Array 1 4-1355 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRTY01000212.1 Pontibacter sp. GY10130 Scaffold212, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 100.0 36 ..................................... CAGCCAGGCGCGCGCTAATTGTAAAGAAAATGGCAA 77 37 100.0 37 ..................................... CCTTTGGGTATGAACAGAAAAGAAATAGGCGAAATCA 151 37 100.0 35 ..................................... ATAAGTCAAAAGTGTGGGTAGCTCAAAATTTCAAC 223 37 100.0 36 ..................................... CTCCTGCCTCTTTTAAGGTGCTTGTTAGTTGTTTCC 296 37 100.0 36 ..................................... AAGCGATTTGCCGAACTAAAGTGAAATAAGCTATGA 369 37 100.0 36 ..................................... ATCGCAAAAGAATTAGGTATATCTGCACAGTCTCTA 442 37 100.0 36 ..................................... TCGAAAAATGTATGGGTATTCTGCAAAATGGTAACT 515 37 100.0 36 ..................................... AATGAAAGTCGTTGATTACAACATGATCCCGGACTT 588 37 100.0 36 ..................................... AAGCTTCAATAGCTGCCAGTTCTTCGTCGGTAAGCT 661 37 100.0 36 ..................................... TGTTCCTAATGTTAGAAGCACATCTTTTGGAATGTA 734 37 100.0 36 ..................................... TGTAGACGACACGCCAGGCTTAACCATCCTGCAGCT 807 37 100.0 36 ..................................... CAACCAGCTTACAATAAGGCAAAACGGCAGTACTGA 880 37 100.0 36 ..................................... GAGATACGGTGCTAAGCCTGGAAACAAAATACACAA 953 37 100.0 37 ..................................... AAAGTGTATTGTGTGGTTTCCCCGGTCTTTTTAGCAA 1027 37 100.0 36 ..................................... GGTATTATGCTGCGGCTGCTTTTCTGAAAGCGAGTA 1100 37 100.0 36 ..................................... TAATCTTAAAGAGAGCAAAAGGGCTGAAAACCTCGT 1173 37 100.0 36 ..................................... TAGAATGTAGAGCCTGTCATCTTGTATGGGAATCAG 1246 37 100.0 36 ..................................... AATACTTAGAACAACAAGGCATACAAGCCCCTCTTG 1319 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 19 37 100.0 36 CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Left flank : TTAC # Right flank : GCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [5.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 23533-24519 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRTY01000093.1 Pontibacter sp. GY10130 Scaffold93, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 23533 37 100.0 36 ..................................... CAACTATTACTGTTTCTGCTCAAGCACTGGAGCTAG 23606 37 100.0 36 ..................................... ACCAAGTCAGCTAAACTGCCAACGTGCTTAAAGGTT 23679 37 100.0 36 ..................................... TTTACTATGATCTCGCAATTATTCCTGGGCTTATCT 23752 37 100.0 36 ..................................... TAATCAAGTTGTAGTGATGCCGGATCATCAAAAGGC 23825 37 100.0 36 ..................................... ATGTCCATATAATTGACAAGGACTTGCACAGCTGCT 23898 37 100.0 36 ..................................... TCATAGCCAAACACCGCAATGGGGACTTAGACGAAA 23971 37 100.0 36 ..................................... GAAACAATGGGCAATAAGGCAGGAGCCGCCATTGTG 24044 37 100.0 36 ..................................... AAAGTTACAGGATAAAAAACTATTCGAAAGGAGCAC 24117 37 100.0 36 ..................................... AGGCTTCGGATAGTTGTATTCCTTCCCGTTTCGCCT 24190 37 100.0 36 ..................................... TAGCTCTCGTACTGTGCGGCTCTTTCAGGTGGGCAC 24263 37 100.0 37 ..................................... GAATTTGGGCTGTAGCTTCAATAAATGATTGGGCTGC 24337 37 100.0 36 ..................................... TTTTCTTTCATATAGATTCTACAATCAAACATTATC 24410 37 100.0 36 ..................................... TGGCAAAGCAAAATGTTTCGGTATATCGGTCATTTG 24483 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 14 37 100.0 36 CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Left flank : ACCATTAGACTATAAATTCGCTCAATTCAAAGACAAAATATACGATACATACCGCACCCAACTCTACTGCTATGCCTGGCTGATAGAGCAGAACTTCGGTAAAAAGGTGGATAAAGGCTTTCTTGTATACACACGGAGTCAGAATAAATTAGTAGAGGTTCCGATTTTGGAGACAGACAAGAAAGAAGTAGAAAATTGTGTGAAACAGATTTATCATATAATCGAGGAAAACCATTTCCCAAAAGCTACCAAATACCGTAAAAGATGTTTAGATTGCACCTACAGGAATGTTTGTGTCAAATAACGAGGTTCCGGGTACGGATTTATTTCAGTACTCCCAGAATTAAGGTTTAAAGCATTGATTTACAATTAATAACGTATTCGGAAAAATAAAAAATTTATATGAAATTCAGCTCTTTGACATATTGTAAAATCAGAAAAAGAGGAGTAGGAAATAGTGCCTATGTCACTAAGAATCAGATCGATGTGGAACGTGACGA # Right flank : ATAAACTCTGAAGGCACATCAGTAAAAAGATTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 1 41-2496 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRTY01000171.1 Pontibacter sp. GY10130 Scaffold171, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 41 37 100.0 36 ..................................... TGTGCGCGCATGCGACATGGGCCACAAACGAGCGAT 114 37 100.0 36 ..................................... AGATCAAGATTGACGAAGGGGCACTCAATAAGCGAA 187 37 100.0 37 ..................................... TGAAACTATACCCTAAAACAGAAGAAATTAAAGGCGA 261 37 100.0 36 ..................................... CTGTCAGATAAGCGAAGTCCTGATCGTTATAGTGAA 334 37 100.0 36 ..................................... TTTTTCCATCGACACAGCCAAACCCAGGCATGGTTT 407 37 100.0 38 ..................................... TACTCTATTCTGGGCTTTTTGCCATCCACATACACCAG 482 37 100.0 36 ..................................... GTGAAAATGCCTTTCAAAAACTAAAAAAACATCTAC 555 37 100.0 37 ..................................... TGGAATTGGACCAGACAAGGGATTATATCAGAGTTCT 629 37 100.0 36 ..................................... TCAGGGATATCTATATTACCGACACTGCATTGTACC 702 37 100.0 37 ..................................... GCCAAGCTTCATCACTCTGGAAGTCAGGCACCGTAAA 776 37 100.0 36 ..................................... GATAATACCGCTTCGTGCGCCTGGGGGTCATTACTA 849 37 100.0 37 ..................................... CTTCTAAGGGTTTAGAGGCTTCCTTGAGGAACCTGGA 923 37 100.0 36 ..................................... AGAATACTTTCCGGGACCTGGCAGCGCTCTACTACC 996 37 100.0 36 ..................................... TGCCTTTTGGAGGGGGCGGTGGTGCTGCCCCAGTGA 1069 37 100.0 36 ..................................... AGGCAGACGGCTGCAGGATTGAAAAAGGGCGGGTAT 1142 37 100.0 36 ..................................... TGACGGATTCTGCCTTAGAGTTCAACATCAACGACC 1215 37 100.0 36 ..................................... GCAACGCCAGATGTAGAGCTAGGGGGCATCTTTGCA 1288 37 100.0 36 ..................................... TAACTTTCCAAATACCTCTAATGCTATCACCTGAAA 1361 37 100.0 37 ..................................... TCCATCTCCCGTTCTTTGACCTTCCCGAACATATCCA 1435 37 100.0 36 ..................................... TTAAAATAAGCGGGTTCATACTTCAGTATAAAGGCC 1508 37 100.0 36 ..................................... AAGACAGCAAAGAAGAGGACGATGAAAAACACGTTC 1581 37 100.0 36 ..................................... CTGCGACTGCCTGAAGTCCCAAAAGATCATCAAAGA 1654 37 100.0 36 ..................................... CACAGCCCCTAATGTGCTACTTCCTAATCTTCCCCC 1727 37 100.0 36 ..................................... CTAATGGAATCACTAGAAACCAAAATAGGCGTGATA 1800 37 100.0 36 ..................................... CTGCTTCGGATCATGCTGCTTTTCTTTTCGGGTATA 1873 37 100.0 37 ..................................... TTTGTCCTGAGCCGTTGGTGTAGGTTTTGCCAATCCC 1947 37 100.0 36 ..................................... TCCAGCCTTACTTCTATCTTCAGGCGGTCATAGTTG 2020 37 100.0 36 ..................................... GAAAAGAACAGCTTGCTATTCAAAAGGCACTAGGCG 2093 37 100.0 36 ..................................... AGCCGGTAGAAGTAGCCATAGCCGAAATGTCTGCCT 2166 37 100.0 36 ..................................... GTAGTCTTCAGTAGTTCTCATCAATACACCACCTTA 2239 37 100.0 37 ..................................... ATAGTGGATACCATCGAGAACAAGCGGGAAACCATTA 2313 37 100.0 36 ..................................... TTAGTACAGCTTGATTACGTCTTTCAAACTAACTAC 2386 37 89.2 36 .....................G..T..........TT AGAATGAGCGTCGCTCGCAATTACAATAAATACAAC 2459 37 70.3 0 ...A.GA.........G.TT.GG.T..A........T | G [2493] ========== ====== ====== ====== ===================================== ====================================== ================== 34 37 98.8 36 CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Left flank : AAACCATAATAGTGTTATGTGGCACAGCCCGTAAGGGCCGC # Right flank : TTTATTACTTGCAGCGGATAAATTGCTTGACAAAATTCTTTAGCTTGATGAAGCCATTAATGCAGGGTTTAGGTTATAGTAGTTGCATAATTAAACAATTATTCTAATAAAAATACCCTTCCGATGGTAAAATGAATGTTTTGGGGCCAAGGGTAATTGAGGGGAACAGCGAAAAACCAGCATAAAAAAAACCGCCACTCCTGCAGTAGGAATGGCGGCCAAATACTAAAAAATATTAAACTTTAATAGCCAGAGGCATGGGTGCTGGTATTTTCAGCTACAGATGCAGCCTGGACGTGCAGCAACTGGTAACACTGCCGGGCAATTTCCTGCTCCTCGTTCGTCGGAACTACTAGCACCTTTACCGGTGAGCCTGCTATGTTTATTTCCCGGATGCCCTTAGCGCGTATCTTGTTCTTTTCCAGATCAAACTGAATACCCAAGAACTCCATTTGCTGGCAAATACGCTCCCGAATAATGGCATCGTTCTCGCCTACACC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 33-7466 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRTY01000165.1 Pontibacter sp. GY10130 Scaffold165, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 33 37 100.0 36 ..................................... AAGTCTTACTTCTTATGTTGTAATCCGTATGCAATT 106 37 100.0 36 ..................................... CTACTGTGGAAGAGATAGCCTCTGCCCTTAGCTGTG 179 37 100.0 36 ..................................... CCTGGAAGCGGGGAGAGGTTACGGTAATGGGCGGTA 252 37 100.0 36 ..................................... TTCTTTCAGATTATGCCACAGGACGCAAGATGCATG 325 37 100.0 36 ..................................... CCAATAGGGTAACGGTATTTACTTTTGTATTGCCTG 398 37 100.0 36 ..................................... GAGCAGATTAATAATGACAACATCGGCATACATACA 471 37 100.0 36 ..................................... ACAGAAAGATACGCCCTGTGTTGCGGATTTAGGATT 544 37 100.0 36 ..................................... GAGATGGTGATCGACGTGGCAAGGCTACTGGATGTG 617 37 100.0 36 ..................................... AAGCCTGTGTACATGGTAACCCTTTTGAAGTTCTGC 690 37 100.0 36 ..................................... GATTTCGGTTACTGGTACTCTCCCAGCAATAAGGAG 763 37 100.0 37 ..................................... TGCGGATCTCCGCATTCTCCCAATTCGCTATAAGTGT 837 37 100.0 37 ..................................... CCAATGTTGTACTAGGCTTATCAGATACTTACCCCCA 911 37 100.0 37 ..................................... CACCGGTACAAGGGTACGCCGTGGGCGATAAAAGAAG 985 37 100.0 39 ..................................... ACGATATGTCGCAACGTATGGCGTCGCAAGCGACCTTAT 1061 37 100.0 37 ..................................... GCAAATTTAATAGTGTCCCATAGTATTAAGAAGTAAT 1135 37 100.0 37 ..................................... TAGGTATTGTAACGTTTAAAATACGATGAAGCTTTAA 1209 37 100.0 36 ..................................... GCTATTACTATAAGTAGCTTCAACATCCATTCGCCT 1282 37 100.0 39 ..................................... AATTGGTTATTTGGAACTGCTAAGTTAACGGGCATATAA 1358 37 100.0 37 ..................................... CTAACACTCCACTTTCAACTAGCTCTTCTTCGGGTAT 1432 37 100.0 36 ..................................... GCCGTTGTGTTGGCTATAGCTATATGGAATACAGCT 1505 37 100.0 36 ..................................... ATTATCGACTCTGCAGACGCGGCAAACCTTTTTGTT 1578 37 100.0 36 ..................................... TTTTTCCTATTGGTCTATATGCCCTTTGGAAATCTG 1651 37 100.0 36 ..................................... TTTTCATACATTTTTGCGAAACAAAGCAAGTTGTTT 1724 37 100.0 37 ..................................... ACAAACCTGTTAAGCTGTATCTTTCTAAGAACTTTGA 1798 37 100.0 36 ..................................... GTGTGTCCATTATTCTGTCGGTTCTTGTGCGTAAAA 1871 37 100.0 36 ..................................... TTTTGCGGGCCGATACCGGGAGCGTTGAAAACAACG 1944 37 100.0 37 ..................................... TCTGTAGTGTAAATAGGTACTAGTCCTTTTTTCTGAA 2018 37 100.0 36 ..................................... CTGTAAAAGGCCATTATAGACTGCAGCGCATAGGTG 2091 37 100.0 36 ..................................... TCCGAAGCTCTTCGTTTTTACTGTTTTTGGTAGCCT 2164 37 100.0 35 ..................................... GATTTCGTGGTGGGGGAAACTAAGCTGGTTTCTGT 2236 37 100.0 36 ..................................... GAGGGTAACGTGAAAGGGTCTGTCGTAAGGTGGTGG 2309 37 100.0 36 ..................................... CAGAGTTGCAGCAGACCGCAGCCGATGCAGTAGACC 2382 37 100.0 37 ..................................... CACTACGCCGGACGCATTCACCTGGTAAGTTGTGACA 2456 37 100.0 36 ..................................... TATCATTACCTCTGTGCAGGTATTGGATGAGCCAAG 2529 37 100.0 36 ..................................... TTAATTTTGGCTACCCATACGTGGTAATAGGAACTG 2602 37 100.0 36 ..................................... TACTCTATTCTAGGCTTTTTACCATCCACATATACC 2675 37 100.0 36 ..................................... TTTCGATTATTCCGATTAACTCTAATTCCTCAAAGT 2748 37 100.0 37 ..................................... GATTTTTGTGAGTTCATTATATGGCAGAATTACAATT 2822 37 100.0 37 ..................................... ACTTTTAGCCAACGGCCCGTTTTGCGAATTTCATAAT 2896 37 100.0 36 ..................................... GAATCGGGGCATCCAGCCTTCTGTAGTATTCCCCTT 2969 37 100.0 36 ..................................... GGCTCAGCTTATCAACGTATTGATCTAGCCAATTAA 3042 37 100.0 39 ..................................... ACGATGAGCAGATGGCGGCTTTCGAGGTGGCTGCTAACT 3118 37 100.0 36 ..................................... GAACTACGATGGCACACGTAACGCCCCCGCCCCTGT 3191 37 100.0 36 ..................................... AAGGCTCTGAGAATCATATCTGCGCTGACTGGTGAA 3264 37 100.0 37 ..................................... AAATCCTCTGTGATGGACCAGGTGCCGCGTAAGGCTG 3338 37 100.0 36 ..................................... TGCCGCAAGACTGATTCAGATACTGCAGCGTGAAAT 3411 37 100.0 36 ..................................... TTTCTGACTAAGGCTTGTGCTACAATCTGACTAGAG 3484 37 100.0 36 ..................................... TTTGCTCATTAGACTTACCGAAACACTTGTGGAAAT 3557 37 100.0 37 ..................................... TATTCAATCCTGCAGTCATCAATATTAAGCTTTGAAA 3631 37 100.0 37 ..................................... GCTGGCCTTGGGCATACAGCTTTTCCAACTCTTCATA 3705 37 100.0 37 ..................................... AATAGGTGTTATAAAAGCTTGCTTGATAGAACTCTAA 3779 37 100.0 36 ..................................... TTAGACCCTAACTCCTTATATGTTACACACTTCCTA 3852 37 100.0 36 ..................................... TGAAACAAGGCTGGGTAAAGCACACCATGATCTTGG 3925 37 100.0 38 ..................................... ATCCCTTCAGGGTACTTATGGAATGGGAATATGCTGGT 4000 37 100.0 36 ..................................... TGTCAGGCCATTTGGTTCCTTCAAGCAATGCGTTAA 4073 37 100.0 36 ..................................... TTTTCTTTGGCGTTAAACTGTTGGCTCGGGTCATAA 4146 37 100.0 36 ..................................... ATTGCATTCTCTATTCCCATCCACCACGGTTTAGCA 4219 37 100.0 36 ..................................... GGCAGTTGCCGCCCTCTGGTGTTCGGAATAGGGTAA 4292 37 100.0 36 ..................................... TTAATTGCACCTTTAACGGGTTGCCGTACAAAGGCA 4365 37 100.0 37 ..................................... AGTATGTGACCGGAGCAAAGGTTCTGGAGCATATTAA 4439 37 100.0 36 ..................................... AGGAAATCCCGGTTATGCGTGTATCGTGTTAAATTC 4512 37 100.0 36 ..................................... ATATAGCTTCTGACCTATGTACTCCCTCGTAAGTGA 4585 37 100.0 39 ..................................... GAGATAGTAAAGGGTAAGCTACAGGTTAAAGCTTAATCT 4661 37 100.0 35 ..................................... AGAGCTACATCGCTTACCTGGAATCCCTTGTGCCG 4733 37 100.0 36 ..................................... ATTCAGGCTTACGGAATGTTGAGAAAACAGCTGGCG 4806 37 100.0 36 ..................................... ATACTTCGCCTTCCGCATCGGTGTACACTAAGTGAA 4879 37 100.0 36 ..................................... GCAGATCAGCACTACGAACCGCTAAAGCATTGGCCG 4952 37 100.0 35 ..................................... ACACATGGAGAGAGCTATGCCGGACACGGCAGCCG 5024 37 100.0 36 ..................................... CGCTGAACCTGGACGAGAAATACGTCAAGGAGCAAG 5097 37 100.0 36 ..................................... TTCACTTCTTCAACGGTACCGGCTTTGTACTGGTAA 5170 37 100.0 37 ..................................... AATCTAGTAAGTCTAGCATCTGTCTATGATGATAATA 5244 37 100.0 36 ..................................... CTCATAGAAGATATTGTAAAGGATATCACCGCCTAC 5317 37 100.0 36 ..................................... ATCTTTGAATCTGGCTACGGTAATAGTGCCCGCGTT 5390 37 100.0 36 ..................................... GATAGCAATTCCTTTATCCAAAGGTCTTTCGGATGA 5463 37 100.0 35 ..................................... AATGCTCATGGGTTATGCCTCCGGATCGTTTTCTG 5535 37 100.0 36 ..................................... TTGCAAGGCGTAACAGTGCTTGACATTGCCAATGGC 5608 37 100.0 36 ..................................... GGCACTGATTAGATACTGAGATAACACCACGTTTAA 5681 37 100.0 36 ..................................... AACATCAAAAGTCATGCAAGTTAGAATCAAAAAAAA 5754 37 100.0 36 ..................................... TGATCTCCGACGGGCCGCTCTGGTTTACGGTCCACT 5827 37 100.0 36 ..................................... CACCACTTGGAAACGCCCAATCTAAAAAGGTTTCTC 5900 37 100.0 37 ..................................... TTTTCATGGTCTGTCTTGTAATAGTTTCTGTATTCTT 5974 37 100.0 37 ..................................... CCGGATTTGAAGTTTATGGCAGATCGTGTTTAGAAAA 6048 37 100.0 37 ..................................... AACATCAAAAGTCATGCAAGTTAGAATCAAAAAAAAT 6122 37 100.0 36 ..................................... TGGGCCGCAAGGCTCCGGACAAATGGCGCTGGGACC 6195 37 100.0 36 ..................................... ATAGATGACAGCTGTAAAAGTATCTGCACTCGCCGC 6268 37 100.0 36 ..................................... TAGATGAGCGTACTGATATCAGAAGATTTAAGCTAT 6341 37 100.0 37 ..................................... ACACTAACAAATCTTAAAACAGATAACACAAAAAATA 6415 37 100.0 37 ..................................... TCTAAGAATAATGGGTAATACTGTTGAAACGTCTTTT 6489 37 100.0 35 ..................................... AGCCTGGGCAGTAGGGTAGGGGAGGAGTTGATTAT 6561 37 100.0 35 ..................................... CTCCTGAAAATACCTACTTTCTGAAATATCCTAAA 6633 37 100.0 37 ..................................... TTGACTGACTTAACAATCTTTTCATCAGAAGAATTAT 6707 37 100.0 35 ..................................... ATAATCAGTACAATACGGCTAAATATCGTTTGTTT 6779 37 100.0 36 ..................................... ATTCTGTTCATCAGATTTGGAACGTAGAAGAGCATG 6852 37 100.0 36 ..................................... TAGTACAAAATAATAACCTTATATTTGTGACGTACT 6925 37 100.0 36 ..................................... ACACTGTGTCGGCACTGTTGGTGCCTGGTTAACACT 6998 37 100.0 34 ..................................... CTGTAGTGGCCACCATTACCGAAAAAATTAGCGG 7069 37 100.0 36 ..................................... AGAAACTGGTTGTATGTACCGCTCTCCCCATCCAGC 7142 37 100.0 36 ..................................... AAGAGAAGCAGCCTGCCGCTTTGCCAAGCCTGAAGC 7215 37 100.0 36 ..................................... CTGACCAGGGCAATTACCAGGGGCTGGCACCAGGCA 7288 37 100.0 36 ..................................... AAGGTTGTTAGCAAGGGCCGGCAGGGCTACACATTT 7361 37 100.0 36 ..................................... ATGCAAGCTACTGCATGGGCCGGGCTAAGAGTAGGA 7434 33 89.2 0 .................................---- | ========== ====== ====== ====== ===================================== ======================================= ================== 102 37 99.9 36 CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Left flank : ACGCTCTTTCGGAGGTGTAATGGTGTATTTGCC # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGCAGCTTATCCAGCATAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [28.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //