Array 1 43116-44608 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOEK01000010.1 Escherichia coli strain IBS69 scaffold_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 43116 29 100.0 32 ............................. ATCGATATGTACGTTAGCGAGGGGATCACGCA 43177 29 100.0 32 ............................. GGGACCGCCGTAGATGAAATTAAATCATTCAG 43238 29 100.0 32 ............................. CCCTTCTCTGACAGGTTTGCGGGCCTGTACCC 43299 29 100.0 32 ............................. ATCACCTTCGGCGCTTACGTCGCCGTCCGTGT 43360 29 100.0 32 ............................. GGGTATATCTTGTACGCGACTGATCCTGATTT 43421 29 100.0 32 ............................. GAGCGTAGAGATTCTCGAAACCGATCCGGACG 43482 29 100.0 32 ............................. GACGTTGCGCGCACTAAGAAAAACAGGTTCGA 43543 29 96.6 32 ............T................ CTGAAATCAATCGCCGGTCGTCGCCACGTTAC 43604 29 100.0 32 ............................. TCATCGAAAACCAGCGGATCGAATGGGACGCC 43665 29 100.0 32 ............................. AGACGGCGCGTAAAACTCATACGGCGACAAAT 43726 29 100.0 32 ............................. CTCGCGGGCGTGGAATTTAACGAACGGTTACC 43787 29 100.0 32 ............................. TCGGGACGCTGCGCGATCTGCATAGCAACGCA 43848 29 100.0 32 ............................. GTATTTTTGCTGACGGATTCTCAGAGAGTTTC 43909 29 100.0 32 ............................. TTTCTATCTCCCAGTGGGAGAGAGATGACAGT 43970 29 100.0 32 ............................. GTTTTGGCGATATCACCTGATGCCTGCAATCC 44031 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 44092 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 44153 29 100.0 32 ............................. TTAAAACATTTTCCGAGCTTTGCGATTTATAT 44214 29 100.0 32 ............................. TAAAAATCATCATGGAAAATCAACCCGGCGAC 44275 29 100.0 32 ............................. AGCGCGCGCGGGCTACTGCACTCGGTGATAAC 44336 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 44397 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 44458 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 44519 29 93.1 32 .A.C......................... GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT 44580 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 70308-72166 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOEK01000010.1 Escherichia coli strain IBS69 scaffold_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70308 29 100.0 32 ............................. CCATAAATATTATTCCAATCTGGTCGGCTATC 70369 29 100.0 32 ............................. AACGGCTACGGCACGGAGGTTACCAATCAGAT 70430 29 100.0 32 ............................. ACATACTTTGCAGGCGATCGGCAGCTCTGGAA 70491 29 100.0 32 ............................. TTCAGGAAACCGGCGACAGCTCAGCTGATAAT 70552 29 100.0 32 ............................. CCTCTGCCGCACTGGCTCCTGACAGCCTCAGC 70613 29 100.0 32 ............................. AATTTTGGCAGCGTGTAAAATCCACTTTTCAG 70674 29 100.0 32 ............................. ACGACGACGGCAGCGCAGCAAACTGGCACGGG 70735 29 100.0 32 ............................. TAACGGCGAGGGAGTGAGCGAGGTATTTATTA 70796 29 100.0 32 ............................. TTACAGCGCGTTGCGAAACGCTGCGGCGATGT 70857 29 100.0 32 ............................. CAAATATATTTTGCGTTAATTATTCGAGGTAA 70918 29 100.0 32 ............................. GCAAAATATTCAATCACCCCACTGGGTAAACC 70979 29 100.0 32 ............................. GAATACCGATTCATAACGGCGGAAATGTGGAT 71040 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 71101 29 100.0 32 ............................. GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG 71162 29 100.0 32 ............................. GACACGGATAACAGCTACCTGCAAAATTTAAT 71223 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 71284 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 71345 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 71406 29 100.0 32 ............................. GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 71467 29 100.0 32 ............................. ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 71528 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 71589 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 71650 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 71711 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 71772 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 71833 29 100.0 32 ............................. AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 71894 29 100.0 32 ............................. GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 71955 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 72016 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 72077 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 72138 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 31 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //