Array 1 40676-41783 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYGI01000029.1 Marinobacterium halophilum strain DSM 17586 Ga0181045_129, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 40676 28 100.0 32 ............................ TGAACGCGGTGATCTTGCCTTTAGGTACTAAT 40736 28 100.0 32 ............................ TGCCCTTCCTTCTCTGTGAATTCTGCCTTTTT 40796 28 100.0 32 ............................ GTATGCAACTTGAGCGTGACGAACCAGATGCA 40856 28 100.0 32 ............................ ATACCCGCCAGACTTCATCAAAAACATGGACA 40916 28 100.0 32 ............................ AACCGGAGGTGGTGATACTGGCGGTGGTGACA 40976 28 100.0 32 ............................ ATGGCGACTATCGCATGATAATTGATTCTAAA 41036 28 100.0 32 ............................ AGGCAAAACTGTTGAATCAGTTCCTGACGTTC 41096 28 100.0 32 ............................ AGATTTTTGAGATTTAGTTGCAGACTGATAAA 41156 28 100.0 32 ............................ AGATGGATCAACTTGATGCCGATGCTCAGCAA 41216 28 100.0 32 ............................ TGGCTCTGGTAAGAGTTATGGCGTGGTTGAAA 41276 28 100.0 32 ............................ TGACCAGTATCGTCGTCACACTCAGAAGGAGA 41336 28 100.0 32 ............................ AGTCCCCCCCGTTTAGTAATACGGGGGGAAAG 41396 28 100.0 32 ............................ AAGTGGTGCCCATGCCGTCGCCATATCCAAAA 41456 28 100.0 32 ............................ GATATGCTTCCAGTTGCACATATCAACATCGT 41516 28 100.0 32 ............................ TGCCACTGCTCTGCAATGTGCATCACTGCAGC 41576 28 100.0 32 ............................ TTATCACGGTGCGATGGCTGGGTATCAACACA 41636 28 100.0 32 ............................ TGTAGAAACTGTGAGTAAAGCGATCAACGTGT 41696 28 100.0 32 ............................ GATTGAACAACTTATCACTACTTTCGACCCTC 41756 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 100.0 32 GTTCACTGCCGCTCAGGCAGCTTAGAAA # Left flank : ACCCATCTTAAATCGATCCAGCCAGTACCGGAGGATACCGTCCCGGTCGCCTTTGTTCGCCAGCAGGTAAAAGGCCAGGCCCGTATCGCAAAAGATATGCAGGCCAAAGCGCAGCTCTGGTCAGAGAAATCTGGCCAAAGTCTTGAAGAATGCCTGCAGCAACTGGAAAAGACGAAACCAAAAGGGGAGTCCAAGGCACCGTTTATCTGGATGCAAAGCCAGCAAACTAAAGCCAGCAATCCAGAGCACTCTGCCCGCTTCCCGTTGTTTATTCAAAAGGTAGTCGCAGAGCAAGCACATGATGGAATGTTTAACTGCTACGGCCTTAGCGTGGCCCGGGGCGAAGAGGTCGCTACAGTCCCTCATTTTTAACCTAAAAAATGGCTCTTTAAAAATATGTAATTAAAACAGGCAGTTACAACCTGGAGCGAAATAAAGGTATTTTTTGATATTTTTATTTAACTCCTTGTTGTAGCTGTTCTTTGTGGTACATTTTTATT # Right flank : CTGCAGCACCAGGGTCAAGGTTGTAGTGGCCTAATGATCCCGGACACCAACTTAAGGTGGTAAAGTCACCGCCGAAGAAGAGGTGTTCAATGGCAAAACAGCGTCGTTCGTTTTCAACCGAGTTCAAAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCTCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2293-284 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYGI01000044.1 Marinobacterium halophilum strain DSM 17586 Ga0181045_144, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2292 28 100.0 32 ............................ CAAATGCTCCCTGCTTGGATTGGCCTCAGAAC 2232 28 100.0 32 ............................ GCCCTCCTTCCGGCTCCACTGCTCCGCCTGCT 2172 28 100.0 32 ............................ CAGATCGCCCCACACCTTGCGGATACGGGACA 2112 28 100.0 32 ............................ TGAGTCGAGGCGTCTCAGACAGTTTTATGGTA 2052 28 100.0 32 ............................ TGGTTCTGGTAAAAGTTATGGCGTGGTTGAAA 1992 28 100.0 32 ............................ TGACGCCTCAATCGCCACACCCCACGACACTT 1932 28 100.0 32 ............................ AGATCGGATCAGGCATGTTTGCTTCCAGAATT 1872 28 100.0 32 ............................ GTCAGATGGGCCTTCAGCATTGCCCGGTTCGC 1812 28 100.0 32 ............................ TTCAGGCAGATCAACTGAGATCGTCTTGATTA 1752 28 100.0 32 ............................ ATGTCCAGCATCTGCGGGATAGTGGCGCGTCC 1692 28 100.0 32 ............................ ACATGCGTGCCGGATTGCCCTTGCGCTTCTCT 1632 28 100.0 32 ............................ GTCACCGGCCGGTAAGACCGATGGATTTGGAA 1572 28 100.0 32 ............................ GATACCCGGAATTAGCCCCGCTATGCTTCCAC 1512 28 100.0 32 ............................ ACGGCGCAATGTTCGGGTATCAGCACGGCAAG 1452 28 100.0 32 ............................ TCTCCACCGCAGCGAGGGCACGGACCGTTCTT 1392 28 100.0 32 ............................ TGTCTGAGCCTAAACAGAATGAGGTCAAGCAA 1332 28 100.0 32 ............................ GCATGGGGTCATGCTATTGAGTTCGGAGCCGA 1272 28 100.0 32 ............................ ATCCGCACCGCTCGCGCTGTACTGATAGTTAT 1212 28 100.0 32 ............................ TGACAGCAGCGATGGCGGCTACTGGCCAGACT 1152 28 100.0 32 ............................ AACCCGGTTGGTCTTTTGGTTCGAGCGCTGGC 1092 28 100.0 32 ............................ TCTAGAGCCTGAAATTGTTGACGAGATGGTTC 1032 28 100.0 32 ............................ GCCTCGGTACTTCCGAACAGCGCAACCATCGA 972 28 100.0 32 ............................ AGACGCTGCTGGCGCGATACGAAACCAGCCCG 912 28 100.0 32 ............................ GATTTAACCCGTACTATCCTGACTTCGCGGCT 852 28 100.0 32 ............................ TGATCTACGCCGATGGCAAATTGATGGGCACC 792 28 100.0 32 ............................ ATTCTGAGTGCATACGGGTCAGCCAGCGGGTC 732 28 100.0 32 ............................ GGCAAGCGCCAGCACCGAGGCTGAGGATTCGT 672 28 100.0 32 ............................ ATTGGCGACGCCCTGACGATGTTGCGGGCCGG 612 28 100.0 32 ............................ CGTCATTGCCGGAGTCCGACCACTCCCGCACA 552 28 100.0 32 ............................ GGCATCAAACTCCAAGCGGCCTTTGCTGATCA 492 28 100.0 32 ............................ TTTCCCGATCCATCTGACATAGGCGTCGGACA 432 28 100.0 32 ............................ GCGACACTTCCGGGATCAATTCAAGGGTGGTT 372 28 100.0 32 ............................ TTAAAACCGGCCTCCTATTTTGCCTTCTGAGG 312 28 96.4 0 .........................G.. | G [286] ========== ====== ====== ====== ============================ ================================ ================== 34 28 99.9 32 GTTCACTGCCGCTCAGGCAGCTTAGAAA # Left flank : ACCGGCAACGGCCACATCAGTACAACCAAGGATTGCCACCCGCTGTGGCAGAGGAAAAACTTAACTTATTGTCCGGTATTAGTTGACCACTACAGGTGCCCATATTCG # Right flank : AGCCGCGAATAAGTCCGACCTCGGGCTCTAAAATGTCGTTATCATTGCCTCAGAGGCGGAAATTCAGCACTTTTCACCCTTTTTAACCGCTCGCACCTGCCTTTTCAGGCAGTACAGGCGGATTAACCCTGTGCTCTCAACATCTGATCCACCCGCACAACGTTGGCCAGCGCGAACAGCATGGCAAGCTTGCCATCGTTCTTCTTTAGGCCACGGTAGCGTGCTTTTACAAAACCGAACTGACACTTGATGATCCGGAACGGATGCTCAACTTTCGCACGGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCTCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //