Array 1 166939-167206 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIZGI010000020.1 Pectobacterium carotovorum strain A694-S13-N17 A694_(paired)_trimmed_(paired)_contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 166939 28 85.7 32 A..T........G.....C......... TAGGGTTGGGTTGACTTGCAGCGCGTCACCAA 166999 28 100.0 32 ............................ AATACGTTTTTACGCCGCACGTTGGGTGAAAG 167059 28 92.9 32 ............GC.............. AGGTAATGCGGTAAATGTGCTGGCCCGGATCT 167119 28 92.9 32 .....T.....C................ TTTAACTTTTCTTGCGCACAAACTCGTGCTGG 167179 28 78.6 0 AC.........A.C......T.A..... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 90.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AACCGACGGACGTCGGCGGCACGCTGTTTGGCGGCATGTTTAGCGCGATGTTCGATCTCATCTACTGGTCTTGCGCGGCATCGGGTTTCTGCTTTCTGGCGCTCTTTCGGCTTTCAGGATGGCGTGTTGCCTGGATACTCGCGGGGCTGGTGCAAATCGGTATCAGCGCCCTGTGGCGGATTCAATATTGGCAGGAGTATGAAAACGACAATGTGATACTCTCCCCGATGCCCGGTGAGCTGTATGTTTCCATGCTGGTAGGCGCAGGCATGGCCGCCATCGGCATCGTGAAATATCGACACGCGCAGCGCAACCCAGTCGCTCAACGCCCAACCTATGCGAAAGCCGTCGCTGCATTGCTGCTGATCGCGCTTTATCTCGCGCTCCCGCTGCATCTCTACCTGCGTGAACCTCTCCCCTACTGCGCCTTTAGCCCTGACGGACAGCAGTTAAGTATCTGTCTGGGAGACAATGACGAGCGGATTATTGTGGAGTGATGG # Right flank : AATAAAGCTCACCTAAAATCAGCAATAAAAAACTCATAGGCAACGCGGCCTAAAAAGCTGGTAGTCTGTTTGGCCGACTGCCCGATACTGTTTAGGAAACGCGATGTACCACATTGATGATTTCGATCTGAAAATCCTGACGCTGCTACAGACGAACGGCCGCCTGACCAATCAGGAACTGAGCGATCTGGTTGGGCTTTCTGCCTCGCAGTGTTCCCGCCGTCGCATCGCGCTAGAACAGGCACAACTGATTCTCGGCTACCATGCCCGCCTGTCGCCGAACGCGGTCGTGCTGGAATGTCTGGGGTTGATTGAGGTGCGACTGATCAACCACACCAGCGAATACGTTGAACGCTTTCACCAGATGCTGGGGGAAGTGGATGCCATCATCGACGCCTATAAAACCACGGGTGATGCCGATTATCTGTTAAAAGTCGCCGTGGCAGATCTGCCCGGGCTCAGCACGCTGATTAGCCAGATTCTGTCGCAGAACAAGAGCG # Questionable array : NO Score: 3.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //