Array 1 9356-10704 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLXN01000115.1 Enterobacter kobei strain 8706 contig_44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 9356 28 96.4 32 ..T......................... ACAATGTTTGCCAATACAAACAAAGTCGGCCA 9416 28 96.4 32 ..T......................... GTCCAGATGGCTTAAAACCAGTCGTTTTCTGG 9476 28 96.4 32 ..T......................... GTCGCGGTTTGGCAGCGCATCGCAGATATAGA 9536 28 96.4 32 ..T......................... TCCTCGAGCTTCTAATTCAAGAGTGGTATGTT 9596 28 96.4 32 ..T......................... AATGGCGAGCCCAGCAACTTCCGACGCTTCCA 9656 28 96.4 32 ..T......................... AACGCAGCTCTGCGCGCTCAAGTCCATCGCGG 9716 28 96.4 32 ..T......................... ACGAACTGCGCCCGGATCTGCACCCGACACCA 9776 28 96.4 32 ..T......................... GCTGCTCTCCATGTCTTTTGCGCGCCGCATGA 9836 28 96.4 32 ..T......................... ATTATGGCGAGAAAATCTCTGAATATTCGGTA 9896 28 96.4 32 ..T......................... GTTATTTGTGACGCCATTTTACTGGCCGCCGG 9956 28 100.0 32 ............................ AGTCTGCGATTTGTTTGAGTAACGCCACGTCA 10016 28 100.0 32 ............................ TGAATTAGCTGTTCTTTACTGAACCCCTGCTT 10076 28 100.0 32 ............................ ATTAGGTACTGCCAGTGCTCAGTCTGCTATGG 10136 28 100.0 32 ............................ AGCGACCGTAGAGATTGAGGGAAACCCTCCCG 10196 28 100.0 32 ............................ CTGGCGATTAGCTGATATAGATAAATTCAACT 10256 28 100.0 32 ............................ ATAATTATGCAGTAACCCCCTTAGTGCGCATA 10316 28 100.0 32 ............................ CGCTGAACTTCGCGTTCTGTTTTCACCAGTCC 10376 28 100.0 32 ............................ AAGCGGATTTTGAGGCTACCGGAAAAATCTAT 10436 28 100.0 32 ............................ GCCGCCGCACCGATATTACGAACAGCATGGAA 10496 28 100.0 32 ............................ TATCGTGCTGACTTTGAGGATTTGCCGACCAT 10556 28 100.0 32 ............................ ATCATCCCGGGTCAGCTCGTCACCAGCCGGTA 10616 28 100.0 32 ............................ TTAAATGCGCAGAAGTCACCGAAGTTGTTCAG 10676 28 89.3 0 C.C............C............ | C [10700] ========== ====== ====== ====== ============================ ================================ ================== 23 28 98.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGCCGGGCCACGTTACGTTCATTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCAGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCAGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTAGGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATGAATGGAATGGGTGTTTTTTATGCAGGGGGTATAAGAAGAAGGGTGTTCGACCCTAATTTTTAGTGCGTTTGTAAGGCATTGATATTAAATGGGTATTTTGAGGGGGTAAAAAAGAGGGTAAACGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGGGGGGATATTATTTGA # Right flank : AATAGAAAATAAGGTCTCCCCCTCCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCAGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCGACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 332-124 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLXN01000088.1 Enterobacter kobei strain 8706 contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 331 28 100.0 32 ............................ CTATATGCTGCGCCGCCTCCGCTACGCTCAAA 271 28 100.0 32 ............................ ATAACGATGGTTGTACGGGATACCATCGATGG 211 28 100.0 32 ............................ ATCGAAAGGAAACATCGACAACTGAGCGAAGT 151 28 71.4 0 ...................A.ACCTCTC | ========== ====== ====== ====== ============================ ================================ ================== 4 28 92.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CACTCCCGCAGACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGAGAACGAAGCGGAAGAACCGCGACAAAAAGAGTGGCTGCTCGAAGATACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTACTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGATTACTGCATGACTTCACGCATTCAATGGCGGCAGATGTGGTATCTCCTCATGATGCCGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCGCACCGCCAGGGGCTGTCCCTTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCGTTGATTTATAATGTTTTTTTGCGTTGCAGAAAAAAGGGTTTTGCCTGTTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCT # Right flank : CAAACCAACCCACTGTAATATTCACCAAACCTATTTAAAACCTTATACCATCCAATCTGCACTCTCTATTTTCACAATAGATAAAAAACCTATTCACGCATAAATTATATTCCAGCAAATATAT # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 15631-15363 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLXN01000088.1 Enterobacter kobei strain 8706 contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 15630 28 100.0 32 ............................ CACTCGCGAGAATGAGCAAGGCGGCAGTCTAT 15570 28 100.0 32 ............................ GAACCACGGATGGATAAGCTCGCCCGGGCCGG 15510 28 100.0 32 ............................ GGAATACTTTCAGGATTCGAGCCGGGGATCCT 15450 28 100.0 32 ............................ GTCTTTTGCCCGCATATGCGCGTTTTTATAAT 15390 28 78.6 0 ...............C.....AACC.T. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGCCTCTTTACGCGACCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTGATGGTAGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGGGCTCTGGTATGAAGGAAAGGGTCTATGGACCCTTTTTTATTGGCTGTTTGTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAAAGTGATAGGTGTAGATTGTTCCA # Right flank : TGTAGTTCGGCACAAACAATGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGAGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCGTCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCTGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGCG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //