Array 1 102732-101705 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SRKQ01000002.1 Lactobacillus johnsonii strain Q1-7 NODE_2_length_554798_cov_1081.787709, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	====================================	================================	==================
    102731	    36	 100.0	    30	....................................	GCAAGCCATCAAAATATGATGAGCTAAAGA  	
    102665	    36	 100.0	    30	....................................	GGAAGTCAGACACATTAGCCATTCCTATTC  	
    102599	    36	 100.0	    30	....................................	TAGGAATGAGTCGGACGAGTTATAGCAAAA  	
    102533	    36	 100.0	    30	....................................	TGCTTTAGCAGGTTCACCATTCGTTAGATA  	
    102467	    36	 100.0	    30	....................................	CAAGAGTGCCCTCTATACTGCTTATCCAGT  	
    102401	    36	 100.0	    30	....................................	GGAAGAATTGGGAGAAAATGCAACTGTGTT  	
    102335	    36	 100.0	    30	....................................	TAGTAGGTTAATCCTTGTACGTGGTACAGG  	
    102269	    36	 100.0	    30	....................................	CAAAATAACTCTCAAAGTTTCAATATAGCT  	
    102203	    36	 100.0	    30	....................................	CTCCTTCCTAACGGAATGGAGCATATCATA  	
    102137	    36	 100.0	    30	....................................	ATTGATTTAGTTGTTGACGCTGACCATTTG  	
    102071	    36	 100.0	    30	....................................	AAAGTGATACTTTTTGGCTTGTTGGAAACT  	
    102005	    36	 100.0	    32	....................................	TTTTTTGTGTCTTTTTTTTTGCATAGTTCGTA	
    101937	    36	 100.0	    30	....................................	TTTCATCAATCATCTTTCTCGCCTCCTTAA  	
    101871	    36	 100.0	    30	....................................	TGACCACTTTCTTTAGCGATGTCTAATCTA  	
    101805	    36	 100.0	    30	....................................	ACTACATCGCCAATGACGGTGTGTCCCATT  	
    101739	    35	  77.8	     0	..........A....C.......AT.T-....CT..	|                               	
==========	======	======	======	====================================	================================	==================
        16	    36	  98.6	    30	GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC	                                	       

# Left flank :   CTAAAAATAATTTAGATAAATATATGCCTCTAATTATAAAAAAATATATCGAAAATTTAGATGAAGATAATCGAAATAAGATAATAAAAGCATATTATAATTTAGAATCTTTAGTTCAGGATTCATTATTTTTAGAAGATTTACCGCTAGAAATTGATTTTAGTGAGGATTTAAAGAAGTTTCTAAAATTAGAGAATTTGCATTTGGATTCTAAGTTTTTAAAAGGGCCCTATGCTATAATTGAATCGATCTTAAGAATCCATCAAACATGTAATTTGAAGACTGTGCCAGTTGTCTGTAATGTCGCTCATTATTTAGATAGCACACAGTTAAACATGTTGAACAATTTGCTAAAGTCAATGAAATTGAAAATGATTTTAATAGAATTCACATCTAAGGAGGGTCTGGTTTATCCGAAAGATGCTGATTACTTCTACATTGATGGGGACCTTGTTGATTGGTACTAACAGCTATCATTAAAGGATAATTATAAATTATCG
# Right flank :  TTATAAAAGTCATTAGTATTAACTGAAAATATTGATATTAATGACTTTTTCTTTTATTGAATTTGGTAATCTTATCTAAATTACCATTTTCTTTTGCTTCTAAGTAATTAAAATATTCTTCAGAGAACTTACCGTCTGTTAGCCAGACCATGTTATCGTTCCTTTTGGTTTTATTTTTGGTTCAAAATACACACCTTCAATAATTTAACTATTATTAATTAAAATTTCTAGTTTTAAAAGGACAATAGAACAGAAAAAATGAGAAATCTAAGATTTAAAAAGGCTGATTTTCTATTCATTAGAACAACATATCCTAGTTTATTTATTAAATTTAAGAATAGTTATGAAGAAAATGGAATTGTTAATGTCCCTATGCAAAATGAAAGGGATTATGATTATTACTTTGATGTAGTATATAGCTACCTCATTGAATGAAACGGGGGAGTTAAATGAGGACGGTCTAAGACTTGAGGCTGCGTGGGATTATGCAGACTGGTCGA

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [83.3-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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