Array 1 172014-168892 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVNS01000001.1 Alkalicoccus urumqiensis strain BZ-SZ-XJ18 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 172013 31 100.0 35 ............................... CTCCTTTATGCTTTGTGATCTGTCACTCCACTGGG 171947 31 100.0 34 ............................... CGTCAGACCCGATTATTAAGGAAATACAGGATAG 171882 31 100.0 35 ............................... TGTTGATAATGACATTTTGAAGCAATCGTTTCGCG 171816 31 100.0 35 ............................... TTCGTTGACGATAATTGGATCATAATTTTTGTTGG 171750 31 100.0 35 ............................... GATTGGGTTAAGGAAAGCCCGCACCTGCAGCGCAG 171684 31 100.0 35 ............................... ATATATACTGCGCTCTATTCGTCCCTATCGGCGCG 171618 31 100.0 35 ............................... GACTTGCCTACGTATAAACACTCGCCCGAATGGCG 171552 31 100.0 34 ............................... GCCATGCCTTGCCCAATACTCATAGATTCGCGCG 171487 31 100.0 34 ............................... TGCAATCGCGCTTACTTGATCTGATGCCTCATAG 171422 31 100.0 37 ............................... ACCAAAAGAGCATCATTGACGACATGACTGTTCCTGG 171354 31 100.0 35 ............................... ATCATTACCCTCTCCTTTTTTGGTTTGTCTATCTG 171288 31 100.0 35 ............................... TTCCTTGAACCCAGCCCACCTCTTTTAGCCCTCTG 171222 31 100.0 34 ............................... TACAACCCAAGTGGTATCACCAGAAGTCCGAGAG 171157 31 100.0 35 ............................... TGGCTGCCTTTGGTGTCTAAAAATTGCACGCTGTG 171091 31 100.0 38 ............................... CTTTTTAATCCCATTTTGTGTGTGAACGAGTAAATGAG 171022 31 100.0 34 ............................... TTCTTTGATGCCTTTATCCAGCGCCCCCATATTG 170957 31 100.0 35 ............................... ATTTCCCCAAACACTAAAAATTGAACTAACATACG 170891 31 100.0 34 ............................... ATTCGCCGCAGCTGGTTAAACACGCTCTGCCTGG 170826 31 100.0 34 ............................... ATGTGCATTGAAACGAAAATGTCCGCCCCTAGAG 170761 31 100.0 37 ............................... AGAATGAAGTGGCCCGAGCAAGTCGTAAGGCTCAAGG 170693 31 100.0 31 ............................... ATTAGGAGGCTGCTGATGATCGACTACAGCG 170631 31 100.0 34 ............................... TATTCTTCCGCAGCAACCAGGCGCGCCAAACTCG 170566 31 100.0 35 ............................... CGTGTTACTTTGATAACATGGAAGGCTGGCACGGG 170500 31 100.0 36 ............................... TTCGCAACGTTGTACGTACACCAGGTCGCCAACTTG 170433 31 100.0 35 ............................... AAGAGTTCTTTAATTTTGTCTGTTTCAGGAGAATG 170367 31 100.0 35 ............................... ACACTGAGAAACAATAAAGCAATTAAAATTAGTAG 170301 31 100.0 35 ............................... ATTGTCACCTGTGCTGGTTAGGTTTTCGGTGTTTG 170235 31 100.0 36 ............................... CCCCTGCGTCTCTTAGAAGAGCGTAAGGCGCTGAAG 170168 31 100.0 34 ............................... AGGAGTCGATAGAGGAGGCCATCATCGCTTACCG 170103 31 100.0 34 ............................... CCGTCAGGATTGGCGTTAAAAAACTTAGATTCCG 170038 31 100.0 35 ............................... ATAAATGAAGTCATTCCGTGTCAATGCCGGTGGCG 169972 31 100.0 34 ............................... GCACATCGGCCGGCTTGACGTTATCCAGCTCACG 169907 31 100.0 35 ............................... CGAATGGCTGAGCAGTATATCCCCTCTGTCATTAG 169841 31 100.0 35 ............................... ACATTCCGCATCCTCCCTTGCAGCAAGTGGAGGGG 169775 31 100.0 35 ............................... TAAGGGGGTGACACTTTGTCCACAATCGGAAATTG 169709 31 100.0 33 ............................... CGTCATCCGTTCCGGGCAGCAATGCGTCAAGTG 169645 31 100.0 35 ............................... GTTTAGCAGGGCCGCCGCTGACGTTGTTTTGCCGG 169579 31 100.0 36 ............................... TAATACACAGCACCTTGTAACCTCTGCCGTTAAACG 169512 31 100.0 35 ............................... ATCTGCTGATAGCCGTCGATGTCTCGCTCTTTGGG 169446 31 100.0 34 ............................... TATTCTTCCGCCGCAACCAGGTGCGCCAAACTCG 169381 31 100.0 35 ............................... ATCGCCAATATGCGCGCCCATGCTTCGTCCATTGG 169315 30 96.8 34 .....-......................... AACGTTTTATAGTAATCGTACCACTCACTCTCCG 169251 31 100.0 36 ............................... GGATCCGGCTATCAATCGCCGTGTATCGTGTTAGGG 169184 31 100.0 34 ............................... CGTTTTTGCGTTGCTTTTCGCTACTTTTCGCGAG 169119 31 100.0 34 ............................... AGTGATATAGTCACCGTCTGTTATAGAGTCAATG 169054 31 100.0 34 ............................... CATTAATGATCTGGTTGATAGTGTGGAAGTTATG 168989 31 100.0 36 ............................... GCGTGGTGTTAGCGCGGCGGCCATAATCAGCACGCG 168922 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 48 31 99.9 35 TCGCACCCCATGCGGGTGCGTGGATTGAAAT # Left flank : TCCGCCATTTTTCTGGAAGTAGGTGAAGGCATGTTAGTATTGATCACATACGATGTAGTAACCTCCGACCTTGGCGGGCAGAAAAGATTAAGAAAAGTAGCAAAGCACTGCGAAAAATATGGACAGCGCGTCCAGCACTCGGTGTTTGAATGCTATATCGATCAGGCACAGTACACGGCATTAAAGCATGAATTGACTGCACTTATCTCCGAAGAGAAAGACAGCCTGCGCTTTTACCGCCTCGGGAACAACTACAAAACAAAAGTAGAACACGTAGGAGTCACAAAAGGTCTGGATATGCAGGATCCTTTATTATTTTGATGCTGTGCGAACCCCAAGTGATCATGAAAGCTCCAAGGTATTCGCACATAGAAAAATACCGATTAATGAGTTGAAATAACTATATTCAGGCTCGGGACAATTGTTCATATTAGTTCCGAAGTGGTGAAAAGATTCTCGATTGGTTTATAAAAATAAAACCAACGACCTTCTTTTCGCCG # Right flank : AGATCAGATTCCATATGATCTAAGGTTGATTCTGCTTATTTAGGTACATTGCTCGGTACGTTTTCTAAGCAGTCGAAGAAGAAGTCGTTTAATATAAATGAAGCAGAACATAGTTTTTTTCTAATCACTGCAGAATAAATAGCAATCTTTATTCACAAAAAGAACCGCCCTCTAGGACGGTCCGCTTTCGTTCGTATAAAAGCTGCTTTCTGCTTTCATGCGCTGTTTCTCCGCATACATTGCGTGATCGGCGCGGTGCAGCCAGTCCCCGGGGGAGTGGTCGCGGTTCGGGTCCAGTGCGGCCGAGCCGGACGCGAGCCGGAGTGCGTAAGGAAGTGTCCGGCTTTTTTCTTTCAGCGCTGCGTCCAGCTGGGCGTTGATCTGTTCATACCGTGTCTCGCTCTCGTCGGGGAGAAGGCAGGCAAATTCATCGCCGCCGATGCGGTAGCACGTGCCGTACCGGCCGAACGTGAGCTGCAGCTGCTCAAATACCTGAAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCATGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //