Array 1 90624-93384 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFJW01000004.1 Collinsella sp. An2 An2_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 90624 32 100.0 33 ................................ TGAGAACACGAGAGGCTCCCATCCTATCGATCC 90689 32 100.0 34 ................................ GCCAGCTGCGGGCCGTTCATCGGCTTGCGCCGCT 90755 32 100.0 35 ................................ AACGCGCTCAAGGCGCGCGTCGCCGCCGAGATGTC 90822 32 100.0 34 ................................ CGTCTTGGAGGTGGCCTGGGAGATGCCGAGGAGA 90888 32 100.0 35 ................................ GGGTCGGCCATGTCGACCGTGGCGCAGGGAACCGT 90955 32 100.0 35 ................................ CGGTGTTCGCTCCGTAGCGCGGAATCCACACCCAG 91022 32 100.0 35 ................................ GCGATTACGCGGTCGGCGTCTGCGTGCTGGCTCTG 91089 32 100.0 35 ................................ GAGATGGCGGCCGACGGCGCGCGGAAGAGCGACAT 91156 32 100.0 34 ................................ GAGAGGGCGGCGACGAACGTGTCTAAATTCAGGA 91222 32 100.0 33 ................................ TGCAACGTGGGGAACGTGGTGCAGCAGGGCTTC 91287 32 100.0 35 ................................ TCGATGGAATCGCGGCAAAGATGAACGGCACGTAC 91354 32 100.0 35 ................................ ATCTATTATTGTTCCGCTTATCACCAATCACCCAA 91421 32 100.0 34 ................................ TACATCGGTTACAAGAACTATGACGTGGTGGAGG 91487 32 100.0 37 ................................ CCAGAGCAGAAAGGTGAAATTGATTATCGCATGTGGC 91556 32 100.0 33 ................................ CTGGACCTTCCCCTCGACGTCCAGACCAGCGCC 91621 32 100.0 36 ................................ AACAACGGTAGCGCCCCGTCTGTGGCGGACATCGCG 91689 32 100.0 36 ................................ GGGACGCCAGCCGATGCGTTCCAGATCACTAAGGGC 91757 32 100.0 34 ................................ GATAGCTCCCCGGTTGAGGGGGTGACATTGCCAG 91823 32 100.0 35 ................................ TATATGAATAACCTCTATGGCAAGTATGGGACCAA 91890 32 100.0 34 ................................ AGCAACCCACCGTTTGATGATGTGTATGCTGAAC 91956 32 100.0 35 ................................ AACATGGACCGCGCTGAGTTCGTGGCCGGCGTGGT 92023 32 100.0 35 ................................ AAGATTGTTAATCGCGCTCATGCTCGGGACGGTTG 92090 32 100.0 35 ................................ GGTTCGATGAAGTAGTCGTTAAGGTCGGCAAACTT 92157 32 100.0 35 ................................ TTAGGTTTGCATTGCATAACACGCCCGTTGAGCCG 92224 32 100.0 33 ................................ ACGAGCGTCGGCACGGTCCCCGGCATCTCGGGC 92289 32 100.0 34 ................................ TGATTGGTAGTCAGGGCCATAGGTCACTCCTTAC 92355 32 100.0 34 ................................ GGTTGTGTGTGTCCTTATTCGTACGTCCACTCGC 92421 32 100.0 33 ................................ AAGGTAGGGCTTGCGCTCGTCCGTGTGGTCCTT 92486 32 100.0 36 ................................ CGCGTCGCTGCGTCCGTGCTCGTTGGTGGTGATGAT 92554 32 100.0 34 ................................ ACAAGCTCTGAGGACGAGGACGACGTATATAACA 92620 32 100.0 35 ................................ TTTTGCGGGACTGTCTACACAGGCGCAATCTATAG 92687 32 100.0 35 ................................ CAGTAGTCCGTGACACGCTTGCGTGCACCCGGCTG 92754 32 100.0 35 ................................ TACATCGGTTACAAGAACTATGACCTGGTGGAGGT 92821 32 100.0 34 ................................ TTGACGTTTGCGCCCTGCCGCTCTACCGCATCAA 92887 32 100.0 35 ................................ ATGTTCAGGCCGGTCCGGCTGCTCGTCTGGTGCTC 92954 32 96.9 34 ...........T.................... CAGGCGTGTCAGGCTCAGAGCGCGACCAGGCGAT 93020 32 100.0 33 ................................ AACTTACCACCACCGCCGCCCAGACGCTCGCGC 93085 32 100.0 34 ................................ GACGTGGCCTGGCTGATTCCCAGGAGCGCGCCGA 93151 32 100.0 36 ................................ GGAAGGAAGCGAGGTGGACGTATCGACGGAACCCTT 93219 32 96.9 35 ...........................A.... GTGATTTGCAAGGCCACGGAGGGTACGAGAATCGT 93286 32 81.2 34 ....T..T.......A..T.....AC...... TTCAGCGTGTTGTGGTGCGGCGTGCTGCGCTTCG 93352 32 78.1 0 ......T.T.....A.A..T.....C....G. | G [93374] ========== ====== ====== ====== ================================ ===================================== ================== 42 32 98.9 35 GTCGCGCCCCTCGCGGGCGCGTGGGTTGAAAC # Left flank : GATCTTGACGATTATCCAGCGTGTATTTGGAGATAGCCATGTATGTTCTTGTCACGTATGACGTAGCGGGATTGGATAAAGGCGGAGCCCGGCGCTTGAGGCGCGTTTCAAAACTCTGCTGCCAGTACGGGCAGCGGGTTCAGTATTCGGTGTTTGAGTGCTTGCTGGAGCCGGCTCAGTTTGTCGAATTGAAGGGTCAGCTTCTGAAGGCTATCGACCCGTTGCAGGATAGCATTCGGTTCTACAATTTAGGAAAGAATCGAAACGCACGCGTCGAAGAATACGGTGCAAAGAAGTCGTATGACCCAGAGGGATTCTTATTCATATAGGAGCGTTTTTACTTGCGCGAACCTCAAGCTGTGGCGCGGAGTGGTGAGGTTCGCGCAAGAGTCCTTAGCTTTCTGAGTGTATATTGAGCTTGATTGACGGACTTCTTTGTGGCTGTGTATTTGAAACGAATAAAATGAATAGGGATATTCAGTTTTCTGACTGAATTGACA # Right flank : CATGGGCGGGGCAGAGGAGAATGTGCTTGAGGATGAGTGCAAGCGAAAGAAGCGGGAAGTTCGCTGGCTATTTTGAGACGGCGATAGACTTTCTTAGATTAAGCTCACGAAGCGTGAGAGGTGCCAGGCATCTGATTTGTTGCGGTATGGTCTCTCAGCTTTTGTAGCAGATTCCAAGATTGAAGCGCCTTCTCCTCGGCTACGCCACCTTGCCGAAGGCTCGCCAGGTACGCTCGGCGGCCGTGCTGGGCCTGTGGAGAACACCCCCCCGCCCTCGGGCTCCTTCATCGTCTCAATGTTCCTTCTCCGGTGCTGTTGTGCTTTGTTGGCCGCTGGTCTTCCGGAGCGGAAGTGAGGACGCACGAGTTCCGCGTATTGCTAGGGAGAATAAAGGTCTACGATGATATGGACCCATCCTGATGGCAGCCAAAGAACGTTGTAGCGCTCGATATGCGTGGCTGCAAGAGCCTTATCGAGAACACGCATGCCAGGGACAATGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGCGGGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //