Array 1 743761-743129 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQKV01000001.1 Neisseria lactamica strain M37132 M37132_HUY4067A182_cleaned_ctg_6207, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 743760 32 100.0 35 ................................ AAGGGCTTCCTACAACAGCAAGAGGATTAAGGGAG 743693 32 100.0 33 ................................ CCTTTTAAATCCTAAAAGCCCGCGTTGTCCTTT 743628 32 100.0 33 ................................ ACAAGCGGAATCGCACCGTTATTGCGATATTTT 743563 32 100.0 34 ................................ AAGCTGAACAATCTGTACGTGTTGAGTTTCAGAA 743497 32 100.0 35 ................................ TTTTAATTCTTCCATTTCAAGCTCCTATCTGGTCG 743430 32 100.0 35 ................................ CTGTCCGTGGCGTAAGAACCACTACATAGGCGGCA 743363 32 100.0 39 ................................ AACACGAAATTGCGCGGGCAAATTGGAAGAACATTGTTC 743292 32 100.0 35 ................................ TGAAACTGCGAAGCCAACCCCCCTTACTAACAGGG 743225 32 96.9 33 ........A....................... AAGGCAGAAATTGATTTTGATTTCGTCACCAAC 743160 32 93.8 0 ............G.......A........... | ========== ====== ====== ====== ================================ ======================================= ================== 10 32 99.1 35 TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC # Left flank : CATGGAGGGACAAGAAAATGCTGATGTTGATAACTTATGATATTTCGTTGGAAAATGCCGAAGGGCAGGCAAGGCTGCGGCGCGTAGCGAAACTGTGCCAAGACTACGGCGTGCGCGTGCAGTATTCCGTGTTCGAATGCGACATCGCACCCGACCAATGGGTAGTTTTAAAAGACAAACTTTTAAAAACCTACAACCCCGAAACAGACAGCCTGCGCTTTTACCACCTGGGCAGCAAATGGCGGCGCAAAGTGGAGCATCACGGCGCAAAACCGGCGGTCGATATATTTAAGGACACGCTGATTGTGTGAATCGCCAACCTGTTGTTCCCATAAAAATGCGGCAGGGTTGGCGAATCTGGGTTGTTCTTTAACAATCAGGATATTGCAAATGTGGATATGGCGGATAAGGCTGTGCTATACTCATGTTTGTGCTTTTTTCGGGAGTTTGGCGAAGTCGGGGCTGCGAAGCCTGATGTAGTAAGGCTTTCGGAAGAGGCT # Right flank : GGCGCGGACGACATCCGTTTCCTGCGCGAGTAGGGTAAAGGACAATCTAAATTCCCCCCGCAGCTTAAAATCTTGCCGGGTCTGCACAAAAATGCCGTCTGAACAGGTTTCAGACGGCATTTTGTTTCAATCGGGAATATCTTTGTTAAAAACGGGTTGATATTATCTGCACAACATATTAATATAACGATAATTATTATTAATTTAAATAGAGAAAAAGTAGAAATGCGTAAACTGAATTATTTCAGCATTGCCTTGCTGCCGTTGATGCTGGCAGCCTGCGGCGGCAATTTCGGCGTGCAGCCTGTTGCCAAACCAACGCCGACCGTACAAACCCCGTCAGATTCCAAACCGTCCAAACCTGAGGACGTTCCCACTCCACCCCCTGCCAAACCTTCTACAGAAACCACGCCGGTCAATCAACCCGCCGTCGGTGCGGCAATGCGGCTGTTGAGACGGAATACTGCTTTTCATCGTGAAGATGGCACGGAAATTCCCGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCAGCCGCCTCTAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //