Array 1 1131-2358 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000117.1 Cylindrospermopsis raciborskii MVCC19 NODE_4561_length_2413_cov_0.239412_ID_995969, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================== ================== 1131 36 100.0 35 .................................... GGGAAACAATAAAGTTGCCCCTGGGGTCGGGCCGA 1202 36 100.0 36 .................................... GAGAATATTTATCCACAGAGGTGACCCCGCTCAGTG 1274 36 100.0 37 .................................... TACGGCCGTTGCGACGGCTCGCCCTGTGGGAAGAAAA 1347 36 100.0 35 .................................... TCGCACACCTTAGGTTACCTAAGGGAGTTATTTCC 1418 36 100.0 36 .................................... GTTGTGGTTGTTATGGTTGGCTAACTACTCCTCATT 1490 36 100.0 34 .................................... TACTTTTTAAGATATCCGATTACAAAAATATTGT 1560 36 100.0 40 .................................... CATTAAAGAATCAATACGTCAATTTGATAATGAATTTACG 1636 36 100.0 38 .................................... TGCTGCAAGAAGAACTCAAAATAACAAGAGAGTTGCTA 1710 36 100.0 38 .................................... AAAAACTTCTCGACCTCGACGAATTAGGATTTATGAAA 1784 36 100.0 38 .................................... GAGAGAATGTGGGCTTTTGTGGGTTTCAGAGATAATAC 1858 36 100.0 37 .................................... GATACGTCTACGTATCGAAAAAAGATGTTCAACGGTT 1931 36 100.0 44 .................................... ATTAGCTTAGAAGCCCGCGAGTGCTTTCAACAGCCGCTCGGCAA 2011 36 100.0 35 .................................... CTGAGATTAGCTCAATTCCTGTTAATGAATCTTTG 2082 36 100.0 51 .................................... CCTTTCTCGTCTGTAGATTCTATCTTGCTAGCATCTGGTTGAAGGTTAAAA 2169 36 100.0 46 .................................... TGGGAAAATAGCTTTATCAAAGCATTCTAAGTTCAGAATGCGAATA 2251 36 100.0 36 .................................... CTTCATCCACCCACACGCAATAATCATCCGCTTGTA 2323 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================================== ================== 17 36 100.0 39 GTTTCCATTCAATTAATGTCCCCAGCGAGTGGGAAC # Left flank : GCACTTACACTCTACTTAGCTTTTTGGGCAATGAACTCTGAAAAGATAGGGATTATTTACCGCCCTAACGCTTACCGTAGAACTTCCAAAGCCTCCTCCTCGGTTTCAAAGATTTTAAATATTGTGTCCATCAATAGTTCTTCAAATACAGATTTGATTTTTGGCGGCATCTCGCAGAGGCGGAAACTGCCGCCCTCTTTGTCAGCATCCCTCATACCAGCCACCAAAGCTGTTAGACCACTCTCATCAATAAAATTTACCTCCCTGAGATTCACAACGATATGCTTAGATAGTTTGCTAATACACTCCTGTAGTTTCAGCCTCAATTGCCAATTAGTGTCTCTATTTAGAGGACCTGCTGGTGTTACAACAATCACCACAAGGCCGTGTCCACTGAAGTCGCCTAAGCGATGGCTTTTTATCTCTATCTGTAACTGACTCATTGTTGCTTCTTTTTCTACCATTTGTAAAGTTGACGTTCACTGGTTGAGCGTAACAGT # Right flank : CCCTCCATTTTAACCCCTTACCCTGTCTACTGTCTAGACCCACTTTCCGAAGGTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATGTCCCCAGCGAGTGGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 7774-9416 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000112.1 Cylindrospermopsis raciborskii MVCC19 NODE_406_length_30847_cov_0.210615_ID_984321, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================== ================== 7774 37 100.0 38 ..................................... TTAATTCAATAACAGGAGCTGGTGTTGACAACATTGGG 7849 37 100.0 39 ..................................... TGGTGAATTTGCTATATTTATATTATAGTACAAATGTTT 7925 37 100.0 39 ..................................... TTGCTGGCAACAAATATGGCTTAGTAGTTAACAGTACTG 8001 37 100.0 35 ..................................... GATAACAACCCGAAAGCATTGTCCTGTGGTAATTG 8073 37 100.0 36 ..................................... CGATTGTTTCAGAAACAGGTACACGATTAATTACTC 8146 37 100.0 37 ..................................... AAATATGAATTACCCATTTGTCAATACCGAATTTAAC 8220 37 100.0 43 ..................................... TACCGCAAGGGGAGGAAATGCCAAGAATTTTTGTGTCCCATTT 8300 37 100.0 56 ..................................... TGGTAACCAGACTCAACTTGACCACTAGCTCGTTAATGAGCTAGACTCACAAAAAC 8393 37 100.0 44 ..................................... GCTATGGCTTCAGGTTTATCAAAACAAGGTGAGATAGAATATTT 8474 37 100.0 42 ..................................... GAGTTTCTGAGTACATATGCATCAGCCCGCGCGTTTGTTCAT 8553 37 100.0 42 ..................................... TTTTGATCAGTACTATCCAAGACAGTTGCGACATTTGGGAGA 8632 37 100.0 41 ..................................... TCAAGTTCAATCGCTAAACCACTAGCGAGGTCGTTACGTAT 8710 37 100.0 34 ..................................... TAAAGACTAGTTGATTGATTGCACGTCCAATTGA 8781 37 100.0 37 ..................................... TTGATTCACAAACGAGTTCCTGTCCGGTTATGGCCGC 8855 37 100.0 38 ..................................... GGGAATTGAATGGACACAGAATAGAATCTAAATGCATT 8930 37 100.0 35 ..................................... GAGAACGGAGAGAAGTGCGATCGCCTGCGGAGTTC 9002 37 100.0 38 ..................................... TATGCCACAAACTTCATTGTGAGTGCTTGGATAAACTA 9077 37 100.0 41 ..................................... CAAAAGACAGACCAACTCTCTTAGAATTAATCACAAATTCC 9155 37 100.0 38 ..................................... TGTAGTTTTCCCACATTTTATATTTGCACAACTCAATG 9230 37 100.0 37 ..................................... CTGTTAGTTTTGCTTCTAAATCTTGATCGAACTGAAT 9304 37 100.0 38 ..................................... TGTAGTTTTCCCACATTTTATATTTACACAATCCAATG 9379 37 83.8 0 ....................A.....A.AT...TT.. | T [9414] ========== ====== ====== ====== ===================================== ======================================================== ================== 22 37 99.3 39 GTTCCAATTTCTCTTTATCTCCATAGGAGATTGAAAC # Left flank : AGTAAACCTCAACTTTTTGACTTAATTGCTTCCGCTTTACCCACTCGTTTATTAGAGAATGCAACTTATTTAGTTTCTACTACTCTTTTGGAGATTAGATTTGCTGATGAGGAGGTTGTTTATCTACCTAGTCAGATGAATTATTTAATTACCTAAGTGACTTGATCGCGCCTTTGCGAATTTGTTTATGGATTGGTCAGCAATCCTCGTCCTTTTAGATGTGGGGAGTATCAATGTATAAAGGGTATTTTGCGAGGTGATGAAGTTATGGGATTCATCCTTTCAGCTAATTAGGTTTGAAATTGTTGATCTGATTGGCTTTTTGGGTTTCTGTTCCTGCTTTTTTACCTCGCAATTTCTGAACTGCTTGTTGGATAAGGATTTGGGAGATTGTCAGCTCTATGATTCTTTTGCTGTTTAGTGATATACTAGTTGTTGGATCGGTTTGCCTCGCAAGGCTATGCTTTGTGCCAGTCACTGCAAGGTCTTCAGCGATCGCA # Right flank : CGAACGAGAATTTTATGGTGGTTTCCTCAAGAGTGATTCCCGGTCTATGGTAGGATTGAAAAGTATGAAAAACAAAAAGTAAAAAAATGAAACTAAAAATTAAGCCCGTATACTACCGAACTGATATAAAAACTCCAGTTCCTTTCCCGGGTCTGGCAAAGAACATATTACCATATCAACATCAAGTACAAACATATTGTGCTGTATCCAGAAATCAAGATTATGATAGAGCATCAAAGTGGTGTAGGGAATGTGAACTAGTAAACAAATGTAATGTTGCTCATTTTAATCCTTCATCTATCCATAATAGCCTTTGTATTATAAACTCAGCGATAACAGGTGGTGGAAAAACATTGGCAAGTTATGCCCATGCCATAGAACATTGTTTGAATACATCCACAGTAAACAAAGTTTTAGGAGTTTATCCGACGAATGAACTACTTCACGATCAAAAAAGAGCAATTACTAAGCTATTTACACAAATTCATGGTAGGCAACCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTTCTCTTTATCTCCATAGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 25187-22767 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000118.1 Cylindrospermopsis raciborskii MVCC19 NODE_457_length_25239_cov_0.256802_ID_983821, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================================== ================== 25186 36 100.0 34 .................................... TTTCGCGCCATCCTTTGGCGCTTTTGGCGCTTCA 25116 36 100.0 34 .................................... AGAACATATACTAGCTGTGCTAGATGTGTTTCAG 25046 36 100.0 44 .................................... GTTAAGCACGACATAGCCGTTTTTGGCTATTTCGCTTTTAATTG 24966 36 100.0 39 .................................... ATTAAATCTGTATTTGTAAAATTGCGATCTCTTAAATCA 24891 36 100.0 37 .................................... ATTAAATAATCAAACAATAACAGGGTTAGCAAACCCA 24818 36 100.0 36 .................................... ATATTTGCTCACAAGTTGAGCCATTACTTGTAACTC 24746 36 100.0 39 .................................... GCCATCCATGGGTCAGCCGGGTAACTTGACATTTCTGTC 24671 36 100.0 36 .................................... ACGATCACGCCTCTAGATGTATCAGATAAGTTGACA 24599 36 100.0 37 .................................... ATTAAGTTTGTTATTAAACGCTATACCGTTCACAGGG 24526 36 100.0 41 .................................... TCATGTAGGCCGTAGCCACCACGGGCTACCAAACCTTTCGC 24449 36 100.0 38 .................................... CATTAGCTGATCCTGTCGTTTGGTCTTTTACTAATACA 24375 36 100.0 36 .................................... CAACGAGCACCATGTGGCTGTAGTAGGTTTTAGCTT 24303 36 100.0 35 .................................... TCGCCAGGGGCAGATTGTGCTGAATACTTAAAGGT 24232 36 100.0 34 .................................... GAAATTTTAGGGAGGGTTTGAACATGTATAGCTT 24162 36 100.0 34 .................................... TTTTTACACTTAATTTTTGGAAAATATTTTACAC 24092 36 100.0 43 .................................... GGCATTAATCCATTAAAAAGTGTGGCATTAATTTTATTATTTT 24013 36 100.0 37 .................................... CTACGACTGCTTTTACATGTTTAGGGTCCCATGCATA 23940 36 100.0 50 .................................... GAAACTTGTTGGTTTGTCATTAGAAACCTTCTTAAAGGTATCTTTATAAC 23854 36 100.0 35 .................................... GGCTCAGCAACAACAGCTTCAGCGACAGCTTTAAC 23783 36 100.0 39 .................................... TTTAAGCTTGTGATAGGGAAAGTATGTATTTGTATAGTC 23708 36 100.0 38 .................................... ATATTTTTTATTTCTAAGCTTAAATTGTTGAAACTATT 23634 36 100.0 39 .................................... TGCTTAGGTCAGCATAGCTAAGATCAGCACAGCGCAAAC 23559 36 100.0 39 .................................... TCTAAATTTGCATCCTGTACATATGCAGCAGTCAAGTTT 23484 36 100.0 34 .................................... TATTGTACTTTGCTTAGTCGAACAGCGCTTAGTC 23414 36 100.0 37 .................................... AAATCAGCGCCGCGCAAGTCGGCACGTGTTAGATCAG 23341 36 100.0 43 .................................... GGCCTAGAATACCATGGTAGGTATTCTATTTCCATATTTAACC 23262 36 100.0 38 .................................... TACAATTATGTACTTATCATCTGACCATGACCATTCAG 23188 36 100.0 53 .................................... GCGTTTGGCATCCAGCATTTGCTGTCCACAGGTTGACAGAACCTCATCGTCAG 23099 36 100.0 42 .................................... TACTCATTACGGTTATCTTCTGGGTCACACGTAAAGACCGTG 23021 36 100.0 39 .................................... AAATTTTTCCAGTCATCTTTGCTCTTTCCAACAGTTGAA 22946 36 100.0 37 .................................... TAATAACACTCTCGATAAGGGTATCTACATTCATATC 22873 36 100.0 35 .................................... ACCTAACATAAGAGTCACAAGTATTACATTTTTCC 22802 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================================== ================== 33 36 100.0 39 GTCCGCTTTCATCTAGGAAGTGGAATTAATGGAAAC # Left flank : TAATGGAAACTTCTCTGTCCTCTTTTTAGAACGCAGTCTTCCTGACTCCGAC # Right flank : TCAAAAGCTATCCATTTTGATGATCACTTAATGTTGGTCGTTGCAGGGCTATGGAACTTCTATTTGGATGCAGCATAAATTCAATCAGGATGGGGGAACTTCTATCGTCCAAAAAATATGCTTTTATTTCCCAACAGCTCTAGTATATGTTCTTGCCCACAAAATCCAAATCTTCACTAAAGAGTTTTCGACATTTTTCACATTTAAACGGAATTCGGTCGAGTGCCATGCTCTGAGCATCAGCGCCCCCTTGAGAATGAACCTGTCAGCATGAGGAGATTGCGACATTCGGTACAGGAAGCGTTCCATCGCATAGTACTGAAGTAGCTCGCTAAATGGCCGCTGTTCATCTTTCGCCCTGTTTAGAAGACGTTGACGGACAGAAGCAGAGATATTTTTGAGGTTTTTCGCACTCATACCAGTACCTCTAGGTAGGGTTTCATCGCTGCCTCAACCCGGCAGATTCTGGCATATTCAATAAGCTGCCGGGGGTTGAATTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTTTCATCTAGGAAGTGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 2576-63 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000125.1 Cylindrospermopsis raciborskii MVCC19 NODE_537_length_19269_cov_0.277517_ID_984781, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================== ================== 2575 36 100.0 38 .................................... GATGTACAAAAAAAGTATCAACCAGTCGAGGTTGAGAA 2501 36 100.0 33 .................................... TCATTTACAATGATGTACCACATCTCATTGTAA 2432 36 100.0 40 .................................... TGTCTTATATCTGCGTCTGTGACGCAGAACAGTTTCGGGC 2356 36 100.0 38 .................................... TTGAAAGAAACTTTAGGGAATATCTCTACTGGCTGGAA 2282 36 100.0 41 .................................... TTTGCGTGGAGGAAAATAGGGATCACATTCCGTTATCAGGG 2205 36 100.0 37 .................................... TTGAAAACAAACTTTTACAAGACTGTGTAAGTAGTTT 2132 36 100.0 38 .................................... ATGGAAGCTGAGTCAAAAATAGCGACTTCTCCAACTGT 2058 36 100.0 37 .................................... TTCTAAAACCCCTTGACATATTATGGAAAGTAGTTTA 1985 36 100.0 34 .................................... TGACGTAAGCGCGTACCAGGGATGTTTTTTCGAA 1915 36 100.0 42 .................................... ATTTAAAAGGTGCCAGTTTAATTGGTGCCAATTTAATTGATG 1837 36 100.0 42 .................................... AACTTTGTTTGTCTTATCGGACAAACAAAGTACCCTTAAATA 1759 36 100.0 35 .................................... CTATCTGTCCAATGGGTTACTATTTTTCTACATAC 1688 36 100.0 50 .................................... GTCCTTGCCTGCGGTTAGCAGCTTGGCGATGTTAGCCGCAAGGTTCTCTC 1602 36 100.0 36 .................................... TTAATGTTAACTTGATTGATGCTAATTTAGATTTTA 1530 36 100.0 44 .................................... TAGAAATAGTGTGTGTATTGCAGTAAAACTCACGGGAATAGAAA 1450 36 100.0 35 .................................... TATTGAATGGAACGGGACACAGTTTACGTATATCA 1379 36 100.0 39 .................................... CTTTACTAAGGTATCAACCGACTAAAGATTTAATCGAAA 1304 36 100.0 33 .................................... TACTAAAATGATCGACTTTAACCTAGACTTTAA 1235 36 100.0 41 .................................... CTGGTATGCACCCATGCCCGAGGCTCGGGCTCGACTTGGGT 1158 36 100.0 40 .................................... GTCAGGCTCCTGTAGGCCCACAGCTAGAGTACTCATTTAG 1082 36 100.0 36 .................................... GCAATAGACGATAGCGATAGTGTTATGAAATTTTCC 1010 36 100.0 34 .................................... AGAAAAATAATAGTTGTAAAATTAGTTGGTTGCG 940 36 100.0 34 .................................... TTTGCAGACTTAAGAGGTGCAGATCTCAAATCAG 870 36 100.0 44 .................................... ACCCCAGGAGGGGATTTTATGGATTATATTTTCTACCTGACCAA 790 36 100.0 38 .................................... ATGAAAGCAGTTTTAAACAGAGATTTAGAAAGTCTCCC 716 36 100.0 45 .................................... TATAAAGAGATATTTATTTTTCAGGTTAATCCTATCTTATATAAG 635 36 100.0 40 .................................... TGCCGATTTATCAAATGCTAACCTACAATATGCCAAGTTA 559 36 100.0 39 .................................... AAAGTTAAAAAAGTTGCCTCTGAAGCTAAGATATTAGCA 484 36 100.0 45 .................................... TGCACCGAATACTCTAAGGGTGACTATCACCCAACTAGATGACGA 403 36 100.0 47 .................................... TAGAAAGATCGGCTCAAGTATTTCTTATACCAATTACAGTAATAAGA 320 36 100.0 38 .................................... CTGAAGCAGGGCAAGGGACCCAGAAAATCAAACAAAAG 246 36 100.0 37 .................................... CAAAAATGAACGATATTCTAGATCTAAGAGAGCACAA 173 36 100.0 39 .................................... ATGCCGTTATCTAAAGATGCTTGACCCTTAAAATACCAA 98 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================================== ================== 34 36 100.0 39 GTTTCCATTCAATTAATGTCCCCAGCGAGTGGGAAC # Left flank : GTTACAAAAAAACCCCACCCAAGGGGGTGGGGAAAGGGTTAATCTTTTTTAGACTTACCCTTAGCTAATGCCTCCCGGAATGCTCGCATATGGTCATCATATGCGTTCATTTTTGCTATTTCTTTAGCGGCGGCTGCCTTACCGCTCGCTATTTGATCAGCAAATTCTTTGTCTAGTTGTTTGTCCATCTCTTGGTTTGCTCTTTCGATCTCATCAGCTTGGACGCGGAGGATTTCCAAGTATTTTGCTTTTTCTTTGTACTCATCTCCTTCAAGAGCTTCTTCTAGAAGGTTTCCATTAATTCCACTTCCTAGAAGAAAACGGACCGTTTGCTGAGTTGATAATGTCTCGGTTGGTGGGGTGGGAAGTGTTGGTTCCTGTTTCCCTTCTACCGTTTCCGGTGTTGTTATCTCGGTTGCTCTGGTAGTAAGCCCGAGTTTTATCATTCTCCTGTTGAACTCTGCATTAAAATTTATCATGTTAATCCACCGCATAAATTT # Right flank : CACTAAGGAAAACCACGTGATATTGTTTAAGCGGAGTTTCCATTCAATTAATGTCCCCAGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATGTCCCCAGCGAGTGGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 124-1757 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000013.1 Cylindrospermopsis raciborskii MVCC19 NODE_1291_length_7045_cov_0.240282_ID_988195, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================================================================ ================== 124 36 100.0 35 .................................... AAAAGACTGCAGTTTACCAAACACCAGAGCTTGTT 195 36 100.0 38 .................................... CCCTTTCGACCTGGGCATCAAAAGCCTTTACCATTTCG 269 36 100.0 38 .................................... CCGACGAATCGGTACGTGCTGACCGCACGCATTACATA 343 36 100.0 42 .................................... CCATCGGCAAAGTACGATGAACAATTAGAGTCCTGCTCTCTG 421 36 100.0 43 .................................... ATATGGTCAATAACCTCTTGGGTGATATGAAAAGAAAAGGTTT 500 36 100.0 40 .................................... AGCGCGGCTACCTATAGTTATATAGGCATTATCTCCGTTT 576 36 100.0 38 .................................... CTCTCTATAGCAGCCTTTAGCACAATGAATTTAACCAT 650 36 100.0 45 .................................... CTCATGGGCCAGTGTGTCACACCAATTAGAGCTGCCAGAGTTCCA 731 36 100.0 36 .................................... TTTTCAATAGAGCTTTAAATAAAATTCTCAAAGAAA 803 36 100.0 36 .................................... CAACCGCCAACTGAGAATAATAATTGGTTGACGATT 875 36 100.0 39 .................................... TTATTCATTACGATAAGCACGACTACTAACTAACTCCCC 950 36 100.0 39 .................................... GGCCAAAGCCTCAGCGTCGGGGTGGTTATAGAAGTGAAC 1025 36 100.0 54 .................................... TTCTGCTGGTAAGATACGGAAAGGCACCTATAACAGCATGACATCTTGGATCTT 1115 36 100.0 35 .................................... ATAACGCTGGTTGCTTTACGGAAAATTTCATAACA 1186 36 100.0 36 .................................... TTGCAGAAGGATGAAGCTTTTTAGGCTTCTCTTCTG 1258 36 100.0 46 .................................... TCTTCTCTGGGGGTGTTATCCCTGAAACTCTTGTAGAGCTAGAAAA 1340 36 100.0 38 .................................... TTAACACAATATTAACGGACAGCACATTAACTGGTGCT 1414 36 100.0 36 .................................... ACAAATAAAGGCCTTAGAAAGGCCCGCTGAGTGGCA 1486 36 100.0 40 .................................... CTTTTGCAGATCAACAATAATAGATATGATTTTTTCTGGG 1562 36 100.0 124 .................................... ATTTGTACGCCACAAATATTTATTTTTCTTCTGTAGAGATGGATTTCGAGATCTATAATTGAAACCAGCCAGCAGAATCACGAGGTTAGCTTGTAGTGGACTGTTTCAGCTAAAATGAGGCAAT 1722 36 91.7 0 ..............................CA...A | ========== ====== ====== ====== ==================================== ============================================================================================================================ ================== 21 36 99.6 44 GTTCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : CCTTGTCCCATAAGGATTTGAGGTATGTTTTAAGAGTGTATAAGAGGCTGGAATGGGATTTTTTTTCTGACCTTCGGAAAGTGGGTCTAGACAGTAGACAGGGTAAGGGATTAAAATGGAGGGG # Right flank : ACCTTCCCCAAGGTTTTTAAAAACCTGAAAAATCTAAGGATGATAAACATGCGATCTCACATGGTGAGTGCTTCGCAAACGCGCTGGGAGTGCTTCGCAAATGCACTGGAGTAACTGCCATGCGATCGCAACCGATGTCCCAAAACCACAAGTACAAAACTGACTTTTGTTCTGGAGGTTTTAAGTAAATACTCCCATAATAAGGTTTAAGCTCTTTGGATCCCCCCAACCCCCTTAAAAAGAGGGCTAATTGTTTTGTGTTTAGTTTATGAGAAATTATGGCTGCTTATATTATAATGGATGGGGTGAGTGCTGGGGATTTTATGAAGGGGGTAAAGGGCGATCTCGCAAGTGCGAGTGCTTCGCAAACGCCCGTAGCGAGTACTTTGCAAATGCACTGGATATTCGGTTACCTCCCCTTTCTCAAGGGAAATTTGTGAACATGGTTAGGAGCGATCGCACTTAGTAATTCCTGTCCTTCTGTTCTCAAGGGAAATTTA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.42, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 2616-6575 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000013.1 Cylindrospermopsis raciborskii MVCC19 NODE_1291_length_7045_cov_0.240282_ID_988195, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================== ================== 2616 36 100.0 37 .................................... GCGAGTAAATACCAGTGGTAGGGTAAGTACAGAATTT 2689 36 100.0 36 .................................... TTCCCTCCAATATTTTTTGTACTCTTCATACGATAA 2761 36 100.0 36 .................................... ATCGATATAAACCACCTCCTTGGATGGAGCGACAAA 2833 36 100.0 33 .................................... CTCAAGGCTGCCGGTTTAACCTCACCAGTGGGC 2902 36 100.0 51 .................................... GGGGGGGATAGGGGGAGGGGTGGTATTGGCGGCTGTACGGGGGTTAAAAAG 2989 36 100.0 38 .................................... GCAATATTGCTTCAGACTCAATCAACCTAGAATTACTT 3063 36 100.0 36 .................................... GATAATGTTGCTATTGACAAAGAATTCAAAGGTGGT 3135 36 100.0 35 .................................... TAAAATATTGCATCCGACTAAGCAGATGCAGTCTA 3206 36 100.0 52 .................................... AGAAAACGGTAATAGAGAGGAGAAAGAGACCGAGCCAGATAAAGAGGAAAGA 3294 36 100.0 37 .................................... CCATTGAACGTAATGCGGGATGGCCGCCTGTATGTTC 3367 36 100.0 38 .................................... TATAAGTTCTGTCAGTTCTTGTTGCATTTTGGTTAAAA 3441 36 100.0 36 .................................... ATATAGTTTCTCTGCAGTAATCCAGACAATAGTAAT 3513 36 100.0 41 .................................... GGTAAAGATGTAAGTTACATTTTATTAGCATATACTCAAAT 3590 36 100.0 42 .................................... GATTGGTACATACAACTACTCGACTCCTGTGGAGTTGAGTTC 3668 36 100.0 38 .................................... GGATTGTCCACTGTAGTAGATGTAATAACTGTAAAGCC 3742 36 100.0 38 .................................... ATTTATTAGATCAGCATTGGAAAGTTTAGCACTATCCA 3816 36 100.0 36 .................................... GTAAGTGGAAATTGAGTTGACAGAAGCAGTGACAGA 3888 36 100.0 37 .................................... GACATAAGTTACTAAAGAGTATTGTTTTATTTCTACC 3961 36 100.0 46 .................................... AAGGAAATCACAATACCTTGAATCATATCTTGTATATGATCGGGTA 4043 36 100.0 41 .................................... TTGTTCTAAAACATCAGCAGATAAAAATGCTTGAATTTGAA 4120 36 100.0 35 .................................... AGAGATATTCAAATACCTCAATGGCTACAGAAAAG 4191 36 100.0 40 .................................... ACGCCAGAGAAACATTGGGCAGTATTTGGAGAAAGTCATC 4267 36 100.0 49 .................................... TACTTATTTGTTCTTTTAGTATCGCTCTGTGATAATATGCTCTAGCACA 4352 36 100.0 36 .................................... TTTGGACCAAGTTCGCGTGTTATTTCTCCTAATTTA 4424 36 100.0 38 .................................... CTACTACCATTATCTCCACTTTCTTACTAAAGATTCTA 4498 36 100.0 41 .................................... AGTCACGGGACTGGGTTGGGAGTTAGTTAGTCATCGTGCTT 4575 36 100.0 42 .................................... ACAAAAGTTATAGTTTCAAAGGCTTGCTCGTTATTATTAAGG 4653 36 100.0 47 .................................... GTTTTGGGTCCGTCAAATATATTACTGTTTTTTGATCCTTCTTAGAA 4736 36 100.0 40 .................................... AAGACTAGGAGAACAACAATGGGAAGATTGATATCTAATT 4812 36 100.0 35 .................................... ACTGTTGTGGCCTTTCTAATGCCTTCATTTTTGTT 4883 36 100.0 40 .................................... TTATCAAATCTGTTTGGTTAGAACTCACTTGAGAGTCCAA 4959 36 100.0 37 .................................... CCAAAACCAACTCTGGAAAAGTGGAGTAAAGATGGCA 5032 36 100.0 41 .................................... ACAAATTGGCATTTGTCAAATCAACACCTAACAATTTTGCA 5109 36 100.0 31 .................................... GTATTTTTTTGGCATAACCGCTTAGTCGGAT 5176 36 100.0 43 .................................... ATTCAATCTGAGGAAAACTCTCTTAAAGACTATCTTGACTCTA 5255 36 100.0 43 .................................... ATCCTGGCGACGGTGAAAGTCTCAACCCCGGCAACACCAGCAG 5334 36 100.0 37 .................................... ACCAAAAACCCAGAACTTGTAATTGTTGAGTATCCTG 5407 36 100.0 41 .................................... TTTTTAATATAGTGGAGCCTTCTCTTTTCTTCCGTTACCAT 5484 36 100.0 39 .................................... ATATAAGCGTTACTCAAGTTGACATTGTTTAAATTTGAA 5559 36 100.0 34 .................................... TTGTTCCAATCTGATAGCGAGGCAAAGTTTTTCT 5629 36 100.0 38 .................................... TGGTTTTCCCCAAGATGTTGTCGCTTCTTTTTTGTCGA 5703 36 100.0 36 .................................... CAAGAAAAAGGTTGAGAGCCGGAAAGTATTGGTAGT 5775 36 100.0 39 .................................... TTTTAAATTACCTCAAGATATTCGAATAATTTTGTTACT 5850 36 100.0 34 .................................... GAAAGATAAGCGTCTTGAATCACTTGTGGCACCA 5920 36 100.0 38 .................................... CCCGCAGATCGGCACCGCGCAAGTCAGCAAAGCTTAAA 5994 36 100.0 39 .................................... ACGTTAAGTCGGCATTGCGCAGGTCGGCGCATATCAGAG 6069 36 100.0 40 .................................... GAAAACAACCTCTACATCCAAGTCGTACCCTTTGGAGTCA 6145 36 100.0 41 .................................... GTCCTGGCAACTCCACACCTTACTAAATGAATTCGAGCACT 6222 36 100.0 39 .................................... CCTCTCTACTGACGGTTTCTCCGTCATGGACCAGCCCCA 6297 36 100.0 41 .................................... CTTCCCAGGAGGGAATAACTGCTCAAGAAATTCGCGGGTGT 6374 36 100.0 58 .................................... CTTCAAGTGTCCTGTTGTCCAACTGAAGCAACCCTATGCCTTGACCACGTGAGTAGTC 6468 36 100.0 36 .................................... TTGGTAGCGAACGATGTAAGTTTTCATAGTTTATTT 6540 36 83.3 0 ....A.....A.T.................CA...T | ========== ====== ====== ====== ==================================== ========================================================== ================== 53 36 99.7 39 GTCCGCTTTCTTCTAGGAAGTGGAATTAATGGAAAC # Left flank : GCTTCGCAAACGCCCGTAGCGAGTACTTTGCAAATGCACTGGATATTCGGTTACCTCCCCTTTCTCAAGGGAAATTTGTGAACATGGTTAGGAGCGATCGCACTTAGTAATTCCTGTCCTTCTGTTCTCAAGGGAAATTTATAAACATGGTAAATGTGCGATCGCGTGTAGCGAGTACTTCCTTAATGTGCTGGATATTCCCTTACCTCTCCGTTCTCAAGGGAAATTTGTGAACATGGTTAGGAGCGATCGCGTGTAGCGAGTACTTTACAAACAAACGTAGGGAGTGATTCACAAACAGACCAAAAATCGTGCCTGTTTTTTTTATCACCTTTATAATTTATTATTGGAAAAATGGAGAGAGTGTAGTTATAACAAGATATTTGGGATAAAATATTGAAAATTCTTATAATTATATAAGAGGCTGGAATGGGATTTTTTTTCTGACCTTCGGAAAGTGGGTCTAGACAGTAAACAGGGTAAGGGTTTAAAATGAAAGG # Right flank : CCTTGATCAAGGTTTTTAAAAACCTGGAAAAATTAAGGATGATAAACATGCGATCTCCCATAGCGAGTGCTTTGGAACCGCGCTGGATTAACTGCCATGCGATCGCAACCGATGTCCCAAAACCACAAGTACAAAACTGACTTTTTTTCTGGAGGTTTTAAGTAAATACATCCATAATAAGGTTTAAGCTCTTTGAATCCCCTCAACCCCTTTTTAAAAGGGGAGGTAAATGCTTTGTGTTTAGTTTATGAGGAGTTAAAGCTGCTTATATTATAATGGATGAGGTAAGTGCTAGGGAAATTATGAAGAGGGTAAAGGGCGATCGCGCTGGGAGTACTTCGTAAACGAACTCAGCATCCCCTTACCTCTCCGTTCTCAAGGGAAATTTATCAAGGTCATTAGGTGCGATCGCCCTGGGAGTACTTCGTAAATCCTCTGGATATTACCATGACCTCCCCATTCTCAAGGGA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTTTCTTCTAGGAAGTGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 127-1121 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000142.1 Cylindrospermopsis raciborskii MVCC19 NODE_7136_length_1581_cov_0.195007_ID_1003827, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 127 36 100.0 39 .................................... CCATGTACCTCTCTAGAGAGTCTACCCTCCAGGCATGCC 202 36 100.0 36 .................................... CTTATACACAGGGTGGGTCCTTCCCCCGTAACTAAT 274 36 100.0 43 .................................... AAGTTATGTCTTTTAAGCTCATTAGCTGTTTTGTTGATTTGTT 353 36 100.0 41 .................................... CTCTTCGACAGACTGAAAGGTAAAGAGGGGTATGGAAAAAA 430 36 100.0 40 .................................... GAATAATTACTCCATTTATGGAGTCGCCGGGGTCGGCAAC 506 36 100.0 42 .................................... CAGACTTTATGCTGAGAGAATGGTAAGACATGCTGTAGAAGG 584 36 100.0 38 .................................... GTGATCCAATTTTTATTTGATTTAAATCTGAAACAGAA 658 36 100.0 40 .................................... CTATGGCACAGACAGAATCCACACTCCTTTCAAAGAGGAC 734 36 100.0 34 .................................... TTTAATAGTTAAATAGGTTTAGTACGAGGAACTA 804 36 100.0 42 .................................... TCACGTAGTCGTTCTCGCTTACTACAGCGCTGAGCTGTATAA 882 36 100.0 44 .................................... GCTGCCTTCTTTATTAGCTAGTTGAGCGAAGTAGACTTGAGTAA 962 36 100.0 40 .................................... ACTATTGTTTTTTGGTGTTTTAGATTTCCATTAGAGCTGG 1038 36 100.0 13 .................................... CAATCATTAACAT Deletion [1087] 1087 35 75.0 0 C..-...........AA..CCC........C....T | ========== ====== ====== ====== ==================================== ============================================ ================== 14 36 98.2 38 GTTCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : GTCCCTTGTCCCATAAGGATTTGAGGTATGTTTTAAGAGTGTATAAGAGGCTGGAATGGGATTTTTTTTCTGACCTTCGGAAAGTGGTTCTAGACAGTAGACAGGGTAAGGGTTTAAAATGGAGGGG # Right flank : AGGAGAAAAAAAATGACGCAACTAATAGGTATCTCGGGACCACTCTTGACATTGAAGCAGAGGGAAAACATCGGTCCCTACGAAGTTATCATTGACTTCGAAGCAACGAACGACCCAGACACACTGGAGAAATTGAAGGAGTTGGGGATGAGTGGAGGTCGGGGCAGGTACGACATGAGTGACGGTATACTAGAGATAACAATCCCGACAACAAAATACGGTGATATGTTTTTTTATGCCGTCCTCGATGAGGACCGCCGTATTGGTTTTGTATCCTATGGGGTAACTATAGATATGGATACCGGCGGCTCGAAGGTAGATGGTCACCTCACTATTAGCACATCCGATCTCTGTCATGAGGGTGGCTATGGCGATCCCCAAACCATTACCTTTTCTTCTGTAGAGATGGATTTCAAGATCTATAATTGAAACCAGCCAGCAGAATCACGAGGTTAGCTTG # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 28-291 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000062.1 Cylindrospermopsis raciborskii MVCC19 NODE_25708_length_326_cov_0.193833_ID_1038367, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 28 37 100.0 36 ..................................... AAAGTCACTGGACTCCAATATTATTCTGATGTCAAC 101 37 100.0 42 ..................................... TCTCTGTCCTCTTTTTAGAACGCAGTCTTCCTGACTCCGACC 180 37 100.0 38 ..................................... TAATCGGACTAAGTCTGGAGTGCATAAATATATATACT 255 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 4 37 100.0 39 GTCCGCTTTCATCTAGGAAGTGGAATTAATGGAAACT # Left flank : AGTCTGGAGTGCATAAATATATATACTG # Right flank : AAAGTCACTGGACTCCAATATTATTCTGATGTCAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTTTCATCTAGGAAGTGGAATTAATGGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 8099-6170 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000005.1 Cylindrospermopsis raciborskii MVCC19 NODE_1101_length_8161_cov_0.249318_ID_987389, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 8098 36 100.0 36 .................................... CTAAGCGCATAAGATAAAAAAATGCCCGATCAGGAG 8026 36 100.0 35 .................................... TATTAGTGCTAGGTGTTACTTTAACAGCACTTTCT 7955 36 100.0 36 .................................... CTAAGCGCATAAGATAAAAAAATGCCCGATCAGGAG 7883 36 100.0 35 .................................... TATTAGTGCTAGGTGTTACTTTAACAGCACTTTCT 7812 36 100.0 42 .................................... TTTTAATAAAAGTATATCCGCTATATATCTTGGTATAGGTAG 7734 36 100.0 36 .................................... CAAGCAGCTGCTTCTGCCTTTGCGTTTTTCTTTGAA 7662 36 100.0 42 .................................... GTAGAAGCACGATCACCCGAAGAGGTGATAACTCCAGCGCGT 7584 36 100.0 49 .................................... TGAAATTGTTGGTTTTATTATTTTCCCTTCCTCCCAGATATACTCTAAA 7499 36 100.0 34 .................................... GTCAACCAACTCGTTTAGGGTCTTGGAATCAAGT 7429 36 100.0 40 .................................... GCTCCATCTCTTCATTTGATTTCTTAAGAGCTTTTATTTT 7353 36 100.0 34 .................................... GTGATAGCAGCTTTCAGTGATTCCAACTTTTCCA 7283 36 100.0 40 .................................... TAAAATAGAAAGGTTCCCAGTCCCGGAGCCAGTTGTTTAC 7207 36 100.0 42 .................................... GAGCTGTCTCTTTGTCCAAGGAACGTAGCTCTTGGCCGGCGT 7129 36 97.2 41 T................................... TTTGGCGTACCTATGTTCAAAGGATTTTTAGAAGGGTTGAA 7052 36 100.0 36 .................................... TCACCTGTAACAGAAAACTACTATTCTTTGAAAACA 6980 36 100.0 43 .................................... TTGGGACAGCAAGCAGTGCAAGAATAGTAGTAAATGCGGACAA 6901 36 100.0 39 .................................... GTAGTTACTGGAAATCTTATTATTTGCCTACTAAATATT 6826 36 100.0 37 .................................... TTAGTTGAATTATCCATAAGAGTAATTATGTTTTTTA 6753 36 100.0 45 .................................... AAGGTTACATAAAGAGACCTAAAATTAGGCCCTTCCGTTCTGACC 6672 36 100.0 43 .................................... CTAGCCCATATTGTTTTGGTCCGGCAGAAGATTATATAAAGGT 6593 36 100.0 40 .................................... TCTTCAACGGTCTCAATCATAACAGTGATAACGGAGTTAT 6517 36 100.0 38 .................................... CCTGGCAGGCTTCTTCGATCAAAAGAAGAACCTCCTTT 6443 36 100.0 46 .................................... GTCTGCAAACGAAATTTGACCGCCAGCAAACAGGTCGCTTACGCGA 6361 36 100.0 45 .................................... AGGAGAGCGGCACCTATCATACTAAATATGATAGGATTTACAACA 6280 36 100.0 40 .................................... TTTATTTTTACCTCTGTATCTTTTGCTGCAATTTTTACCT 6204 35 91.7 0 .............G.................A.-.. | ========== ====== ====== ====== ==================================== ================================================= ================== 26 36 99.6 40 GTTCTGACCTTCACTAGAAGGTATAGGTATTGCGAC # Left flank : CTTCACTAGAAGGTATAGGTATTGCGACTATTAGTGCTAGGTGTTACTTTAACAGCACTTTC # Right flank : AGATTGACCCAATAGCTTTTAAAAAGGCGTACTTTAGATTTGTTGTAACCTTAACTAGAAAGTGTAAACACTGAATTTACCCCGCTCTAAAATTAATCTTTGAGCGGGGTTTACTTTTGGAAGATCCAATTCCATTCCCAGACGTAGGTTTGCCAACCGCTATTAAACACTACAAAAGCTTTTAAAGTACCGTTTACCAATACCTCAACTGTCTTAATTATTGCCTCTTCCCAAACCCCTTTCATACAGTTCCAAACCACGGCAACCCCTACCATTGGTACTTTTTTCTCTTGCTTAATTCCCAAGTTTTCACTGTCCTGGTCTCGTATTTTGGATTCCTCTGTCCTCTCTCTGTTTTCCAAATGTTGTTGGGAAGACTCACCCGTTATGACTACACCGTTGTTGGGTGGGTCAGTTTTTACTATTTCTCTTTCCGTCCCAAAAGTATTGTCTATATTATATATACCATTTTTGGACGAGACTCTTTCCTCCTGTTTCCA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGACCTTCACTAGAAGGTATAGGTATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 270-11 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000067.1 Cylindrospermopsis raciborskii MVCC19 NODE_27662_length_307_cov_0.105769_ID_1041531, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 269 36 100.0 39 .................................... ATTTTATCTTGCCTGCCTAAGTCTATTCCTGTTATTGAT 194 36 100.0 42 .................................... CTTAAAGCCAGCATTGGAAAGCCATCAAAGGCAGCTGTTTGT 116 36 100.0 34 .................................... TCTACATACTACGCCCTGAAGCCGGGGTGTTTAC 46 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 4 36 100.0 39 GTCGCAATACCTATACCTTCTAGTGAAGGTCAGAAC # Left flank : GAAAAGAGAAGAATGCTGTTCGCAAAGAAAAGCGAAA # Right flank : CCCCTCGATTT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATACCTATACCTTCTAGTGAAGGTCAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 2642-27 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000081.1 Cylindrospermopsis raciborskii MVCC19 NODE_307_length_49082_cov_0.224547_ID_983927, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================== ================== 2641 36 100.0 35 .................................... TTGAAGGTTTTGTTAGAAATAACAAAACGTATCAA 2570 36 100.0 48 .................................... TTGTAACATGTATAAGATCTAACATAACGCCCTCCTCAGGGTTTAAAA 2486 36 100.0 35 .................................... GCGAGACTTGTCTAGGCTAAAGCTCCTAGCAACTC 2415 36 100.0 35 .................................... TGCATATTTGGCTCTTATTGCATTGAACCGAACTT 2344 36 100.0 43 .................................... GAAGGTAAGGAGGCCTGGGCCAACTTCAGGGCTTCGTCCGCGT 2265 36 100.0 43 .................................... GTAACAAACATGGCTTTCATGTTTAAAAGTAATGGTGTTATAG 2186 36 100.0 42 .................................... AAAAAAACCCCACCCAAGGGGGTGAGGTTAAAGAACTAAAAA 2108 36 100.0 36 .................................... CGATGAAGGTAAAATGACCGTCAGCGACTACCATGA 2036 36 100.0 51 .................................... CTCCTCAAGCGAGAAGAATTTCAGATCACCATTAACCTTGAGGTTACTTAA 1949 36 100.0 36 .................................... AGTGTTATTCGACACTTAACGGAGTGTTTGGGAGAA 1877 36 100.0 38 .................................... TATACGAGCTTGTTATAATAATCAGCTACTTTCTTCAT 1803 36 100.0 35 .................................... CAAATCTCCAGTTCATTGCCTTGCTCCTTCTCTCT 1732 36 100.0 50 .................................... ATAATAATCAACTACCTTCATACAACGCCCCTCCCAGGGGTAAATGAGCC 1646 36 100.0 58 .................................... TAACCCAAGAGCTTTATAGAGTACTAGCAGACCAGTTTAAAGACGTAGTCTTTAAGTA 1552 36 100.0 37 .................................... CTTTAGAAAGTCTATTGCTCTTTCTACACTAAATCTA 1479 36 100.0 38 .................................... GCATGAAAGGTAAAGAGGGGTATGGAAACAACTACCAC 1405 36 100.0 40 .................................... TCCTTAAAGTAAATAGTGTCTACTTTTTGTAGATCACCTA 1329 36 100.0 34 .................................... ATCTTTTAATTGCGCTAGAACGTAACTTTTAAAG 1259 36 100.0 38 .................................... GGTATAGAGGTTTATATACCTCAGTCTCACCCTGACGC 1185 36 100.0 36 .................................... TGGCTCCCACTCATACCATAAGATGACTTGGTAGTC 1113 36 100.0 37 .................................... CAAAAAAACCCCACCCAAGGGGGTGAGGTTGTAGAGA 1040 36 100.0 37 .................................... TGGAAAAACTACACCAGTTAAGTTGGTGTTAGTTAAA 967 36 100.0 46 .................................... CTAATCTGACAAACACCAATTTGTCACGTGCAAACTTGACTGCTGC 885 36 100.0 48 .................................... ACGATGTCGTGATATCGCATAAGCGGACGATGTCAAGTCGGACTAAGG 801 36 100.0 45 .................................... ATCTCATTAACGAGAACCAAGAATTTCGATACATGAAATATATAG 720 36 100.0 36 .................................... TTGTGGTATTGGGAGATCGCAATCAATTGCGATCTC 648 36 100.0 40 .................................... AGTAAGATCTGAGTGGGGAATGAATGGGGCGTGGATTGAT 572 36 100.0 37 .................................... ACTTTCTAATCCCCCTAGAGGTTATTGCCTCTATGGG 499 36 100.0 39 .................................... TTTTGAGGAAGTTGATTCTTCTCCCTTTTCTCCTTCCCC 424 36 100.0 33 .................................... CTCCAACTCTGCCTGTCTGGCTTTTACAGCTTC 355 36 100.0 40 .................................... TAGCTTACCGATTAAATCGGTAAGTAAAACCATAATTTTT 279 36 100.0 39 .................................... TCAATAGCTGGCAGTCTCCCAGAAACGCTGGAAGGGCAA 204 36 100.0 36 .................................... TGATTTAATTTTATCGATACGGTCCTTTGCCTTTAG 132 36 100.0 34 .................................... GAAAGAGAAAAATCTTCCTCACGGAGGATAATCT 62 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================================== ================== 35 36 100.0 40 GTCCGCTTTCTTCTAGGAAGTGGAATTAATGGAAAC # Left flank : GTGATTCGTAAACGCGCTGGATATTCCCTTACCTCTCCGTTCTCAAGGGAAGTTTATCAAGGTCATTGGGTGCGATCGCGCGTAGCGAGTGCTTTACAAACGCACGTAGGGAGCGATTCGTAAACGCGCTGGGAGTGATTCACAAACAGACCAAAAATCGTGACTGTGTTTTTTATCACCTTTATAATTTATTATTGGAAAAATGGAGAGAGTATAGTTATAACAAGATATTTGGGATAAAATATTGAAAATTCTTATAATTAATGTAATAATAGGAAGAGAAATAAATATGACAATAATATCAGTGAATAACGAAAAAATTCCGAAGGTCAAGGAAAATGGCTGGAAGGCTAGTAAAATCGTCGGGAACCTCGGTCCCTTGTCCCATAAGGATTTGAGGTATGTTTTAAGAGTGTATAAGAGGCTGGAATGGGATTTTTTTTCTGACCTTCGGAAAGTGGGTCTAGACAGTAAACAGGGTAAGGGTTTAAAATGGAAGG # Right flank : CTTGGTAGCGAACGATGTAAGTTTTCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTTTCTTCTAGGAAGTGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 807-5547 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIRO01000009.1 Cylindrospermopsis raciborskii MVCC19 NODE_1215_length_7450_cov_0.251666_ID_987921, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================================================================================================================================================================= ================== 807 36 100.0 37 .................................... AAATAGTATTTTCATACTTTGCCCCAAAAAAGTTGTT 880 36 100.0 38 .................................... CAGACAGTGCAAGGTACAAATAAGGGACATCCTCCCTG 954 36 100.0 37 .................................... CATAACTATGACTACATCCCTTTCTAATACTTTTACT 1027 36 100.0 36 .................................... GATAAAAACGGGCTATAATGCCCGGGGGATCTATTA 1099 36 100.0 42 .................................... TTTAGAGTGGCGAGAGACCCTTTCCACTGGTGCTGGGGTAAA 1177 36 100.0 39 .................................... ACTTTTTACTGGGGAAAAAAGTACAGTAATTGAGTCCTA 1252 36 100.0 40 .................................... CGGAAAGCCTCCATACGGTCATCATATAGAGAACATTTTG 1328 36 100.0 36 .................................... TACTCTATTCGTCCGTTTTACTTCTTTCTTTTTAAA 1400 36 100.0 39 .................................... ATGACATCCGTCCGTGGCGTGCATACCACTGTCGAAGCA 1475 36 100.0 37 .................................... TTGATACCATCCTCCTTGCCACCATTTTGGCAAAGTT 1548 36 100.0 34 .................................... GCGCTATTAACATCCCTGTTAAAAGCCTATCCAG 1618 36 100.0 36 .................................... CACTTTTTTGGGCAGATACTTGGTTGGTCATTTTCT 1690 36 100.0 38 .................................... GGCCAAAGCCTCAGCGTCGGGGTGGTTATAGAAGTGAA 1764 36 100.0 37 .................................... ACAGTACTTGAGTCCTACAATCCAGTAGACTCTTTTA 1837 36 100.0 41 .................................... TGAACAGCCTCATGGGCTAAGCTGTCCACGTCTTGTTCCCG 1914 36 100.0 37 .................................... TTTATGGAATTTTTTTTCATTTGTTTATTCCATATTT 1987 36 100.0 38 .................................... GTGGTGGTGGTGGTCATGGTCATGGTTTTAGCGGCTTA 2061 36 100.0 38 .................................... AGGGCCAGCTCATGGTATTCGTTGGCGGTCATATGACC 2135 36 100.0 37 .................................... GCAAGTAGTTGGTTCAAAAGTTCGGTTTTGTTCACTG 2208 36 100.0 36 .................................... CAGTCCTTACGGACGTAGAAGGTAGATTTTTGTAAT 2280 36 100.0 38 .................................... TGTACTTTTTTCCATAAAAAAATACAAAAAAAAATGTA 2354 36 100.0 37 .................................... ACTATTAAAACAGTTTCTGATAATGGAATACTTGGAA 2427 36 100.0 36 .................................... CCAATAAGAGTACTATATTTAAGGCTACCATTAGCC 2499 36 100.0 44 .................................... CTGCAATACTCCTTTGTCCCTTCTATCCCTAACCTATCTGGCCA 2579 36 100.0 33 .................................... CACTAACGGATCTCATGCAATGATTTGTATGGT 2648 36 100.0 36 .................................... TAAAATCATCCTTTCATAAGTATTAGAACAGTCTTG 2720 36 100.0 37 .................................... CAAAAAAGAATACATCTCTGGCCAGAAGTATTCTTTG 2793 36 100.0 34 .................................... TCCCCGGGGTCTGCGACCCCCTTGTAGGTTATTG 2863 36 100.0 39 .................................... CTTTTCTTCTGTCTTCATCACTTAGTTTTGCTGTAGAAT 2938 36 100.0 39 .................................... TGGCGCTCATTTCATCTCACTATCAGCTGGAACATTGAT 3013 36 100.0 38 .................................... TTTTATTGTTTGATATACTATATCGTCCTTGTGGACGA 3087 36 100.0 38 .................................... CCCCGGGGAAAACACTTTTAAGATACCCACGGGTGTGC 3161 36 100.0 41 .................................... TAGTTCCCTGTTACTTGGCAATCAACCAAGAGCTCCTCAAC 3238 36 100.0 41 .................................... ACCTTGTTTAAAACCTATGACTGTTTTCTTAGACTCTTCTA 3315 36 100.0 37 .................................... GTCAATTGGTTTGGTTAGGTCCAAGTCCACCCAACCT 3388 36 100.0 37 .................................... TGAAAGTTAAACCTATTTTCCGCAACGCGGCGGAAGA 3461 36 100.0 33 .................................... TCCAATTTGTCTTTTCTTTCCCCACATTTTCTA 3530 36 100.0 37 .................................... AAAAAAAGTTTCTAATAGAAAGGTAAACAACTCATTT 3603 36 100.0 32 .................................... ACTTGTAGTCAAGAAGGACTATCATCTTAGCT 3671 36 100.0 36 .................................... CACCTATAACAATAGGTGAGCTATGGTTAATTTCAC 3743 36 100.0 43 .................................... CAATTATTATTCCGGAAAGGGAGTCGCCGGGGTCGGCTTTACC 3822 36 100.0 39 .................................... CTCTAAGACTTAATAATCAACTCGTTACTGTTACCTCCT 3897 36 100.0 45 .................................... ACTTCTTGTCGTTGAATTTGGAGGTCCAGAAAAGCAACTCTTGCG 3978 36 100.0 47 .................................... TTGAAAATGTGGGTAGAGGGAAAGAATCATGGAAGACGTTCAGAGAG 4061 36 100.0 35 .................................... AGCTTATGCTTAATATTGAAAACTCTGAAGTAGCT 4132 36 100.0 36 .................................... TTTGAAGCCAATGGACACTTTCGTGCGCAAGGCTTT 4204 36 100.0 36 .................................... AATTTTAGACTACAATCGCTTAGTCGAATGTATGTA 4276 36 100.0 38 .................................... GCGCTTAGTCGGACAAGGCTTGGATTGAGTGCATATAT 4350 36 100.0 38 .................................... CAGGGTAAAAGTAGTTCCCTGCCTCCTTTTCATTAATA 4424 36 100.0 38 .................................... CCAAAATGGAATTTATGCCTATTAGCAAAGTATGGCTC 4498 36 100.0 37 .................................... ATGCCCTCACTGTACTTCTATTGACATCCGCCTCGCT 4571 36 100.0 45 .................................... GTGCGAGGGGCACCCGAAAAATAATTGCTTGAAAAAAAATATCTA 4652 36 100.0 42 .................................... GTTGTATTTAGCTGTTTGGGACTTGTCATACTTATAGAGTTC 4730 36 100.0 37 .................................... AACACAACATTACATTGTGATATCCTCCTTGAGGTAG 4803 36 100.0 35 .................................... AGTCCGACTAAGCAGTTATGATACAAAAATGCCCA 4874 36 100.0 41 .................................... TATTATAATGGTCAATCAGGATCACCTAAAGTAAACAACAG 4951 36 100.0 39 .................................... GATATCCCCTATTTTTTAGGACATCTCTGGTTTTAACCA 5026 36 100.0 35 .................................... TGCCTGACAGAGGCAATGCGTGGGCCGTTCCTGTT 5097 36 100.0 39 .................................... GATGAAACATACTAGATCAACGCGTTCGGGGCGGGTGGG 5172 36 100.0 36 .................................... ATTTTATTAAATAACAACTCCAACTGTTTGTTGGAT 5244 36 83.3 231 .............................AA.TTTG CATAGATTATGAAGGAGTTTAAATGGTTTATATTGATGACGATGATAATATTGATGCCGATTTGGAGGAAGGAGACTTAGACTATTTTTGGCTAAACTCCCTCAGCGACAGTTATCAAAGATACCAAGAAGAACTAGAAGATGCTGAAATGGAAATAGCTTATGAGGAAGAGGAGCTTGGATGATGAATGGGAAAAAATGGCTAATTAAGTGCGGAATTAAGTATTGACAA 5511 36 80.6 0 .....G....................T..ATT.G.A | C [5535] ========== ====== ====== ====== ==================================== ======================================================================================================================================================================================================================================= ================== 62 36 99.4 41 GTTCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Left flank : TAGAGGTGTTAGTATGGAGGCAGAAAAGCTGCGATAAACCTTGATACATCACGTAGTAATCAGCAAAAAGAAATAGTGAAGACTAGTCTATGAGAGAATGGCGGGTGCGAGTGTAGTGCGATATCACATAGTGAGTGCCTCGCAAACACACTAAAAATGGGGACTGTGTTTTTTATTACTTTTATAAAGTATTGTTAGAAAAATGGAGGGAGTATAGTTATAACAAGATATTTGGGATAAAATATTGAAAAATATTGTAGTGAATGTAATAATAGAAATAGAAATAAATATGACAATAAAACCAGTGAATCACGAAAAAAAACCGAAGGTCAAGGAAAATGGCTGGAAGGCTAGTAAAGTCGTCGGGAACCTCGGTGCCTTGTCCCATAAGGATTTGAGGCATGTTTTAAGAGTGTATAAGAGGCTGGAATGGGATTTTTTTTCTGACCTTCGGAAAGTGGGTCTAGACAGTAGACAGGGTAAGGGGTTAAAATGGAGGG # Right flank : ATTCTTCACAGTCATCGCTGTCGTCTTCAGGATAGTAGCTGTAAAACTTCCTCATAAAACTACAGTACAAACTTTTTACCTCATCTGCATTACCGCTTATTTTGTCTGGCAGCCAGTCGCTGTTGTAAGCATTAACAAACTTGATCAAGTTATCTACAGTTGGGTGGAACTGTGGTAAGTCCTTGATTATAGATTCTATTATTTCCAGTTTGTTAAGTTGGTCACAGTTAATTTCTAACTCATTAAAGAAATACTTTAGAGACTCTTTGTTGTTAAACAATTCTTTGTGATACTCAACGTCAAAGTTCTCAACCCTTATAATTTCTCCAAGGTTTTCATTTAGCTTACCGCTGTTAACTATCAAACTTACAGGTGGAGTTGGAAAATACCCGAGGCTCTGTTCTCTTACAAAGTTGTTAATGTTATTAACAATGTAAGAATAACAAGGGTGGTAACTTCCACTAGGAAAAGAACGGTTCTCATCGATGACGTAACCCATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCACTCGCTGGGGACATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //