Array 1 1176-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWRB01000136.1 Enterococcus durans strain BIOML-A12 scaffold136_size1219, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1175 33 100.0 33 ................................. CACCACCTTGATGGCCAACGGTGCGTCCCAAGT 1109 33 100.0 37 ................................. ACAAGTCAAGGCCGATTTTGGCTTGATCATAGGGTCG 1039 33 100.0 35 ................................. GTCGCAGTTTGTGGGCGGTGGTGTGCGCCTGTGGT 971 33 100.0 34 ................................. AAGAATGGATGAACTCAGTAAACGGACAGGTTGT 904 33 100.0 35 ................................. TCGTTCAATTTAGTGCGATAGTTTTCGTCGAAAAT 836 33 100.0 33 ................................. GCCAATGGAACGCATGGCTGCGGGTGGTATCTG 770 33 100.0 34 ................................. TCGGTTAAACGTATTCTGTAGAGCGCGGGAGCGG 703 33 100.0 34 ................................. AACAATCAAATGGCACAGCTCAATACGGTCGGAA 636 33 100.0 34 ................................. GTGGACGTGTGGTGATTGTGCTTATGCCGACTGC 569 33 100.0 33 ................................. TCCCACCGTTTGACGCTCAAAACCTTGACGTCG 503 33 100.0 34 ................................. CCTCGGCTGATGAATTGCTTGTCGGTTCCGTCCG 436 33 100.0 35 ................................. AGGAAGTGAAAGTGGAGAAGAAATGAAGCGTATTC 368 33 100.0 34 ................................. CTCGTCATGCCAGTCTCCCGCTCGACGGTTACCA 301 33 100.0 33 ................................. GTGTATTTTGTCGATATTGCGTCCGATTGTTTA 235 33 100.0 35 ................................. CGGCATGGCGTGCAAGTCATGGACGATTACGGGAC 167 33 100.0 34 ................................. CAGATCATCCAAGGTTTTGTTGATGCGCTCGAAC 100 33 100.0 34 ................................. GATAGGTGGCTTATCTCCATGCCTCAGATACGCC 33 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 18 33 100.0 34 GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Left flank : GGATTGAAATGATAGGTGGCTTATCTCCATGCCTCAGATACGC # Right flank : T # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 77606-77971 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWRB01000002.1 Enterococcus durans strain BIOML-A12 scaffold2_size80814, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 77606 36 100.0 30 .................................... ACAGGATCAGGAGTTCGAACATCAAGGCAT 77672 36 100.0 30 .................................... AACTAACCTATTTGTCATGGGCATGGGCGT 77738 36 100.0 30 .................................... TAAAAGAAGTCGCTGATCACCATTGAGTTC 77804 36 100.0 30 .................................... TTAGAAACAATTCCAAACTTCAAAGAACTA 77870 36 100.0 30 .................................... TTCATCATTACTTCAAATATTTCTTCGCCT 77936 36 88.9 0 ..........................T..T...GT. | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 98.1 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GAAGTAAAGCGAAAGATCATGGTAAAGGAAACCAAATCGAAGGACGTATTTTTGAAGGGCAAAAAATGGTCGTAATCGAAGATCTGATTTCCACTGGCGGAAGTGTACTAGAAGCAGCAGAAGCTGCTAAACGTGAAGGGGCGAATGTTTTAGGTGTGGCTGCTATCTTCACGTATGAATTACCAAAAGGAAAAGCAAACTTTGCTAATGCGGAAATGCCATTATTGACCCTTACGAATTATTCCGTGCTGATTGAAGCAGCACTTGAAGAAAAATACATTGATGAAACAGAATTAAACCTATTGAAGGAATGGAAACAAGATCCTGAAAACTGGAAGAAAAACTGATTGCTTAACATCTGTAAAAAATATTTTAGCATCAGAAATAAAATGGTATACTAGTGTTGAATAAACAACAAATAAAGAAGTATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCTCAGTGATAAATCACGTAGAAAAAATTTTTTCTACGAG # Right flank : CATCAACTGTTTTTGAGTAGTGTTATTTGAAAATACGATATACGAGTGGTAGAGACTAGAATGCTTTCTTCTGGTTTCTATTTTTTTATATAAATTGGGGATGATTTTGTTAAAATTATAAAAAAATCAATGAAAATAAAACGTGTTATTTGCAAATTTTAGTTATTTAATGGTAGGATTATCGGAAAAAGTATTCCATTAAGGGAGGTCTATTTATGGGATTGAATGAATTTATTTTGGGATTGAACAACTTAGAAAAAATCACTCGGGCTCCTGGTTTCTTTAAATTCACCGAGCATACGGTAGCGGCACACTCGTATCGAGTGGCTTCGATTGCTCAAGTTTTAGGGGATATCGAAGAAGTAAATGGTCAAAAGATCGACTGGAAACTGCTCTATGAAAAGGCACTGAACCATGATTATACCGAGCGCTTCATTGGTGACATCAAAACTCCAGTAAAATATGCAAGTAAAGAGTTGCGGGGGATGTTGCAAACGGTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //