Array 1 2881-3083 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKFS01000197.1 Schaalia georgiae F0490 contig00112, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ===================================== ================== 2881 23 100.0 37 ....................... GTCATTGACCCAGCCGGTGGCCATGGCGCCGGAGCCA 2941 23 100.0 37 ....................... CAGGTCGATCCAGCCCGTGGCCATCGCACCGCCGGGG 3001 23 87.0 37 ..C............T.A..... GTCATTGAGCCAACCGGTCTTCATCGCACCAGATGCT 3061 23 87.0 0 ................CG..A.. | ========== ====== ====== ====== ======================= ===================================== ================== 4 23 93.5 37 GTGAGGTAGTACCAGGTTCCGCC # Left flank : CCCACCTCGGCGACGACGTCGTCGCCGTCGTGCGCGAGGGCCTGTCCAATATAGCCCGCCACGCCAAGGCCACGGCCGCTGCGGTCAGCGTCGACGTCTCCGGGCGCGCGTGCAGGGGCTCCGTCACCGTGTCCATCGCCGACGACGGCCAGGGCATAGCCCCGGACCGCACCCGCAGCTCCGGTCTGGCGAATATGGGGGAAAGGGCGCGGCGCCACCGCGGTTCCTTCTCCACGGGATCCGGTATCGGCGGACGCGGCACGGCGATCACCTGGAGGGCGCCACTGGCCCAGCACCAGTGAGGGTGCCAGCGCCCGCTGTCCGCACGGCTCCGCCCGCCGCGCCCTCCCCATTCCGGCGCGCACGGTCGCGGGGCGCCCCCTGAGGAACGCCCCGCGCCGCTGACGAGTGGTCGCTAGCCGATCCACGCCCCGTTGGGGGCGAAGTTGTGCCAACGGCCTCCGATCTGCAGCCAGCCCGTGGCCATGGCGCCGGAATCG # Right flank : CGGTGGTGACCCAGCCCGTGGCCATCGCACCGTCGTCGCCCATGTAGTACCACGAGCCCCTGTCATGCACCCATCCGCTCGCCTGGGCGCCGGAGGGGGCGTGGAAGTACCATCTGCCGCCCTCGCTCACCCAGCCCGTGCGCATGTATCCATTGGACCCGAACCGGTAGACTTTGCCGCCGATGGTGAGTGCCATGTCCTTCGGGTAGGACCCGTCGGGCATCGCCCACCACCATCCGGTGCTGTCGCTCATCCAGTGGCCCTTGCTCCAGTCCACCCCGGGATCGGGCGTGGGGCTGGGATCGGGCGTGGGGCTGGGATCGGGCGTGGGATCGGCGGCCAGGACGAGTTGCACGATGCCCGAACACGCGGACCCGGCCGTGTTCTCAGCGCACAGGCGGTACTGGCCGACCGACTCCTCGTCGGCGTGCAGCGTCAACTCCTCGCCGGTCTCGTCCTCAATATCGCCCCACTCCTCGCTGTCTTTGGAGCGGAACTGC # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGGTAGTACCAGGTTCCGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 1617-367 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKFS01000033.1 Schaalia georgiae F0490 contig00157, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1616 36 100.0 28 .................................... TAGCAAGCGCATTTCTGGGGGTTGGGGG 1552 36 100.0 28 .................................... GGGCCGTAAGACGTGCAAGCGCCTTAGT 1488 36 100.0 28 .................................... TCGCGGTCAGGCGGCGGTCAGGGCGTAG 1424 36 100.0 28 .................................... GGCTCGACGACGGTCTGGCTGGCGCGGC 1360 36 100.0 28 .................................... TGGTTTCTATGGCGTGTCGCCGACGCCA 1296 36 100.0 28 .................................... GCCGAGTTGCCCGGGTTCAACGCGGACT 1232 36 100.0 28 .................................... GCCGTGTACAGGACACGGTCGTGCTGGC 1168 36 100.0 28 .................................... GAACATTGAACTTGGTGAAATTCGGTTC 1104 36 100.0 28 .................................... TGGGGGACCCAGGCGACGCGGGCAGGGC 1040 36 100.0 28 .................................... ATGGTCGGCATGGTCGTGCACGTGAACT 976 36 100.0 28 .................................... AAGGGGGCTGCAACCCGGGCGCGATGAA 912 36 100.0 28 .................................... GGGAATCGTTGATATTGACAATCTTCAA 848 36 100.0 28 .................................... CAGTCTAGGGGAGGTCGCTGCGGAGTGT 784 36 100.0 28 .................................... GGTCCCAGCACGCCTCCCGACCCTCCAG 720 36 100.0 28 .................................... ACGGCATCGACCGCCGCGTCATAATAAG 656 36 100.0 28 .................................... CGTCGGACCGCGTGTAGGCGACCATCGC 592 36 100.0 28 .................................... ACTGTTCGCCGTTGTCCACTTCCAACGA 528 36 100.0 28 .................................... TCAGGTCTGGAACTTGGTCGAACCCTCT 464 36 100.0 28 .................................... GTCCGAGTTCATGAACGACTTCATCGCG 400 34 83.3 0 .....................C.-.....-...GAA | ========== ====== ====== ====== ==================================== ============================ ================== 20 36 99.2 28 CAAGTGTATCAAGGGGAGGGGTGATTGATTCTCAGC # Left flank : GGACTCGGTGTCGCAGCCGTGATGGAGGATCTTGCTCAGCGCTACGGTCGTTATGTTGAGGGCGACGAGGAGCGGTTGTCTGTCCCTGTGTGGGAGGGGCCGACAACCGTCTGTGCGAGTAGTGGTTCAGATGGCTGATGATGCCATGTGGTGCCTGGTGATGTTCGATCTTCCTGTCGCAACGAAGAAGGAACGCCGGGAAGCTGCCCGTTTCCGCAACGATCTATTGGACTGGGGCTTTTCGATGGTCCAGCTTTCGGTGTATGTGAAGTTCTGGCCGACGGGCGGTCAGGACATGACGACGATCCGGGCGATCAAACGGGAGCTGCCGGAGGGTGGGCAGGTTCGTGTGGTATCGATCACCGATAGGCAATGGGCGACGGGATTGCGTTTCGATCAGGCGAAGCCCGTCAAGCAGCAGGGCGCCCCCGAGCAGCTCATGATTTTCTGACGCAGAATGCGCGATTTTCGGCTATTTTCCAAGGAAAAACCCCTCCCCT # Right flank : AATCGCATGGCCTCCCTGTTGTCGCGTGGTTCTTCAAGATAGCTCTCTACTTCGGACTTGAATGATGGAGGCGCTGCGATTGACCGCACCTCGTATTGTCGGCCTGTCGGGGGTGCCCCTATGTGGTGTGTCGCGGTGGGAGGTAGTTTCGTGGTTGGTTGGGGGTGTAGAGGGTGTTGTTGCGGATCGTGGCGTGCAGGGTCAGGATGCGGCGGTGGGCCAGGGCGGGGACGGCCTGGTTATGGTGTTTGCCTTGGTCGCGTTTGCGCTGGTAGTAGGCCCGGGAGACAGGGTCGGAGCGCAGTGAGGCGAATGCGGAGGCGAACATGGCGCGCTTGAGCCGCTTGTTGCCTCCGTGAGAGACGTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTGTATCAAGGGGAGGGGTGATTGATTCTCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //