Array 1 275585-274295 **** Predicted by CRISPRDetect 2.4 *** >NZ_CHDL01000001.1 Streptococcus agalactiae strain B50VS, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 275584 36 100.0 30 .................................... TTTTGACCCTGACGAAGATATTGTAAGCAT 275518 36 100.0 30 .................................... AATTCCAGTTGGAATATGCGTCAAACGAAC 275452 36 100.0 30 .................................... CGTTGTCTCATTATTTGATAAATATTTATC 275386 36 100.0 30 .................................... TTCCCTTGCTAATATTAACTTAGGAGCAGC 275320 36 100.0 30 .................................... AAATACAAAAGGTGTTACTGTTTACAACGA 275254 36 100.0 30 .................................... GAAGTATACTACGGTTAGAGATTGGCTCAA 275188 36 100.0 30 .................................... GAAACTTCGATTAGTTTGCGTACTCGCTCA 275122 36 100.0 30 .................................... ATTAGTCCTGTTGTTATGATGGATGATTAT 275056 36 100.0 30 .................................... ACAAACCTCTAATGGATAATATAGAACAAA 274990 36 100.0 30 .................................... ACACAATTAAACATAAAGAAGTGCTTATTT 274924 36 100.0 30 .................................... TCAGGAGATTGTGTGTACTCACGAATTTTT 274858 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 274792 36 100.0 30 .................................... AACCTTGATAGGCGTACTGTATGGATTCCA 274726 36 100.0 30 .................................... CTACTGTATTATCTGAAATAGTATCGTTTT 274660 36 100.0 30 .................................... TCTCGGGAAATGCAACTGATGCTGCAATCA 274594 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 274528 36 100.0 30 .................................... GCTAGCATGGCACAAAAATAGCGTTGGAAT 274462 36 100.0 30 .................................... TTAATAACTGTCCGTTTTGCCATTTCTTGC 274396 36 100.0 30 .................................... AGAGGGGAAAATATCAATGCCGAATGCTGA 274330 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTAGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : GATGGTACAAAATCATTTGTTGGTACTGATGTTTTAAAGCTGTGCTGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCGATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCAAGATTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //