Array 1 323152-323359 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRTP010000002.1 Klebsiella oxytoca strain KLO00028 KLO00028_c0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 323152 28 100.0 32 ............................ ATCCCCACGGAGGCCAGCGCCTCCCGGCTGTT 323212 28 100.0 32 ............................ CATCATGGCATCCCAGGCGCCGCTGGCAGCAT 323272 28 100.0 32 ............................ GGATGACCGATCGCATCGGCATTTTTGAATTG 323332 28 82.1 0 ............T.C.....T.C..T.. | ========== ====== ====== ====== ============================ ================================ ================== 4 28 95.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CATCAGCAGCATGCTGGTGGCGAAAGGTCTGCCGGGCTTTATCGCTTATGGGGTTTTAGCTGGAGAAGTGGTTGCACCATGTCTGCTGATTGTGGGGATCCTGACGCGCCCTGCGGCGCTGGTGCTGGCATTCACGATGGTTGTGGCCTGGCTGATGGTCGGGACGGGTAAAACCTTCGCGCTGGATGCGGTAGGCGCGTGGGCGATTGAGAGTCTGGTCTACTTCTTTGTTGGCGCGCTGGCGATTGCCTTCCTCGGGGCAGGCCGATATTCCATTGGCGGAAACTCGGCCTGGCGGTAAGTGCACCAGGATTTTCTGCCTCACCCTGGCCACATCCTGTTTGCCGGGGTGTCGCCGCTCGTTTTTCAGACCCTTTTTTGGGGAGGGTATTTTAAGATCTTGATTTTTTAATATTTTTATTGTTGTCACAAAAAAAGGGTAAAAGGGCCTTTTATTGATTATTGCATGATAAAACACTAAGGCAGGTGCGCGGGCTAGT # Right flank : AGAGCCATGCTACCCGACGATTACCGCGTAGCATGGCCAGCAACAACATTAAGCCAGTACCAAATCTCCCTGCGGCTGGCAGGAGCAGGCCAGCACGTAGCCTTCAGCGATTTCCGCATCGGTTAACGTCATGGTGCTGCTGACGGTATATTCACCGGAAACCACTTTCGTTTTGCAGCAGCCGCAAACGCCCGCGCGGCAGGCGACGGTAACCGGCACCTTATTGCTTTCCAGCGCTTCGAGCAGCGTGGTGCCGACCGGGGCATAAAACGTTTTCGCCGGCTGCAGTTTGGTGAACTTCAGACCGCTGGTGGCCGCGACGGCGACTGGCGTAAAGAACTGCTCTTTAAAGAAGCGCGTCGCGCCCAGCGCTTTCACTTCCTGCTCGACGAGATCCATATACGGCGCCGGACCGCAGGTCATCACGGTGCGCGATGCCAGATCCGGCACGCTTTGCAGTAGTTCAGTCGTTAAACGTCCTGCCACGAAACCGTGGGTAG # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 336619-338508 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRTP010000002.1 Klebsiella oxytoca strain KLO00028 KLO00028_c0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 336619 28 100.0 32 ............................ ACGTAATGAGCGCTCTGGCGGAAATGGAAAGA 336679 28 100.0 32 ............................ TACAAAAATTCCTTATAATCCGTCTACTAATG 336739 28 100.0 32 ............................ GAATTAACAAGAAGTTTATGGACGCGAGCCTA 336799 28 100.0 32 ............................ TTTAATGTTAAAGCGCTTGCTGTTGCATAGCT 336859 28 100.0 32 ............................ ATTTCACAATTAGGCGGTAATTCAATTTCTAG 336919 28 100.0 32 ............................ ATTCGGTGACCGCGTTTCGGAATCGTTGTCAG 336979 28 100.0 32 ............................ CCGACCGCGCCCAGCATGCCGCCGCCCTGATA 337039 28 100.0 32 ............................ TCATAAAAAAGGCCCGCATTTGCGAGCCTGTT 337099 28 100.0 32 ............................ GGAAAATATGACGGTATAGGTTTTGTATTAAC 337159 28 100.0 32 ............................ ACGTACATTACAAAACAGGGCGGCGTGATGAC 337219 28 100.0 32 ............................ ACGTACATTACAAAACAGGGCGGCGTGATGAC 337279 28 100.0 32 ............................ GTAATGCGCCGGCGGTCGCGCTTGCGCATAAA 337339 28 100.0 32 ............................ GATGCTATAGCCGCAATGAATACCGGAAAATA 337399 28 100.0 32 ............................ TTTAATAATGATGTGTAGGCCATTACCAGAAG 337459 28 100.0 32 ............................ GTAACCGCATGTCGGCTTTTGCTGCATGGTGG 337519 28 100.0 32 ............................ TTCGGCCATACCGCGATACGACGCTTAACCAG 337579 28 100.0 33 ............................ TCGACGCGCTGGCCTCGCTGCTGATTTCTACGA 337640 28 100.0 32 ............................ TACCGGACAACGATCACCCATTGTCATGTAAC 337700 28 100.0 32 ............................ AATTACGACAGGGACGATACGAATTACTTCAC 337760 28 100.0 32 ............................ TGTAATGGCATCGGGAGGCTGTCATGTGGATA 337820 28 100.0 32 ............................ GGCTGCGTCGGGACCCACCACATCGCCAGCAG 337880 28 96.4 32 ........T................... CCTGGCCCCGGCAGTATCTATGATGGTCAGGG 337940 28 100.0 32 ............................ GGAAGAAATCACCGCCATGCTTACCGCAGGAG 338000 28 100.0 32 ............................ GGCAACTGGCAGAATACGCTGACCGGGCAGCA 338060 28 100.0 32 ............................ ATGCACCGGTAGAAGAACGCTGATCAATTGCC 338120 28 100.0 33 ............................ TGCGGCTGCACGACCAGCGTCAGGGAAATCACT 338181 28 100.0 32 ............................ CTCTTCGCGTCTGCGATACCGGAAACGGAGAC 338241 28 100.0 32 ............................ ATGCACCGGAAGAAGAACGCTGATCAATTGCC 338301 28 100.0 32 ............................ GTAAAGACGCTACCAGGCACATCGCTGAATAA 338361 28 96.4 32 ............G............... TCGACATCGCCGAGAGCGGCGTAGCCGTATAG 338421 28 92.9 32 ............G.......A....... TGCCCGCCGAGCCGGAAAGCGACAGCGGTAAA 338481 28 92.9 0 ....T.C..................... | ========== ====== ====== ====== ============================ ================================= ================== 32 28 99.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTTATCCACCAGGTGGTGGATAAGTTTATCGTTGAGCTGCAGGTCCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTAAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCGATGGCGAGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCTAACGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGTCAGGTGATCGTTGAGCTGGACAAAGAGAAAAACGCGCTGACCTATGCCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCGGCACATTAAGTCGCTTGCGTGAAACGTCAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCGATGTCCTGGACCCTTTTTTATTCCCCTTTTTTAAGCTATTGATTTTATTAAAGAGAAAATCTGGCGTGAAATTATGGTAGCAGAGAGGGGCTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTCGTTCGTTCA # Right flank : AAGAGCTTGCCCATACTGCGGTGCAGGCTAAAACGATTCTAAAGAATTTGCCAAAATAATAGGCTATTTTGCAATTTGCGATGAATGTCAACGTATTACCTCTAATATACTGTTTTTATAAACAGCTATCGACACTGAGCCACAGGATGTGACTATGCCCGCGAACTATATTGCCCCGTCGGATTTAAAAACGATTCTCCATTCGAAGCGCGCCAATATTTATTATCTGGAAAAGTGTCGGGTTCAGGTCAACGGCGGCCGCGTGGAATATGTTACGAGCGAGGGAAAAGAGTCATTTTACTGGAATATCCCAATAGCAAATACAACGGCTATTATGTTGGGAATGGGAACCTCCGTTAGCCAGGCTGCAATGCGTGAGTTTGCCCGAGCGGGCGTAATGGTCGGTTTTTGCGGTACGGATGGCACGCCTCTTTATGCCGCTAATGAAGTCGATATTGACGTTTCCTGGCTGTCCCCGCAAAGCGAATATCGACCAACTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 346937-347504 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRTP010000002.1 Klebsiella oxytoca strain KLO00028 KLO00028_c0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 346937 28 100.0 32 ............................ TTATGATTTTTCAGGTATTCATTCAGCTTTCC 346997 28 100.0 32 ............................ TCGCCCCGCAGCGCCAGCCGTGCGGCCAGTAC 347057 28 100.0 32 ............................ GGAAGAGGAAGCCGGTTCCGTGCTGTCTACTG 347117 28 100.0 32 ............................ CGATTAACACCAAAATTTAATTGGTAATTAAA 347177 28 100.0 32 ............................ ATACTTTCCGGCGGCATGCTGCCCGGGTGCCA 347237 28 100.0 32 ............................ AGAATTCTGGTTATGAAGTAATCGGTGATTAC 347297 28 100.0 32 ............................ TCAAGCGGCGGGACCGGGCTGTAGCTGTAGCG 347357 28 100.0 32 ............................ TGGATATTCGCATCGCCAGAAAGATAATAAGC 347417 28 100.0 32 ............................ AACGGTGACGATACTCAAACTCTCTCACTCAC 347477 28 92.9 0 .........................TG. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TACAAGGATGGCGTTGCGTCAGTCGGGTACAGGTAAAAAGCAGCCCCGAGCGGCTGATGCGCCGCTCGGTAAGAAAAGGCTGGCTGACGCAGGATGAAGCAAATGAGCGATTGCTTAGCATGCGGGGAGAGTCAACAGCGCTCCCCTGGTTGAATATGAAAAGCCTCTCCAATGGGCAGAAGTTTCCGCTATTTATTTGTCACGGTGAGCTGCTGGCGCAGCGCGTCGCGGGAACATTCAATAGCTATGGGCTGAGCCATATCGCGACTATCCCCTGGTTTTAGCATGTTGGTGAGAGTTTTTGACGAGTGCTAAAACAAACCATAACCGGCGCGGTCTTTCGCGCCGATTTTTCAATCGCTAATTAAAACCCTTTTTTATGATGAATCTCTATCTTATTGATTTTAGATAGTGATTTTATAAAAGTCGGAAAAAGGGTTGTGAAGAGGGGAAGGCGTTTTTTGGCTTTTTTATCAGATGGTTGTAGTGGTTAGGCTTCA # Right flank : ATCGTGGCGATTACGGGCGCAGAGACAGGGCCGTCAAAGCCGAAGAGGGAAGCGGCGTGAGAATAAAAGAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGTTAAGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATTGCCCGTAATTCACGCGGATAAACCGGGCGACAGGCGCAAACG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 94683-93935 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRTP010000016.1 Klebsiella oxytoca strain KLO00028 KLO00028_c0016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================================================================================================================================================================================== ================== 94682 29 100.0 32 ............................. GAACTGACCATCATAGACGAACTCGCCAATAG 94621 29 100.0 32 ............................. GTCTGAATGCTGAAAAAATTTATGAATATGTT 94560 29 96.6 32 ............................A AATTCGATACAAACAGCAATCAGGTCATCTGC 94499 29 100.0 33 ............................. CGCACACCGAAAAAGCACCGCGCCCGTGCTAAT 94437 29 82.8 32 ..T........CT...GC........... AGAGCTTGGCGGAGTCATTGTTGATGGTTTAT 94376 27 93.1 32 ................--........... TTCCTGTTTGGTTTCTCGATTATTTCCACCTT 94317 27 86.2 32 ............T...--........T.. CTTGTCCGCAATCCGGCGTTTCATCGCCGTTA 94258 29 86.2 207 ..........G..T.A.A........... GGCATGTGGCTTTCTACGAAAGAACGGAATCGAGTTTCCCCTGTGCGGGGTTATCGGCGCCCCAGTTCCTGACAGACTATCTCAAGAACGTATTTCCCCTGCGTGGGGGTTATCGGGGATGGATGTCCTGCGAAATTACAGCGTGACCGTGTTTCCCCTGCATGGGGGTTATTGGCGTATTCGAGGGGGCGATATTACCCGGCCCAT T [94231] 94021 29 93.1 28 ..............C..........A... TCTACTTCGAGCTTATCACAGGTATTGC 93964 29 75.9 0 C..A........AA.T........GC... | C [93954] ========== ====== ====== ====== ============================= =============================================================================================================================================================================================================== ================== 10 29 91.4 51 GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Left flank : TAAAGACACAAAGGCGGATTTGCAGAAAAAAGTTAACGAACTGGATGAAAAAATTCAGTCTCGTAAGGATGAAAAATCCGAAGCCCGTGAGTCCATTCGTCGTCCTATTGACCCCTATGAAGCATTCATTGCCGGGGCTGAACTGAATCACCGAATGAGCATTAAAAATGCCACTGACGAAGAAGCTGGCCTGTTTATTTCTGCGCTTGTTCGTTTCGCTTCTGAACCGCGTCTCGGCGGTCATGCGAATCACAACTGCGGGCTGGTGGAAGCAAACTGGAGCGTCACGACATGGAAGCCGGGTGAACTCACGCCAGTCACCCTCGGCGAGATCAGTATTAGCCCTAGCGGTGTACAAATCGAAGGTGAAGAGCTGTCCGCTATGGTCGCTGCTTTTGCAGAGGCAGATGGATTTGATTTTAAAGCCCGGTGATGCATAATTTCTCGGTAGGAAAAATATGAACTATTTTTCCTTTTTATATCAAAGCAATATAATTAGA # Right flank : GCTATAGAGCGAGAGCCGATTTTTACTGATCTAGGATTTTCCCTTCTTCGCGGGGTTAACGATGTTGTGGGCGAAGGAATATGCCATCAATAGCATTCCCCTTCTGGGGGTTAACGGGCCGTAAGAAATGCAAGTATTGATACATCCCCTTTTTTGGGGTAAGCGCATGGTAAAAATGAATAGGATTTTTTAGCGAGAAAATCAGAATAGGATTTAGCAAAACAGTTTTATTGCTACAAATACCCTTGTTGGTTAAAATACATACTGTATAAACCAACAGGGGTATCCGTCATGGATTTAAGAAAGACATTTGAACAACTTACCGACGAACTGCTTGCGCTGAAAAAGTTGATCAGCGAAAGCTCGCCGTTGTTTGCTCGTGTCTCGGTAATTCCCCCGGTTTTGCGCGGCGCGGAGAATGAGCCTGTTAATGAGATTGTTCCCATTCAGTTGTACGGGCGGGAGGCAATGATTAAGGCTGTAGATACGTGGCTTGACCT # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 134347-134017 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRTP010000016.1 Klebsiella oxytoca strain KLO00028 KLO00028_c0016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 134346 29 96.6 32 .......T..................... TTTTTGTCCCATATTTCGAACTCAGCGACAGG 134285 29 96.6 28 ............................T CAATACGGGTGTGAATTCCTGAACGATA 134228 29 100.0 32 ............................. GCTGGCGAACGCTCAAGGCTGGTGGAGTGAAC 134167 29 100.0 32 ............................. TATCAATAGCCCATTGATTTTCCTGACTGCTG 134106 29 96.6 32 .............C............... TACTGATACTAAAACGGGATTTTCGTTGTTTC 134045 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 31 GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Left flank : GGGGGGCGGCGATCAGGTTTTTACTCAAAATGGGTTTTACGGTCGGCCTTGTAGGGTATCCCGCTGTAGGTAAGTCATACCTGCTCGCCCGGACACTGCCAGAAGGTATTATTGACGGTCGAGAGCTGGTGGAGAAGAACAACTGGGAAACGCCGGTGCCATTCCCTTCCGACAAGATCCCGTCCGGGCCTGTAGGCCTTGATGAAGGAAATGTGTTCGGGAGTCAGGCTTTGTTATCGGTAGCGGCGACCCTGAAAAAATGCGGTGTCGTGTTTACTGCTCAACGTCTGAAAAATGCAGAGAGCCTCGCGGCAAGTTTAATGGCGCGGCATGTGCTGATTTTTTATATCGGTGAGTATGAGTCTTTTAAGTTTGAAGTTGCGGCACAGTATGATCGGCGCAGGAAATCCTGAACCTGCGGAGGTGATTTTTACGCCTCAGAATCTGGTGGAAAATGAATGAATAGAATTTGCATTTGTAATCAATAGTATATAGTTAGA # Right flank : GGCTATATCGAACGCGTTAATGGGAAGTGATTTTCAGGGAAAAACATTCGCTCGCAAAATTCCTATAGCAAAAAACGGTTCGCCGGTTTTTTTTGTGCCTGCGGTATTCGGCCTCTCTTTTGCGGCAGGGATAATACATCCCTGCGAAACTACTTAAAGAAGGTGACGATAATGACTCAGGTTCAGAAAGGTAAAACGGTTCCCGTTCGGCCACCAGCGACGTATTTCAGCTATAGCCCCGACGACGGGTATGAGGAGCATGACTCCCCGGAGAAGGCAAAAGCAGCGGCAGACGCTGCGATTGATGCTTATCGAGGTGAAGCATGTGATGGCTGGTCTGATGAAGTGACCAGCGTTACGTGGGGTGTGGTGGCACAACGAGCGGCAAAGTTTGGCGAGCGTAAGCGCACCAATGAAGACGCGCATCTTTCTCCAGAAATTCAAACGGTCTGTGACTACTATCTTGCGCCGGAAGTGACCGTACCAGCCTCACTCCCCTT # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTTCCCCTGCGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //