Array 1 13171-11472 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJON01000024.1 Lactobacillus helveticus strain FAM19191 FAM19191_scf0024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 13170 32 100.0 35 ................................ ATTGATAAAAGACTGATACATGTGGCGAGTAACCT 13103 32 100.0 35 ................................ AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG 13036 32 100.0 34 ................................ GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA 12970 32 100.0 35 ................................ ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC 12903 32 100.0 34 ................................ ATATGAATTCCTTGGCTAGGGCTTTGAGCACTGA 12837 32 100.0 35 ................................ TTTCTACTGGTTTACCATCTGGGTTTCCTGATCTT 12770 32 100.0 35 ................................ TGCAGAAGGTTAACAAACTTAAGCCAGATTATCTT 12703 32 100.0 35 ................................ AGTGACGTGCCATCAGTTAACCAAAAATGTACCTA 12636 32 100.0 34 ................................ CATTGACTGTTAGTGTCAATGAGATGGATTTAAA 12570 32 100.0 35 ................................ AATTAAGTATAATCATAGGGGCAATAATTGCTTAT 12503 32 100.0 36 ................................ ATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATC 12435 32 100.0 35 ................................ ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT 12368 32 100.0 34 ................................ TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA 12302 32 100.0 35 ................................ AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC 12235 32 100.0 34 ................................ ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT 12169 32 100.0 35 ................................ ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA 12102 32 100.0 35 ................................ TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG 12035 32 100.0 34 ................................ TTAAACGCCTACAAAGAACGTCACAATGCAAACA 11969 32 100.0 34 ................................ CCATTAAATAATCATTACTTGTATTAAATAAAGT 11903 32 100.0 36 ................................ GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC 11835 32 100.0 34 ................................ ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG 11769 32 100.0 34 ................................ AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC 11703 32 100.0 34 ................................ ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA 11637 32 100.0 35 ................................ TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT 11570 32 100.0 35 ................................ AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG 11503 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 26 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //