Array 1 119500-117682 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBRN010000004.1 Pediococcus acidilactici strain MSK.2.1 OLEKACAB_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 119499 36 100.0 30 .................................... TATTAATCTCGTCTTGAACTTCTTCAATAG 119433 36 100.0 30 .................................... TCACTAAGTCAATTGCTGGGTACACTCCGG 119367 36 100.0 30 .................................... GGTTATCGTCATCATCATGGAGAAGATATC 119301 36 100.0 30 .................................... TCTGCAAACAAGGAACGTAAGTTAAAATCT 119235 36 100.0 30 .................................... GCCCGAGTTATCTTAGACAACGCTACATTA 119169 36 100.0 30 .................................... AGACGTTTATTACAATGCGCTACGTGTGGC 119103 36 100.0 30 .................................... AAGCATTCTAAATCGCTCGTGCCAATTGTG 119037 36 100.0 30 .................................... AAGTTAGAAGTCTAACGTTATAATAAATAT 118971 36 100.0 30 .................................... CTAAAGTTAATGACGTTCTTGTAAGTCCGG 118905 36 100.0 30 .................................... AAATCACCTAAATCACCTGAGCCATTGACT 118839 36 100.0 30 .................................... AAATCACCTAAATCACCTGAGCCATTGACT 118773 36 100.0 30 .................................... GAAAAACTAGCTAAACAAAACGAAGATTTA 118707 36 100.0 30 .................................... CCGGACAAGCCCGACAACAGCAATAATCAG 118641 36 100.0 30 .................................... GAAAACTTAAATTAATTTAAGTTTATTTAT 118575 36 100.0 30 .................................... TTGGACATACGACACCGCTCACGAAGTTGT 118509 36 100.0 30 .................................... CAAGAAACCGGTGGCATTTATTCGATTGAC 118443 36 100.0 30 .................................... CCAACAGACAGACCCGCAAAGCTTTCCTTT 118377 36 100.0 30 .................................... GGATTATCTTCCGATGTGTCAAGCTCTTCT 118311 36 100.0 30 .................................... CCGCATTGACCATGGGATATCCCACTTTAA 118245 36 100.0 30 .................................... CTTTTGCTCCAAATTCACTCTAACTTCGCT 118179 36 100.0 30 .................................... TACTTGCAACAAGAATTTACCAACGATGAA 118113 36 100.0 30 .................................... TGGTTGCCGGTGTTCCAATCTGATATTTGG 118047 36 100.0 30 .................................... TGGTGTTTTCACCCGGTTTTGGAACACTGT 117981 36 100.0 30 .................................... ACTACAACTTCTACTTCTAAAGAGGTACCA 117915 36 100.0 30 .................................... TAAATTTTCAAGCGCGCCGTTATTGAGTTC 117849 36 100.0 30 .................................... TAGCCATATTCCCTTTTTCTAACTTAATCA 117783 36 100.0 30 .................................... ACTAGATGAGAACAATGGCTTTGAAAAGTT 117717 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.8 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCGATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAATGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAATGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGCTATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //