Array 1 259009-260100 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAEEB010000003.1 Lactobacillus melliventris strain ESL0393 Ga0227359_1003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 259009 36 100.0 30 .................................... CCAAGTATCATTGGGTGCATGAATATTGGG 259075 36 100.0 30 .................................... TATTAGGCTAAGAATACAGGTTCCAATCTT 259141 36 100.0 30 .................................... TAAATTTATACAATTTTGGGAAAATTTTGC 259207 36 100.0 30 .................................... CAAAACCTCCCACTAAGTAATAACAATAGT 259273 36 100.0 30 .................................... AACTACGTAGGCAAGCTTGCCCAAAAGAAT 259339 36 100.0 30 .................................... CTGTTAGATCAGCTAAGAAGTAGAGCAGTG 259405 36 100.0 30 .................................... TAATATTGATCTTTATTTTGCTTTCCCTCT 259471 36 100.0 30 .................................... AAATTAGCTTGACACCTTACCCAGCATATA 259537 36 97.2 30 ...................................A AGTAGAGCAGGCACACAGACTATCCACCTA 259603 36 100.0 30 .................................... TGGCTACTACAGCAGGCTTTGCGATTGGTG 259669 36 100.0 30 .................................... TGCCAGTGTGCCATATTTGGCTTCTATTTT 259735 36 100.0 30 .................................... AGATGATAATGACCTTAAAGCAAACATGCT 259801 36 100.0 30 .................................... GACTATCAGGAGTATCATAGATTTCAACTT 259867 36 97.2 30 ........................T........... ACACGAAGTTCAAACACTTTGAAGAGGTAA 259933 36 100.0 30 .................................... GTGCCTTCTCAATGAAGGAAACGACGACGG 259999 36 100.0 30 .................................... TAAGGTGTTTCTTAATCCAGGCAATAGCTT 260065 36 72.2 0 ..............A...........CAGCCCA.GT | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 98.0 30 GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Left flank : ATCCATTACTTGGTGGCGATATCACTAAAAAGTATATGCCTCATATTGTGAACAATTATCTGAAAGACTTAGATGAAGAAAATCGCAACAAAATGATTAAATCATTTTATAGTTTAGAGTCAATTTTACAGGATTCACTTTTACTTGAAGACTTACCTTTAGCAATTAATTTTGATGAAGATTTAAAAAAGCTACTTAAATTAACGGAGATACATTTGGATAAATCAATGTTGCTCAGTCCGTATGGTATAATAGAAACAGTTTTAAAAATTCACCAAACATGTGATTTAAAAACTATTCCTGTTGTTTGTAATGTAGCTCATTACTTGGAAAAACAGGAATGGCAAGAGTTAGCTAGTCTTGTCAAAGAAATGAATTTGATTTTGGTTGTAATTGAATTCACGACAAAAGAAAATTTAACAATACCTAAAGACGTACCTTTTTATTTTATTGATAAGGATCTAATCGATTGGTATTAACAACAATATTAAAATCAGATT # Right flank : TATTTACTACCACTATGAATGCAACTATATAAAAATGGATAAAGTAACAAGCATTTTCTCATAGACTATTTTATAAAGATGACAGAAACTTATTGTCAGTAAACCTAGTCTTTATTATTTGAACTAGAATGAAATTTATATATTTTTCTACTCTGTGTCAAATCAAGGCAAGATTAACAATCATCTAGTTGACTATTACTACAAATTAAAAGAGCCACCCTATTCCAAAAAGGATTTGGTAGCTCAAATAGCCTACGTTAACCATTTAAATCGTACAATCATGCATTTGGCTCACATAAATCAAATCTATGATTATCAACAAGCTGTACATTAATAAGGGTTATCTGTTAAACAAATATTTAACTTGTAAAAAGGCGCCTTTTTAAAGTATCTTTAGTATATCCATTTTTAAATCTTTTTGATACTTGAAATTCTATAAGAAATCATATTGATAATGCAAAGATAAATAGTAACAGATAATAAATCTGCTAATTAATCAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGATGATTGTTAGATCAATGATGATTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //