Array 1 44652-43451 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUWA01000106.1 Clostridium botulinum strain 713_CBOT 382_89760_1793432, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 44651 30 100.0 35 .............................. TTTAGTTTATAGAGAAGATACCGACACATTAGAAA 44586 30 100.0 36 .............................. TAATGTTATTTCTAGCCTTATTTAATGTAGCTTTTC 44520 30 100.0 32 .............................. CAATAGATAAATTAGCGGACAAAATCAACATA 44458 30 100.0 36 .............................. TTAAAACTAAAAGTGATAAGGTGTATACAATCACAT 44392 30 100.0 35 .............................. AAAAATTTCCAAAAGTTTTCGTTATCCTCTAACCC 44327 30 100.0 34 .............................. ATTATACAAAATTTTAAATTTAGCTGAATTTATA 44263 30 100.0 35 .............................. AACAAACAACCTTGTTGCTCTTCTTCAAATCTGTT 44198 30 100.0 34 .............................. ATAAATAGGTACTTGGGTCTATCTTCTTCTTTTG 44134 30 100.0 36 .............................. GAAAATGGATTTGATGAACGAAAACACAGAAGAAAA 44068 30 100.0 36 .............................. GTCTAAAGTTAAAAAAGGTAGTAAAAATATGAATAA 44002 30 100.0 34 .............................. CAAATTCTTCTATATGTTCTACAGGAATATTCAC 43938 30 100.0 34 .............................. GATACTTCCTGTTGAGTATATCCTTTTACATCTC 43874 30 100.0 36 .............................. ATAGCAGTTAAGTTAAGTACATCTGAAATTGTTACA 43808 30 100.0 35 .............................. GAAAGCTTACAAGAGAGATTAGAAGAAGAAGGGTA 43743 30 100.0 36 .............................. GATATAAAAGCTCAATTATGTACTAGAGTTGCTCTT 43677 30 100.0 36 .............................. AGAATTTCAGCCTTGTTCATTTCCTTGTCTATAAAT 43611 30 100.0 35 .............................. GAAGGACAAATGGTAGTTTCAATATTTGCAATAGG 43546 30 90.0 36 .C...GG....................... CTTGCTACAGTCTTAAGGTCTTATGTAACCCAAGGG 43480 30 83.3 0 .G..TG......T................A | ========== ====== ====== ====== ============================== ==================================== ================== 19 30 98.6 35 GTTCAAAGATAACAATAGATGTATTTGAAT # Left flank : GTTAACTTTTGATATTTTTAACGTTACATTGAATAAAAATATCTTCATAACTACACCAATGGAGTTCAATGAAGCAAATAGAAAGATTTTTACTGCTATTGTTGCTGGAGCTATAAAGAAGGTAGATGTAGATGTTACTTTCTTATTGCAATTGAGTTTTGATGAAATTGAAAGTATGGTTTAGAAACAACAATATATTAGGACTTGAAGGTTATGATTGTATAACCTTCTTTTTTAATTTACAGGAAAGAATAACGATTTTGAAGTTGTAAAGCTAGTGATATAAATAGTTTTTGGGATTTAAAACTGTAAGTTTTAAACCACAAAGTGGACGTAGCGATAGACACCTTTTTTACCAAGTGATTTTTCTGAAATGGCTTTAATAGGAGGTTTAAGGAGTATAGAGAAAAAAGTAATATACTTGGTAAAAAACAGTAGAATTAGGATGATTACTATGTTACAATTATATGGTAGATTATTGAAGTAAAGTAAATACTTTG # Right flank : ATTCATCTCTTGAGTACAAAATTTAAGTGCATATTTGTTTATAAATAATTAAGGTGTAATGTATATTCTATTGGTGTTACTAGAAAATAAAAAAAGCGAAGAAGTTTCTATTGTATCAAAATAATCAATAAAACAATTTTTTGAGGGTGATTAGGCATCCTAAATGTGAGGTGATTAATACACTCACAAAGATATAACATAGTTTTATATTATATCAACCTCCAGTAGAATTACTGGCAAATACATCTGTAAGGCATACTTAAATGTATGCCTTTTATTTTAAAGCAAAGGGGAGTAAGGATGATTACAGTAAGAAAGCTAAAAATTGTATGTAAAGATAAAGAGTTTTATGATTTTTTTAAGTGGGAACAAAGAGAACAAAACAAAGCGTTAAATATTGCAATAGGATTAATACATAGTAGTACAGTTTTAAGAAGTATTGATAGTGGAGCAGAAGCACAACTAAAAAAATCTATAGGGAAACTAACTCAAAACATTGA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAGATAACAATAGATGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 13372-14575 **** Predicted by CRISPRDetect 2.4 *** >NZ_JUWA01000058.1 Clostridium botulinum strain 713_CBOT 210_33844_639765, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 13372 30 100.0 34 .............................. CTAATGATGAAATATTACTACAAAAAGTATGGTA 13436 30 100.0 35 .............................. TTGAAGAATCTGTGAGAAAGAACGCCACAAACATG 13501 30 100.0 36 .............................. CATTCTATGCAATAGCTTTATGAAACTTTCCTAAAA 13567 30 100.0 34 .............................. AATATGAATTGGCAAAAATTACAAGTCAGTGTTA 13631 30 100.0 36 .............................. GAGATTGATGAGGTGGGAAGTAAGAAACGACAAAGA 13697 30 100.0 36 .............................. TCCTCTATATTTAATTTATTTCTTTTAATAAAATCA 13763 30 100.0 35 .............................. TCAATAGCTCCAACCTTATTGTAAATTTTAAAACT 13828 30 100.0 33 .............................. AAGTAAACAAGAATGGTGGATAACGAACTATAG 13891 30 96.7 36 ........G..................... GTTTTCAGGCTCAGGAAGTGTTGGAGATGCATGTAT 13957 30 96.7 35 ........G..................... GAGTTTTATTAAAAAGAAAGATTCTATTTAACCCT 14022 30 96.7 35 ........G..................... GAGTTATTATACAAGCCTTTTAAGTCACGTATACC 14087 30 96.7 35 ........G..................... GTAGCTCCATCTAATAGTAAATGTAGTAAATAATT 14152 30 100.0 34 .............................. TGGAAAATAATTTTGAAAATTATATTCAAATTGT 14216 30 100.0 37 .............................. ATAATTATATATTGGTAAAGAATACTATAGTGGTTAA 14283 30 100.0 35 .............................. TAGTAAAGATTTTAACACAACCAGTGAGAAAATAA 14348 30 100.0 35 .............................. TTGTAATATCTTTGTATAAGTAGTGGCGTTAATTT 14413 30 96.7 36 ........G..................... TATCGTATATTAGCTGGTATTATTGCATAATAAGAT 14479 30 96.7 37 ........G..................... ATAAAAAAATATCATAAAAATAACAAAAAAACCGTAA 14546 30 90.0 0 ........G......A.........A.... | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 98.4 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : CATAAACAAATAAATATATAAATATAAGAAGATATATTGTTATATTTATATAAATATATGTTTTTGTAAATATATGAATATACCAATATATAAATATGGGAAGCTCTAGAATTATTCTAGGGCTTCTTGTTTTATCTTTAGGAAATCATAATTGCAATTAAATTGTGATAGCTTCAATATTTTATTGCTAATGAAGTTTCATTTGATCTTAAAGTATAAAAAATAAAATATATGCAAGGAAGATTTTTCAGAGACAAGCTTGGAAAATTCATAGAAGCAAAAAATCACGACTTCACAATGGCCTCGTGAATTTTTTATAAATAAAATTTTACCAAGTGATCTTGAAATGAAAAATCTTGAATCAACTGTTATTACAGTGATAGAAGATGAAAAAAGAAAAATGAAATCCAATATTCATTTGCTTGGTAAAAAATTTGTAAAACTTGAATTAATAAGTAATGGGAGAGATAATAGATTTATTGAATGGCTTTTTTCCAATG # Right flank : TAAGAAAAGTGAATTTTATTTTTGACATCTGTGTGAAGCTAATATAAACAAGAGATGTATAGAATAAGATAGCATGTCTTTATTTATCATAAAAGAAAAACCTAGAAAACTAGTTTTTTCTCTGTGAAGGAATATAACCAATAAATTAGTTTAAAAGAGAAAGCTGTATGTTTAAGATATCAATTTAGTCCTTAAAAAATTATGTAATAAATCTTTGCCAGTTCTAGTCTTTATAATTTCTTCCATCCTATCCAAACTAATCTCATAATATCCTTCTTCAAAAACATTAATCATAAGATCAGCTTCAACTAAAACTTGAAAATCCATTCTATCAATTTTTTCATAGCTGTGATGCATCTTTATTAAATAAAGTATTCTATGAATTGCTTTTTCTTCATATCCAGCATCTTTTAAGAACTCACGAGCTAATAGGGGAGCCTCTTTTCTTTGAAGTTCTTGGCTTGCATCTCCATATTTTTCTTTGCAAATTTTTATTCCTA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : GATTAACAGTAACATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //