Array 1 315374-314745 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BMIQ01000006.1 Aureimonas endophytica strain CGMCC 1.15367 sequence06, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    315373	    32	  75.0	    36	A...T.A.T.TG.AC.................	CTCTGCATCTCCAAGAAGAACGGGAAGTCGACGCTC	
    315305	    32	 100.0	    34	................................	AATAAGGGCGACCGGGTTTACCTCGCCTTGCCGG  	
    315239	    32	 100.0	    34	................................	TCGCAAGCGTTGATCGTCGGGCCGTAGGCGACGG  	
    315173	    32	 100.0	    34	................................	TGGACGAAGAAGACGTCGGTGATCGACGTCGTGG  	
    315107	    32	 100.0	    33	................................	TCGGCGTTGTCGCGGACCCACGCCTGCGCTTCC   	
    315042	    32	 100.0	    34	................................	CAGAATGGCAGCGGCCAAGCAGTGCAACGCACCT  	
    314976	    32	  96.9	    34	..G.............................	TGCGAGAACGGCAGATAGTTTCCGCCCGGCGTCT  	
    314910	    32	  96.9	    36	...................G............	AGCGTCCTGAAGCTCGTGCCGATGCTGGAGGAGATC	T [314890]
    314841	    31	  87.5	    33	..................-.....AG.C....	TCGCCGGGCAGATCGCCAAGGTTGAGGACCTGC   	
    314777	    32	  71.9	     0	.......C.......A....A..TT...CTTG	|                                   	G [314767]
==========	======	======	======	================================	====================================	==================
        10	    32	  92.8	    34	GTCGCCCTCCACGCGGGGGCGTGGGTCGAAAC	                                    	       

# Left flank :   CCGGCTTCGGCGAGCCGGAGGGCGAGCTCGCCGTCCTGCGCGCCCGCATCCTCGCGCATGTGCGGGCCAAGGCCGCGATGCCGCCCGGCCTCTTCACGCTGAACGTGCCGACCGGCGGCGGCAAGACGCTGGCCTCGCTCGGCTTCGCCCTCGACCATGCCGCCTTCCACAACGCGGCGGCCGGCGCGGAGCGCTTCCGCCGCATCATCACCGCCATCCCCTTCACCTCCGTCACCGAGCAGACGGCGGCCGTGTTCCGCGAGGTGCTGGGCGAGGATCTCGTCTTGGAACATCATTCCGGCTTCGAGACCGAGGAGGAAAAGCCGCAGGCTTCTTCCAGTGTCGAGGCCGACAGCCGCTGGGCGACGAAGGATAAGATGCGCCTCGCCATGGAGGACTGGGCGGCTCCCGTCGTGGTGACCACCCACGTCCAGCTTTTCGAGAGCCTGTTCGCCTCCCGCACGTCGCGGACGCGCAAATTGCACAATATCGCCAATAGC
# Right flank :  GAGAAATCCATCCGTCGCGAAGCCCGGCTTTCCATGCCGAGCGGCGACGCGGCGTCTCAGCCGTGTTTCCGCCGTCTGGCTCGGCCGGTGATTTGTCACTAAGCGAGGCGTGTCCCGTTTTCCTGCCGGAAGCGATCCTCGCATGTTCTATTTCGCCTATGGCTCCAATCTCTGCCGCCGGCATTTTTCGGCGCTCTGCCCGGCGGCGGGGCTGGTCGGGCCGGCGCGGCTCGTCGGCTACCGGCTCGTCTTCCGGGGCTTCGCCGACATCGAGCCGGCGCCAGGGGAATGCGTGCCGGGCGGGCTCTGGCGCGTCACACCCGCCTGCCGCGCGGCGCTCGACCGCTACGAGGAGGTGGAGCGCGGCCTCTATCGCCCCGTCGATGTCGATGTCGAACTCGTGCCACGCGAGGAGGGCGAAGGGCGGAGCCCGATCGCGGCCTTTTCCTATCGGATGCTGGAAGAGGGCTATCGCCCGCCGGTGCCGGCCTATCTCTCGG

# Questionable array : NO	 Score: 5.82
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCTCCACGCGGGGGCGTGGGTCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.40,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [16-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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