................................... ATCTTTACGGCTTCGAGATCACCGTCTTCC 51247 36 100.0 30 .................................... AAGTGGCGATGGCTGACATGGTAACGATTG 51181 36 100.0 30 .................................... AATGCTGCAATGGCTAAACGGCTTAATTGC 51115 36 100.0 30 .................................... ATGAAGCTGAGAAGGTCAAGGCTGAGACTG 51049 36 100.0 30 .................................... CGGATTCGGTTAGTTTCTGCTGTAGTTGTT 50983 36 100.0 30 .................................... TCAACGTGAATCATCATTTCTTGGTCAAGT 50917 36 100.0 30 .................................... ATCGACAACGTGATTGGGGACCCAATTGTC 50851 36 100.0 30 .................................... CATTACCTTTACCTTTCTTGTTGTATACCG 50785 36 100.0 30 .................................... ATCTTTAAATAACGGTCATCGCCCATATCA 50719 36 100.0 30 .................................... CAGTTTTACAATGACTACGGGATCCATTGG 50653 36 100.0 30 .................................... TCCCAGATTGATGAACCGAAAATCTTGTTA 50587 36 100.0 30 .................................... GCCCGGCCACTGTTTCATAGTACATAGCCA 50521 36 100.0 30 .................................... TCCGGCGCGTCAAAAACCGCTAAGCCCCCC 50455 36 100.0 30 .................................... TTGCATAGAAAGGAAGCATATTAAATGGCA 50389 36 100.0 30 .................................... GGGACACTAGTCATTTGCACGTGGGAGTTA 50323 36 100.0 30 .................................... CGCCGCTACCATGATGGGGATCAATATATC 50257 36 100.0 30 .................................... AATTGACATCCGGCTTTTTGAGGCCAGACA 50191 36 97.2 30 ...............................G.... AGGCAAAGCCGTCAGAGTGACGACAAATCT 50125 36 100.0 30 .................................... CTATCAAAGCTGAACAGTTCGATGGTTCTC 50059 36 100.0 30 .................................... TCGTCAGTGCCACGCATGACCACTTCATAG 49993 36 100.0 30 .................................... TTGAGCTTAGCAATTGACGCGGTAAGCTGT 49927 36 86.1 0 ............................TA..A.TA | ========== ====== ====== ====== ==================================== ================================ ================== 26 36 99.4 30 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Left flank : TAATCCAACCAAACTTGATAGTTACCAAACGTCACTCGATAAGATGATTGTCAAAAATCTTAGTATCGAGAAGCGAGATCGGATGAATAACCTTGCTCGAGAGGTGTTCTCAGAGATGCAAGATTCTTTGTTCGAATTCGACTTACCGTTGGAGGCGCGGTATGACGAGAGCCTCTTGAGATTATACAAATATGCGAAAATTAAATATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAAGACTGTCAGGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTGCCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTGGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGACCGTTAGTTTTTGATGAGAAAACAACG # Right flank : TAGACTAAGGGCGTTGCTGTTTTTAGCAATGCCTTTTTTAGAAGTGATGAGGGAAAGGTAAATGTTTTCACGTTGGTAATCTGACGGGAACTTTAGTGGGCGATGTGCTAGGATAGGGCCAAAATGATTGGAAGTGTTTGCCATGCAAATTGATCCCGAACGGATTCGCCCCGAACTGCGCCGAATCGGCAAGGTGGGGTACGCAATCAACCTGATGGCCAGCCCGCACGCCTGCAACGAATGGGACGAATAACGGCGAAGGCGAAAATGCCCATTCACTCGCGGCGGGTGATCAAACAATACGTTTGGATTGAACGCCCTGACCATAGCAAGCTTCGGCTGGCTATTTTCCGGGCCAAGCAAGTTGCTACCAAGCGCCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTACGCCTTGGAAACCGCCGAAAATGCCTTGGTTTATGCTGAACAGTTGGTGGCTGACGGACGGTCCGTGATGGTGGCGCCGGATTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //