Array 1 8072-8400 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHIC01000002.1 Suttonella ornithocola strain NCTC13337, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 8072 29 96.6 31 ............................A TATTGTTGTGGCTTTTCTTTTAATTCTATCA 8132 29 96.6 31 ............................G ACTGTTGAGCCGTCAGGCAATACGGGTTCCA 8192 29 100.0 31 ............................. AAGCAAGCCTGCGCATCTAAATACACCATGA 8252 29 96.6 31 ............................T GCTTAGTGTCGGGCTATGGCTCAACCCCACC 8312 29 100.0 31 ............................. AGAGGTTAGCCATCGGAAAGCATTTCCGCTT 8372 29 93.1 0 .............C..............A | ========== ====== ====== ====== ============================= =============================== ================== 6 29 97.1 31 GTTCCCCGCCGCATAGGCGGCTTAGAAAC # Left flank : AGAGAAGTATTTTAGCCATTGGATGCGAGAAGTGAAAAATCTGGTGATTATTGAGCTGGGCGCAGGAACAGTTATTCCAACGGTGCGTAATTTTTCTCAAGGCTATAGCGAGCATTTTAAAGCGCCTTTAATTCGGATTAATCTTAATGAATATCAAACGAATAATGACAGACATCTTGGTCTGCCTTTAGGCGCAAAGGAATCTTTGCAATTTTTGAATAATCTTTTAGAGAATATAGCTAAATGTCTCTGACTCGCATACAACGTTAGCTCGTTTGCCATACTGAGGTTGGCTATCTGTGGTTCGTCAGTTCATATGCAAGCTAACCCCATTCAGCTATAATCCAAACAATCATTTTTGATCATAAAACCCTTTTTTCCCCGCTCTTTAACAACCGAATAAAAAACAAATACTTGCAACAAGCAAAAAAACAAAAGGTCAACCAACAAAAAACCTTTAAAACCCTTGTGGCAAGTGCATCAAATCGAATAAAATTCGA # Right flank : ACTTCGTTGTGCGAGCTGAATAAATCCTTTATGTTCATGCAGCTTTTCATAAGAGAGAAAGTACAAAAGAACACATTGAAAATGCAGGACATCAAATCCTTTGGTTACCAGCCTACAGTCTAGACTTAAATCCGATTGAGAAGAAGTGGGCAAAAGTGAAACATATTTGGCGATTATGGAAGATAGATTGTATTGATACTTTGTTTAAAGTCTGCATGCAATGTTAAGTTTTAACTATATAGCTGAATGAGTTTAGATTGCATACAAATCAACTAGCTACAGACAGCACACATTAGTACGGAAAGACGCTCAAATCCTGTATGCGAGTTAAAGACATTCAGCCATATATCTCATTTAGCAAAAAATTTTAGCTAATTCAAATCAGATAATCAAAAACCTTACTAAAGAAACCCTGATTAACTCGTAAACCAAAAATATTTTATTACTCAATCAAATCAGACAGATATTTTTGCCTTTCTACAGGAAAAGCGTTTAGTCAA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCCGCCGCATAGGCGGCTTAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.70,-9.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 127088-126878 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHIC01000001.1 Suttonella ornithocola strain NCTC13337, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 127087 29 100.0 31 ............................. CAGGGGCGACGGATGCTAATCAATCATGAAG 127027 29 96.6 31 ............................G TTCTGTCCTAGTGATTATCTATAAACATCTC 126967 29 100.0 31 ............................. GTGTAAGGAGTAGGACAAGGTCTATAACGAT 126907 29 100.0 0 ............................. | T [126884] ========== ====== ====== ====== ============================= =============================== ================== 4 29 99.2 31 GTTCCCCGCCGCATAGGCGGCTTAGAAAT # Left flank : CTTATAGCGGATTAAATAATTACCTACTATTTTACAACATTTGAATTCAGAACTATTTTAGGCATATATAGCCAACTTCCCAAAAAATGCATACAACGCATAACTTAAGTATACACTTTACAAACAGCATTCTATCTCTAAGTGCGGTATGCATTTTTTGGGAGCCCTGCTATAGTGCAATCAGCTAAAAAGTGAACTGTTTAAAAACCATACCAAGCAGCTCTAGTAGTAAATATAGCTAAATGTCTCTAACTTGCATGCAGCGTTAGCTCTTTTTGCCATACTGAGGTTGGCTGTTTGTGGTTCGTCAGTTCATATGCAAGCTAAACTCATTCAGCTATAATCCAAACAATCATTTTTGATCATAAAACCCTTTTTTAGCTGCTCTTTAACAACCGAATAAAAAACAAATACTTGCAAAAAGCAAAAAAACAAAAGGTCAACCAACAAAAAACCTTTAAAACCCTTGTGGCAAGTGCATCAAATCGAATAAAATTCGA # Right flank : AAACCAGCACCTGATGTAGTCACCATATATAGCAGCTGAATGTCTTTAATTCGCATACAGAATTTGAACGTCTTTCCGTACTAATGTGTGCTGTCTGTGGCTCGTTGATTTGTATGCAATCTGAACTTATTCAGCTATACCGTTCTGACTTTTAGCTGATTTAACGATCATTGCTAGAATAGTCAAACTAATAAATGTTATGCTATAACAATTTATTGGTTGGAAAATGCGATGTACAATGCCTTAATTACGCAAATCTCTCAATGGCCACCTACCGTTAAGCATGAAATCATCAATACTTATCAGCATTTTAAACGAGGATATCGTCCTAAAATAAGTGAATATCCCATAACGAAATATTGCGATTATTATATCCGAGCAGATGAAGAAGAAATTGTAGCTTGTTTTGGCTGCGAAACCTATCAACCAACCGAGCATCAAATTTTATGGAAAACATCTAGTATATCTTTGGCGCAATCATCAGCTACTTCGCTACAAAC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCCGCCGCATAGGCGGCTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1228196-1227867 **** Predicted by CRISPRDetect 2.4 *** >NZ_UHIC01000001.1 Suttonella ornithocola strain NCTC13337, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1228195 29 96.6 31 ............................A TATTGTTGTGGCTTTTCTTTTAATTCTATCA 1228135 29 96.6 31 ............................G ACTGTTGAGCCGTCAGGCAATACGGGTTCCA 1228075 29 100.0 31 ............................. AAGCAAGCCTGCGCATCTAAATACACCATGA 1228015 29 96.6 31 ............................T GCTTAGTGTCGGGCTATGGCTCAACCCCACC 1227955 29 100.0 31 ............................. AGAGGTTAGCCATCGGAAAGCATTTCCGCTT 1227895 29 93.1 0 .............C..............A | ========== ====== ====== ====== ============================= =============================== ================== 6 29 97.1 31 GTTCCCCGCCGCATAGGCGGCTTAGAAAC # Left flank : TATGTCGTCATTATGGCAGGTGGTCATAGCTCATTTGGCACCAAATTAGGTGATTCTCTGATTGCTTATGCTTTAGAGTAATTCTCTACTTTTCTCTCTGATAGCATTATGGCTATCAGAGCCTTTTCATTATAAAAAAGAACATCGCTTAAGCGATGTTCTTTTTTAGGCTTTGGGTACATTTATTAAAAATGATCATTTTTTCTATTCAATTTTGGTATTGTAATTTAAGAATATAGCTAAATGTCTCTCACTCGCATACAGCGTTAGCTCGTTTGCTATACTGAGGTTGGCTATCTGTGGTTCGTCAGTTCATATGCAAGCTAACCCCATTCAGCTATAATCCAAACAATCATTTTTGATCATAAAACCCTTTTTTCCCCGCTCTTTAACAACCGAATAAAAAACAAATACTTGCAACAAGCAAAAAAACAAAAGGTCAACCAACAAAAAACCTTTAAAACCCTTGTGGCAAGTGCATCAAATCGAATAAAATTCGA # Right flank : CTTCGTTGTGCGAGCTGAATAAATCCTTTATGTTCATGCAGCTTTTCATAAGAGAGAAAGTACAAAAGAACACATTGAAAATGCAGGACATCAAATCCTTTGGTTACCAGCCTACAGTCTAGACTTAAATCCGATTGAGAAGAAGTGGGCAAAAGTGAAACATATTTGGCGATTATGGAAGATAGATTGTATTGATACTTTGTTTAAAGTCTGCATGCAATGTTAAGTTTTAACTATATAGCTGAATGAGTTTAGATTGCATACAAATCAACTAGCTACAGACAGCACACATTAGTACGGAAAGACGCTCAAATCCTGTATGCGAGTTAAAGACATTCAGCCATATATCTCATTTAGCAAAAAATTTTAGCTAATTCAAATCAGATAATCAAAAACCTTACTAAAGAAACCCTGATTAACTCGTAAACCAAAAATATTTTATTACTCAATCAAATCAGACAGATATTTTTGCCTTTCTACAGGAAAAGCGTTTAGTCAAT # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCCGCCGCATAGGCGGCTTAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //