Array 1 60356-60506 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZED01000003.1 Lentilactobacillus otakiensis DSM 19908 = JCM 15040 strain DSM 19908 NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 60356 29 100.0 32 ............................. TACGGTGCTGACGGTCAACAAGATTACACTAA 60417 29 96.6 32 ............................T ACCGTCGGTGATTTCGATGACATGCAAAAGGG 60478 29 75.9 0 .............A.A.G.....T..TAA | ========== ====== ====== ====== ============================= ================================ ================== 3 29 90.8 32 GTATTCCCCACGTGTGTAGGGGTGATCCC # Left flank : TTGGATGGAGATCATTCAGCCTGGAATTAGTTGTATCCATCAGGATTCGTTTAATTTAGGCGTCACGGCTGTGAATACACTTGTTCGTAAGCTAGAGGATGAAAAGACTAAACATTTTGTGCCTCAGTTGATTGAGGTGCCTACTATGATTAAGATGCGCGGATCGTATTGATCGGCGTTTTTTTTGTCCACTGAAGTTGGCAAAACACTTTTTACTTGCAGATGTGCTGATAGTTTTATGGCCACCAATATTTCATCCAGTTTGGCATTCTGCTTTGTAATGGTTGATTAAATGGCTACACTCGTTCATGAGAAATAGCGAGGATAGGGGTGTCAATACATTAAAATCAAAATTCAAGGGGCTTTAATTTGCTCTTTTTTATCACTAATCCTTGATGATATACTTAAGCATATCGTAGAAGTTTGCAAGCAGATCAAAAAGTCATTGAAAACGAATGACCTTGTGTTTTCAAATGGCTTAATGACGGCGTTTGTTTAGT # Right flank : ATAGCAATGTGAATACAAAAGTTTAAGGAAGTGAGTAAATGAGTATATCGCAGAGCACCAGCAGTCTTTGGGCTAAAAAGAAAGTTGAAAATGGGAAAGATCTTTGGTTACCATTGGTTACTCATCTGATTGATACTAAAAATGTGATGAATTGGTTATATCAGAACTGGCTAAGTGATAGTCAAAGACAACTGTTCAAACAATCACCACTTGGTGCCAATCTTGAAAAGACAGATGTTGAAAAGTTAGTTAAATTCATTGGCTTTTGTCACGACATCGGTAAAGCTACTCCAGTTTTTCAAAGAAAACCATCTCACGCCCATGACGCTGAACTAGACACTCGCGTAATGGAGCAATTACTAAAAAGCGGATTTGCTGGGCTGAATGTTAACGAACTATCCAATACTAAAAAGTCACCACACGCAACGGCTGGTGAAGCACTGCTTGAACGCTGGCAGGTGCCGGTTAGCATTGGTGCAATCATTGGTGGCCATCATGGA # Questionable array : NO Score: 3.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTGTGTAGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 70073-70772 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZED01000003.1 Lentilactobacillus otakiensis DSM 19908 = JCM 15040 strain DSM 19908 NODE_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 70073 29 96.6 32 ............................C TTATGGTGGAAATGCAGTTAAAGAATTTCAAG 70134 29 100.0 32 ............................. ACAAGGATAGTTGATACTTAGACAATGGTGTA 70195 29 96.6 32 ............................C ACTAAAGCAATCACTGTGAAGCTAAATGGAGA 70256 29 100.0 32 ............................. TTCTCGAACGGACTAGCAAAATGTATCAAACG 70317 29 100.0 32 ............................. CATTCTTTATGAGGTATCTGCTGTTCGTTTCC 70378 29 100.0 32 ............................. ACCATTACCATAGACATCAGATTGAATGGTGA 70439 29 100.0 32 ............................. CCATTTCAAAGCTGATTTACCAAGCTCGGCTT 70500 29 96.6 32 ............................C AAGTCTTTGAGTTCCTGTTTCTGCGCGTCAGT 70561 29 96.6 32 ............................C CATAGTTAGCGTGTAATTGATTCTTCTCAATT 70622 29 100.0 32 ............................. AACTACAACAATTCCCATGCTTGGATTGTGGT 70683 29 89.7 32 .................A.....A....G TCCTTTAGGACTACTTCTCCAGTGACTTCTTT 70744 29 75.9 0 ............C..........CTAAAA | ========== ====== ====== ====== ============================= ================================ ================== 12 29 96.0 32 GTATTCCCCACGTATGTGGGGGTGATCCT # Left flank : ACCAAGAACAGTATTATTTCAATTGGTGCTGCTAAATATCTCGCGAACGATAATGTCGTTGAATTTCAACAGCTTGTTAAAATTGATGAGGCTGTACCCGATAAAATAACGGAGTTGACAGGAATTTCATCAGCAATCCTCTCCGATCAAGGCGTGAGCTTAGAAGCGTCTTTATTAGCTTTACGAGATTTTATAGAAGGACTTCCAGTTGTTGGCTATAATTTACATTTTGATCAATCATTTCTTTCTATGGCTTTTAGCAAGTTAGGGCAAAATGATTTAAATAATCAGATGATTGATTTGATGCCAGTTGTGAAGAAGGCTGATCAATTTCTGGATAATTATCGTTTGGAAACGGTGCTCAGAGAATATCATGTTAACAATTCATCTCCACATCATGCGTTGTCAGATGCGAAAGCGACCTTGGAATTGGCGTTGAAGTTGATAAAAAACGGGCATTTGTCGATTTGAAAATGGCTTTAGGACGCTGTTTGTTTAGT # Right flank : AACTCTTTCGTGACTTATTTAATATGAACAGGATGTAACCTTTTGCTATTGTAAAAATTGTTTGCACAACACAAATCGATTCATCATACTTAACTTAATAATAACTGATAGGAGAATAAACATGGCAACATCAAAACAAATCTTAGTTGAGAGCTTACAAACATTCGCAAAAGAAGTTGGCGGGAAAGATTCCAGAGGTAATGAATTTTTTGTTACTCGGGCGGCTGTAACTGATGAACTAACGCCTGATGGTAAAAATTATGCCTTCATCTCGTTAATCAGAAACGATCAGCCAGTTAGTGGTCCATATTCTGGTCTATCCATGAAAGTAAACCCGGGTATCAATCACTATCGAATTTCGCTAGATATTGGAAGTGAGGGATTTGGAGATGATTACCAGCTGGCAGCAACACCAGGTACAAGAAGAAGGTTCCTTGAACTGCAGAGCACAATCAATGAGTATGCAAAGGAAAATGGCAAGAAGATTTCATGTTTCTGTG # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 246346-243407 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZED01000013.1 Lentilactobacillus otakiensis DSM 19908 = JCM 15040 strain DSM 19908 NODE_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 246345 36 100.0 30 .................................... TTTTGGTGATGTAGACTTTAAGACGGAGAG 246279 36 100.0 30 .................................... ATAGGCAAGGGTTTGAGGTGACTACAGAAC 246213 36 100.0 30 .................................... GATCAAATTGCTCAAATGGGTCAAGGAGTT 246147 36 100.0 30 .................................... CACGCGTTTTCTGGACGTTGTTCAATCCAG 246081 36 100.0 30 .................................... TCTGGGTGGTTAACCCGCGTTTTAATTCGC 246015 36 100.0 30 .................................... GGTGAGTATTAATCAATAGCTCTTTTGATA 245949 36 100.0 30 .................................... ACGCCTAAACACCGACGTGTCAACGTTTGT 245883 36 100.0 30 .................................... GTGGATTTGAACTGCCAGATTATTTGGCAA 245817 36 100.0 30 .................................... TAATTGCTTTACCAATCTTACCAATTGCAT 245751 36 100.0 30 .................................... TTCGATCCGATGGAAATGTTCATACTCTTT 245685 36 100.0 30 .................................... ATATCGATAACTTTTTGGAACAGAAGAAGA 245619 36 100.0 30 .................................... CCGCGTGGCTCATAGAATACGGAAATCCAC 245553 36 100.0 30 .................................... TGCAAAGATCTTTGCATTCCCAACTAGTTA 245487 36 100.0 30 .................................... ACTGGACGCAGAAATCCATGGATATGCGAA 245421 36 100.0 30 .................................... TTAAAGTAATTTGAATTCCGTGATTGAGTT 245355 36 100.0 30 .................................... AACTGTTTGAAGGGGAGTTCCATAAATCCT 245289 36 100.0 30 .................................... TAATTCCTGTCGATATTGCACGGTTCAGTC 245223 36 100.0 30 .................................... CAATTTTTAGACTTGGTATCATCCGGAGCA 245157 36 100.0 30 .................................... GATTCTGGCATCAAAGCCACTTCGTCAAAG 245091 36 100.0 30 .................................... AGAGCCTTGTGCCGTGGGATGAATCACTTC 245025 36 100.0 30 .................................... AAACCGTTACGCCGTTTGACTTATTACCAT 244959 36 100.0 30 .................................... AGAACAACTGCGATATTTTCACTACTTCAT 244893 36 100.0 30 .................................... GACACCTTGACCCAACAACAAGCGGTTCTT 244827 36 100.0 29 .................................... TAACGCTTGGTTATAACAATCGTGCAATG 244762 36 100.0 30 .................................... AATCGTCGCAGTTTTACCGCAGAATGATCG 244696 36 100.0 30 .................................... TAAATAATTTTGTTTGCGTAATACTTTGGA 244630 36 100.0 30 .................................... ATCTCGCCGGAATCAATGCCAACGTATTGG 244564 36 100.0 30 .................................... TATAAATGTGGTGGTAAGGTTAGGACGGTT 244498 36 100.0 30 .................................... AAGCATTCGACAATATGATGGCCAACTTTG 244432 36 100.0 30 .................................... CCTTAAAGGACTTGTGTCACGTTGCCTTCG 244366 36 100.0 30 .................................... GAGTACAAAAGGCTGTGGAACAATGCTTCA 244300 36 100.0 30 .................................... TGTATCATGGTTATCAAGCCGCTTACGCAG 244234 36 97.2 30 ..................................T. TCTGATAGTGTATGAGTTCTGAGCCCGCAG 244168 36 100.0 30 .................................... ATGGGTATTGACAACCAAGATTTTATTAAC 244102 36 97.2 30 ....................T............... TACCGCAACCAATAAGGATCGTTGCCTTTC 244036 36 100.0 30 .................................... ATTGGTTCCACTTGCGTAAGTCGTCGATAG 243970 36 100.0 30 .................................... TTGGCGAAATGATCATGTCAACCACACCAG 243904 36 100.0 30 .................................... AGCTTAAAGCAGATGAACAAGCAATCGCAG 243838 36 100.0 30 .................................... GCAAGCTGGAAAGATATGATACGTAAGCAG 243772 36 100.0 30 .................................... GCCGATTCAAAAAATAGAGCAGGCGTTTCG 243706 36 100.0 30 .................................... CCATAAGTGATCTAATAACTTTCATTCCTG 243640 36 100.0 30 .................................... GCAAAGGTTCAGGCTAAGAAACCACCCAAC 243574 36 100.0 30 .................................... TGTAACCACCGTGGCTCCAAACAGAGCCTT 243508 36 97.2 30 .................................T.. TGAGCACGAAAAATGGCACAAAAAGATTGG 243442 36 75.0 0 ..........A..C.......G.......C.TTTTT | ========== ====== ====== ====== ==================================== ============================== ================== 45 36 99.3 30 GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Left flank : CAGTGATGGTGTGAGTGAAAAGTATAGCCCTGGTATTTATAAGCAGTTAGAAGCTGTATTGACTGACGATCAACGTAAGTCAATTACTGACATCAATAGCCAACTGTATACTCTTGTGCAGCAATGCTTATTCATGATTGATCTCCCTTTGGAAGTTACCTATGATTGGGATTTAAAGAAGCTGTTCAAATACTGCAAAATTCACTTTAATGTCGATACCATGCAAAACCCGTATGCTATAATTGAATCAATTATTAAAATTCACTTAGAGTGTGGATTGAAGTCTGCAGTTGGATTAACTAATGTCGCTCATTATCTTAACCAGCAGCAATTAACTGACTTGTCCAAACTCACAAGTTCCACGGGGATCTCGATATTATTAGTAGAATTCACAGATATGAAGTCACAGGAGCTTTATACCAATTGCAATTTCTACTACATTGACGAGGACTTTGTTGATTGGCATGCATAATACATTAAAATCCGGTTATAAAAAATCG # Right flank : TCTAAAGTAACCTCGCTAAATCGTCTCGGCTGTAACACAAATAAATGAGCTTCCAGGTCAGCAAATCACTAACCTGAAAGCTCATTTATTTGTATCTATTTAGCTAATTCCTTGGCCAACGCCAATCCCATTTTCTGAGCAGTTTGAGCAGTTGGATGAATCTCGTGATCTCGTAAAGTATAATTCTTGTTTTGACTGGTAATAATCCCAGGCGCAAATTGATTGAAGTTAATCACAGTGGCACCCAGTGACTTGTACAGCTTGGCTTCCGCAACCCGTAAGTCTTTAAAGGTGTAGCCATACATGTCGCTCATGTTCTCGCGGCTCAGGCCATTAGCATCGTAACGCGAAATTGGCAGCACCCCATAAATCTTAGCGTTTGGATTGAGCTTTTGAATCATGCGAATGTTATAACGCAGATTGTGCATCACATTCTTCAAACTACCGGAACCCGAGTAATTGGTGTAATCATTGGTACCGATGTGGACAAAAATCATGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //