Array 1 777055-773366 **** Predicted by CRISPRDetect 2.4 *** >NC_007164.1 Corynebacterium jeikeium K411, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 777054 29 100.0 32 ............................. GCCCTGGTGGAGTCTCGCGCGGTTGTGAAGCA 776993 29 100.0 32 ............................. AAGCCGACGAGCCCCGACCACAATCCAGTCAC 776932 29 96.6 32 ............................C AATTCGGTTTCGGGCTGGAGGAGTCCGCAGGT 776871 29 96.6 32 ............................T GCCGACGAGGTTTTGTTGTGCGTCTTTGTTGT 776810 29 100.0 32 ............................. TTGTAGGTTGTGCCATTCTTCCTCTGTGGGTG 776749 29 100.0 32 ............................. CAGACCTGAGAACAGACTGACCAATCCACTCG 776688 29 100.0 32 ............................. CGTCTCGCTCAAGATCGCCCGCGGATTCTGCA 776627 29 100.0 32 ............................. TGCCGATCCCGTCCGGGCTGCAGGCTGCACTA 776566 29 96.6 32 ............................A ACCTTGTTTTTGCAGGTTAAAGGGGGTGTGCC 776505 29 96.6 32 ............................T CCACGCCCGGCACCCACCGGCCAAAACCGCCC 776444 29 100.0 32 ............................. AAACTGTAGAGGCGGAGCCTGTAGAGGCAGAG 776383 29 100.0 32 ............................. TCCGTTGTGAAGCTGACGGGGCTGATGTCCTA 776322 29 100.0 32 ............................. GTCACCCCGCTCGAGGAGACAATCAAGGGTCT 776261 29 100.0 32 ............................. GCAATGCCGCCCGAGGTCGCAGAGGCTGTTCT 776200 29 100.0 32 ............................. CACCTGGCGGAGACGTTGGGTAAAGCAACGCG 776139 29 100.0 32 ............................. TCACGCACAACCTTCAGAGTGCCGAACATGGT 776078 29 100.0 32 ............................. AAGTATGAAGATCAGCAGAAAGACCTGTCTGA 776017 29 100.0 32 ............................. TCGTCTTTCCAAGTCGCCCAAAGGTACGCCCG 775956 29 100.0 32 ............................. CACCCAGCAGGCCTGCGGACTCCTCCAGACCG 775895 29 100.0 32 ............................. CTTTCGGTAATTTCGTTAAGTGGATTTGGGAT 775834 29 100.0 32 ............................. TCGCCCAAAGGTACACCCGGTGATCGGCTACG 775773 29 96.6 32 ............................T CCGTAGTATTTCGGCGGCCTCGGGTATGGTGT 775712 29 100.0 32 ............................. GGACATTCGCCAGACCTGGCTGATACTGTCCT 775651 29 100.0 32 ............................. ACAGGCCAGCCATAGCATCAGACGCGAACTCC 775590 29 100.0 32 ............................. GCTACTGACTGGCAGAACCCGGCAACCTATAA 775529 29 96.6 32 ............................T GATTGGGATACCGCCTGGCATGCTGCGAACGA 775468 29 100.0 32 ............................. CTCTCCCACGGTGGGGCTAGTCAGGTCTGTCA 775407 29 100.0 32 ............................. GATGCGCCGGTGGTGTGCGAGATTCTGCCTGG 775346 29 100.0 32 ............................. CCGATCTGGGATGCCATGTCTACGGCTGCGCT 775285 29 100.0 32 ............................. CCTGGACCCGCCCGCTGCGCTATGCTGCGCGC 775224 29 100.0 32 ............................. CTGATCGCAGGCAACGAGAACGTCAAGGAAGA 775163 29 100.0 32 ............................. TAATAGCTCGCGGCCACGATGGCGAGATTAAA 775102 29 100.0 32 ............................. GGCGATAAGATTCCCGCGTTGCTGTCTGACCG 775041 29 100.0 32 ............................. CTGATCGGTGAAGCTTTCCAGGCTATGGGTAG 774980 29 100.0 32 ............................. GCGCAGACTGCGGCGCAGACCGCGTTGAACCT 774919 29 96.6 32 ............................C GACTCAACACCACCGGGGGAATTGCGGCGGCG 774858 29 100.0 32 ............................. AGGAGCTTAGCAATGCAGAAGATTCTGCTTGA 774797 29 96.6 32 ............................T TCCTCCGATAGTGACCAGCACACCTAGTGCGA 774736 29 100.0 32 ............................. TTCCACTCTGCGTATCGGCGGGATCCGTCGAC 774675 29 100.0 32 ............................. CGGATGAATCATCGGCGGTCGCCCGGCACGCC 774614 29 100.0 32 ............................. ATTTCCGATGCTAACACTAAGGCGATTGAGAC 774553 29 100.0 32 ............................. CCGAACTGCTGCAACGCTGGACCAGACTTCGA 774492 29 100.0 32 ............................. TGCCCGTATCAATATCAACGTGGGCTGCATCC 774431 29 100.0 32 ............................. CTTGCCGCTGCTGCGCAGACTGTTATGGCTGC 774370 29 100.0 32 ............................. CCGAGGGAGAACCAAAACGGCGGGGGTGGGGT 774309 29 96.6 32 ............................C GCGGCGTCGCGGCCACCCTTGGCGATGTGTTC 774248 29 100.0 32 ............................. CCCGTTTAGCCCGAGAGCGCGCGAAGTACAGC 774187 29 100.0 32 ............................. AATCTTCGAGCCGTTACCGCCGTTGATGGTGA 774126 29 100.0 32 ............................. CCTTTTCACCAATCCAATCAAAAACGGGTGCG 774065 29 96.6 32 ............................T CATCGGCGGTCGCCCGGCACGCTCTGGGTGAT 774004 29 100.0 32 ............................. TGGTTCACTAGCTTGACATCTGTCACTAAGGC 773943 29 100.0 32 ............................. GCTAAAAGCTTTAAGGAGTCCATCGGCAAGAT 773882 29 100.0 32 ............................. TGACGACGAACGGGTTCGGAGACGAGATAGAA 773821 29 100.0 32 ............................. GCTAAAAGCTTTAAGGAGTCCATCGGCAAGAT 773760 29 100.0 32 ............................. TACCAGAAGGCTGTGGCTTCTGGGAATTCTGG 773699 29 100.0 32 ............................. GAGGGTTCATGAATCAGACGCACAACGATGCT 773638 29 100.0 32 ............................. GTGTTTGAGTGCGGCGGGGTGGCCAGTGTCAG 773577 29 100.0 32 ............................. TTCGCGCTGTTCAGTGTCAGAGAGTGCCATGA 773516 29 100.0 32 ............................. TCGATCCGGTTGCCGTTATGTAGGTTCACACA 773455 29 100.0 32 ............................. TCCAGGTCCCAGTGGAAGAAGGCTTGTTCCTG 773394 29 93.1 0 .......................T....T | ========== ====== ====== ====== ============================= ================================ ================== 61 29 99.3 32 GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Left flank : TATTGATGCTGAGCTGGTGTTGTGGTCGGACTTGGAGGTCGTGGCTTCCAAACGCAATTGGTCAGACGATGGGCCAATCAGATGATGGTCTTGGTTGTATCTGCATGTCCTGCGGGTCTTCGCGGTGACCTCACAAGGTGGCTGTTGGAGATTTCTCCAGGTGTGTTCGTAGGGCGCCCCAGTGCCAGGGTGCGCGACCAGGTGTGGGAGCGAACATGCGACCTGGTGAATGATGGCCGAGCGATCATGGTGTTCCAGGCAGCAAACGAGCAGGGCTTTGATTTCAAGACTCACCGGCATAACTGGGTTCCAACTGATTTCGATGGGGTGAACTTGATTACGCGCCCCAACAACCGGGCAGCTTCGACGAGGCGGCGCGGATGGAGTAATGCGCGGAGGAGGTAAAGCGTCGGTGATCGTTCGCTAGTCCGGTAGGCGGTGGTGAAAACAAGCTGAAGTAGAATTGGCCCAACGGCTCAAAGAACCACAGCTCAGAGAGT # Right flank : CAGGGAGTGCTATCTTGACGCGATTTCCACGGATCACCAGCATTCACCGCTCCTGAAAGGCGGGACGACCTCCAAAATGAAGAAAGCTTTCTATTCAATGCTTAACAGCAAAGAAATTCAATAGAAAGAAACGAAACTAAATTGAAAAGATCGTGGTTACTGATCTTCTGATACTCTCACATAATCAGGACGATGTTCCTTTAGGAAACTCCGTAAGCATTCGCCTGGGTTACTGCCAGGTGAAAAGAGATCGAGGATCTTATCCAACATGTCAGGCGCGATAAACACACCACCTTCGACCGAGTAGTAGACCGCATTCTCGAGTGCATATTCGAATTCTCCCCCTAAGGCGGGAGTAAAGGCGTGGTCAATCCCTGCAGTGACGAACTGCTCTCCATAACGGGAAAGAAATTCTTCGAATACATCCATCGAGGGATCCGCACGCATCTTACGATCCTCTCCGCTTTACCGCACGGTAGCTAAAAACGTGATTGTAACTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-5] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //