Array 1 25003-22885 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQVS01000003.1 Prevotella oralis strain DSM 20702, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 25002 47 100.0 30 ............................................... TCAATTGCCCAAGCATTTTGCGTACTAATT 24925 47 100.0 30 ............................................... ACATCATCGCTGTGCCCGAACTCCTCGATA 24848 47 100.0 30 ............................................... AACCCTCGGTGAAATTGCAGCTTTCATTGG 24771 47 100.0 30 ............................................... TAGTTCTCCCCTTACTTCTATGTAACCATT 24694 47 100.0 30 ............................................... AGCGTGTGGCCGTCACCGTGGCCAATAAAA 24617 47 100.0 30 ............................................... ACCTCACGCGCTATTCGCTTTCTCCGAAGA 24540 47 100.0 30 ............................................... CGATACACCTATATATATTGAGATACCATC 24463 47 100.0 30 ............................................... TGAAACACAATTCGTTGATATTCAATAAAG 24386 47 100.0 29 ............................................... TCCATTGCCTTCTTCGTATTGAAGCGGCG 24310 47 100.0 29 ............................................... CTGATGTTGCGCGGATAAAAACCGATAAT 24234 47 100.0 29 ............................................... TTGCAATCGGTAATATATTTATAAGCGGT 24158 47 100.0 30 ............................................... TATTAGTTCTTTTACCCTATTCAGCAGCTT 24081 47 100.0 30 ............................................... ACGGCTGCCGTAATACGCGCGGCCTGTAAA 24004 47 100.0 29 ............................................... ATATGACCAATTAAAACCGCCAGCACTCC 23928 47 100.0 30 ............................................... TATAAAGCCCTTGTTTATAAGCATTGCGAC 23851 47 100.0 29 ............................................... TGTTTTGGGATTTAAATGTTGGTAATCCT 23775 47 97.9 30 .........A..................................... ACCTTTACCATGGTCTCATGATCGTCATAT 23698 47 97.9 30 .........A..................................... TAAGGCTTTATCAACGCCTGGAGGGCATCC 23621 47 97.9 30 .........A..................................... TGCATCGATTTTTCACCTTTGCCGGACTTC 23544 47 97.9 29 .........A..................................... TTTCGCGCTATAATCTTACTTTTTAATTC 23468 47 97.9 29 .........A..................................... TTTCGCGCTATAATCTTACTTTTTAATTC 23392 47 97.9 30 .........A..................................... AGGAGATAAAAAGACGCACACAGGATAACA 23315 47 97.9 30 .........A..................................... ATAAAACAAACATAATCATCAAGAGATACA 23238 47 95.7 29 .........A..............C...................... TTTATCGTACTTGGAATAATTGCGAATAT 23162 47 95.7 30 .........A..............C...................... ATAAACACGTATTAAGGCTAAGACAAAGAT 23085 47 95.7 30 .........A..............C...................... GAGTGGGACGATTGGATGAACACGTGGGAA 23008 47 95.7 30 .........A..............C...................... GTTGGGCTTTTAATTGAATGAGATATGAAA 22931 47 95.7 0 .........A..............C...................... | ========== ====== ====== ====== =============================================== ============================== ================== 28 47 98.7 30 GATGTTTCCGATATTGCAAAGATAGTAATTTTAAAGCAAATCACAAC # Left flank : AATAAGTGCTTCAACGGAGAACTTCGTAAGATTTCTTATCCTGAAATAACATCATAATGGATAGACTGAGTGAATATAGAGTTATGTGGTTACTTGTTCTTTTTGATTTGCCGACAGATACAAAGAAAGACCTTCGGGCTTACACGCTTTTCAGGAAGAATCTAATAAAAGATGGCTTTACTATGTTTCAGTTCTCCATCTACGTACGTCATTGTGCAAGTATGGAAAATGCGGAAGTGCATAAAAAACGAGTAAAGTCATTCCTGCCTGAGTTTGGAAAAGTAGGCATAGTGTGCCTCACAGACAAGCAGTTTGGCAATATTGAATTGTTCTTTGGTAGTAAACCAACACCTCCAAATGCTCCCGGTCAACAACTGGAACTATTCTAATACAAAAGCGAATTCCATTTAAAATATGGAATTCGCTCCCTAAGAAACATCATTTTTTCTTTTTCCAATATCGTTATAAAACATTGAATCACACAATATTATGTAACTCCT # Right flank : GGGTAAAATGCGTACAACGAATTACACGAGTACATATGCAAATTGCATGGTCTTTCGGAGCCAAAGGGGTTGTTGTTCAGGCGGTGGCAATGCATGTAGCTATTATGGGGCTGATGACTGTTACTAGTGTAGGATTGGCTATAATGGCTGTATCAGCTATTATATCGGCATTTTCCGACAAAGCGGGGAATGCTACTGCAGAAATGAAAAAGGCCGAAACCACAATGAAAGACTACGCCACGGCCAATAACACCGAGACGGAGTCCGTTAAACAGGCAAGGGCTGCGCTTGAGATCAATATCGCTAAATTAAAGGATTTCCACGGCACAAAACAGCAGGAAAAGAAAATCGTCGAGGAAATGAACGACACCTACGGCGAGACGATGGGATACTTTTCAAAGGTATCTGAATGGTATGACGCTCTTGTCAAAAACAGCGAGGCATATTGTCGGCAGATGATTGCAGAGGCAAAAGCTCGTAATTTGGCAAATCAAATAGCA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGTTTCCGATATTGCAAAGATAGTAATTTTAAAGCAAATCACAAC # Alternate repeat : GATGTTTCCAATATTGCAAAGATAGTAATTTTAAAGCAAATCACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //