Array 1 275586-274296 **** Predicted by CRISPRDetect 2.4 *** >NZ_CQDB01000001.1 Streptococcus agalactiae strain B50VD, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 275585 36 100.0 30 .................................... TTTTGACCCTGACGAAGATATTGTAAGCAT 275519 36 100.0 30 .................................... AATTCCAGTTGGAATATGCGTCAAACGAAC 275453 36 100.0 30 .................................... CGTTGTCTCATTATTTGATAAATATTTATC 275387 36 100.0 30 .................................... TTCCCTTGCTAATATTAACTTAGGAGCAGC 275321 36 100.0 30 .................................... AAATACAAAAGGTGTTACTGTTTACAACGA 275255 36 100.0 30 .................................... GAAGTATACTACGGTTAGAGATTGGCTCAA 275189 36 100.0 30 .................................... GAAACTTCGATTAGTTTGCGTACTCGCTCA 275123 36 100.0 30 .................................... ATTAGTCCTGTTGTTATGATGGATGATTAT 275057 36 100.0 30 .................................... ACAAACCTCTAATGGATAATATAGAACAAA 274991 36 100.0 30 .................................... ACACAATTAAACATAAAGAAGTGCTTATTT 274925 36 100.0 30 .................................... TCAGGAGATTGTGTGTACTCACGAATTTTT 274859 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 274793 36 100.0 30 .................................... AACCTTGATAGGCGTACTGTATGGATTCCA 274727 36 100.0 30 .................................... CTACTGTATTATCTGAAATAGTATCGTTTT 274661 36 100.0 30 .................................... TCTCGGGAAATGCAACTGATGCTGCAATCA 274595 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 274529 36 100.0 30 .................................... GCTAGCATGGCACAAAAATAGCGTTGGAAT 274463 36 100.0 30 .................................... TTAATAACTGTCCGTTTTGCCATTTCTTGC 274397 36 100.0 30 .................................... AGAGGGGAAAATATCAATGCCGAATGCTGA 274331 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTAGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : GATGGTACAAAATCATTTGTTGGTACTGATGTTTTAAAGCTGTGCTGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCGATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCAAGATTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //