Array 1 30857-29119 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQQM01000046.1 Phocaeicola vulgatus strain MCC221 NODE_49_length_48440_cov_44.019672, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 30856 47 97.9 30 ...A........................................... ACTTGCATTCTTGGCTATTATCAGGCTGGT 30779 47 100.0 30 ............................................... CCTCGGGTGTACGCTTAGCACTCGTTACTG 30702 47 100.0 30 ............................................... ATGTTTTCATTTGTATATAGCTTGCACTTC 30625 47 100.0 30 ............................................... GAGGATACAGGTAGTTCCCCTTGGTCAGGT 30548 47 100.0 30 ............................................... CAACCTTAGCAGTAAACAATTTCTTCGAAC 30471 47 100.0 30 ............................................... AATCGATGCCGCAATGTTTTCCCCATGCTT 30394 47 100.0 30 ............................................... TTCACACGGCTGATCCCCGTAGGTTCAACC 30317 47 100.0 30 ............................................... ACACCGATACAACCAGTATAGTCACAATCA 30240 47 100.0 29 ............................................... ACTTGTATCTCGGTCTCTTGTCAAAGTGG 30164 47 100.0 30 ............................................... TGAATCTGAGTGCTCAAGTAATGAGAGCGG 30087 47 100.0 30 ............................................... TCTTCTCATACTCTATGCCTGTTTTAATGA 30010 47 100.0 30 ............................................... TCATACCACAATTCTTCCTCATTGTTATTG 29933 47 100.0 30 ............................................... GAAGCTGTCTTGCCTTTGCGCACTCCGTGC 29856 47 100.0 30 ............................................... AACAGTAGATTGAGTAGGATGCATCTGTGA 29779 47 100.0 30 ............................................... GTGTATGACGTAATATATGAGTTTAAGCCA 29702 47 100.0 30 ............................................... AACATCATCAATATATCCCTGTCTCTGAAT 29625 47 100.0 30 ............................................... AGTAAGCACTAATATCAGAACCGAAATCAG 29548 47 100.0 30 ............................................... ACAGCATCGCCGCAAAGTCGAAAGCCAGCG 29471 47 100.0 29 ............................................... GAACATGCTCATTATCATAAGTAAGAGTT 29395 47 100.0 30 ............................................... TTGTACTTATTATTATTGAGGCAGAAGCAT 29318 47 100.0 29 ............................................... GTTTGAGAAAGATTATCCTGATTTGTATA 29242 47 100.0 30 ............................................... GGTTGCAGGGGGCAGTAACTCATTCCAGTA 29165 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 23 47 99.9 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : CCTCCTTATATAAAGGAGAGCAGAGAGGATTCTATCAAAAGGGTAAAACGATATAAAGAAGAACTTAGAAGAGATTCTATATTCTTTGCTAAAGTAGATTCAATTAAATTACTAAGGGATTCACTTAGAAATCAAAGAATCTATACCTATATCTTGAAAACTACTATCACACCAGAAAACGTAATAGTTACTGCAAGGAAATCTGGTTATCAACAAGTAACTTTAGATACTCATTATACCAAGCCACAATTATATTACTTGGTATTTACTTCTACCAAACAAATGTCAATAGAAGAGGCATCTGCTTATGCCGATAGGAATCCTGATAAAGTTACTAAGCTATCACAACAACAGTATGATCAGAGATTTGGTAATCAATCATCAGAATATGATTTCTATCTTGATAACCTAGGTTCTTATTATGATGACCCAGAAAACCTAGATGAGAACCCAGATGAAATTTTTGATTTCTTACTCGACTAGGGATTCTCAGCTAATAT # Right flank : GGAATATATGTTACAAACTAATTACCAATTAGTTACACATATATTCAGGAATTAAAAACAAAGTTGTTATCTAATAAGAAATCCCGTCTGAAACGGGATTTCTTATTTTTAAAATAATTCCAATTGCTGTCCTGGAGTAGTTACACCTTGTAGTTTCTTTCCATAAAAAAGTTCAATAGCAGCAAATTGTTTATCAGTGATACACATTATTCCCACTTGTCCATATTCAGGCAAAAAAGATTTAACTCTATTTATATGAACAGTCGCATTCTCGCTACTAGCACAATGACGGACGTAAATTGAAAACTGAAACATTGTAAAGCCATCCTTTTGTAGATTTTTTCTAAAATCAGTATAAGCTTTCTTGTCCTTCTTAGTTTCCGTTGGCAAATCAAATAATACTAGTACCCACATAATCCGATATTCACTAAAACGGTCCATTATCGTTCGGGATAACTAATACGACGAATTTCTCCACAAAAACATTTATATAGAGAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //