Array 1 183085-180323 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJLP01000003.1 Legionella pneumophila strain ST62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 183084 37 100.0 34 ..................................... CATCAACCGGGTTAGCATTAGCATAAGGCGCATC 183013 37 100.0 35 ..................................... AAGAAAATCAATAAATCCAAACAACCAACGAATGT 182941 37 100.0 36 ..................................... CTTCATTGCAGGGTACAGTTGAAAATTCCCTTACAG 182868 37 100.0 34 ..................................... TAAATGAATTTTCAATGATTTTAGCGGCTTCGAT 182797 37 100.0 33 ..................................... CCGGATAAAATCGGCAAGGCTTGTGGGTGACGA 182727 37 100.0 35 ..................................... CTTTGAAAAGGCTCATACCTTGTTACCCCTTGCAT 182655 37 100.0 33 ..................................... AGAGTGATCACTCTTGAAGATGCTCTTGGTTGG 182585 37 100.0 30 ..................................... TGATAATTTAAGAACATATAATAATTCTTT 182518 37 100.0 33 ..................................... ATGAATAAAAATGTCTCTAACATGTCAATTCTC 182448 37 100.0 35 ..................................... TACAATTAAAGTATATGAAGCATTCAAAGATTTCT 182376 37 100.0 36 ..................................... ACTTTCACTGTAACAAGAAACGCCGACGGCAGAGGC 182303 37 100.0 35 ..................................... TTATATTCTCCACGTTCATTATTTGTACAATATGA 182231 37 100.0 35 ..................................... TTCCATTCGGCGGCACGTTCGCTGGTTGGATCAAC 182159 37 100.0 35 ..................................... AATATAACACCAATGATTCCGGTATAAATCACTAA 182087 37 100.0 36 ..................................... GTCTCTCCAGAAGAACAGGCCAAGCGAAATGAAGAT 182014 37 100.0 34 ..................................... TTTAATGTTCTTTGTGCAGTCATTGATTCAGGTA 181943 37 100.0 35 ..................................... TTATCGTCTATAACTACTAGACCGTCATCAGTAAC 181871 37 100.0 34 ..................................... ATAATACGGTTTTGTAAGCCGTCTAATTCACGTG 181800 37 100.0 35 ..................................... TCTATTAACAGCCCATTAACTGATCGACAAGGACG 181728 37 100.0 33 ..................................... ATTGCAAGCGGGTTTGATCGTGTTATTATAAGA 181658 37 100.0 34 ..................................... TTTATTTAGTCGTTTAGAAACCATGCGCCTCAAT 181587 37 100.0 35 ..................................... GTACTGGCCGACCAGACTACGGTACTTCCTGATCC 181515 37 100.0 35 ..................................... AAAACTTTCATTTGTTAAATTACGCATTTCATTTA 181443 37 100.0 34 ..................................... ATAGTTAGAAGATTTACTCTAGGAGTTTATTGGC 181372 37 100.0 35 ..................................... TGTAGCGAAGGCGAGGTTCCATAATGTATAAATTT 181300 37 100.0 34 ..................................... GTGCATGGTTTGCGCTTTGCAACCCTTCCGCTGA 181229 37 100.0 35 ..................................... TTGTGGTTATGCTTGTTCCTGTACGTGCTGTTACT 181157 37 100.0 35 ..................................... TCATAACTCTATTCAAATTGCCAAAGTAAGCAATC 181085 37 100.0 37 ..................................... TCAGTACAGCAGCTTTAATCTCTGCAATCGCCTTAGA 181011 37 100.0 35 ..................................... CTCTAGCCCGTCATATTCTTCAACTACCCAATCTA 180939 37 100.0 36 ..................................... TTTTGAATGTCTGTTTCAGTGTCGAAACTTAGTAAT 180866 37 100.0 35 ..................................... GCATCTTCTGAATTAGCCACGTCTTCAAGACTGTT 180794 37 100.0 35 ..................................... TCTAACTAGTTGAGGCGCTCTAGCTTTTATTTCAG 180722 37 100.0 35 ..................................... AACAGAAAACATGCACAGAAGAAACTGGAAAGCAG 180650 37 100.0 35 ..................................... CTTCCTGAATTAAACTTATTGTGTTAACTTTTTCA 180578 37 100.0 34 ..................................... TTGCTGATGCTTCTCTAGCTGCTGATTCTTGTAT 180507 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 180434 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 180359 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 39 37 99.7 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //