Array 1 62981-60834 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFV010000011.1 Leuconostoc gelidum subsp. gelidum strain C220d NODE_6_length_70926_cov_41.691299, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 62980 36 100.0 30 .................................... CAAAACCCATTTTGCCATCCAATTTGTATA 62914 36 100.0 30 .................................... CCCAAAAGAAAAACAAACGGAGTTATTGGC 62848 36 100.0 30 .................................... ACGTTTCTCGGTACTCGTTACGTTTATTTT 62782 36 100.0 30 .................................... CTCTCTATTACGATATATGATTCACCTTTA 62716 36 100.0 30 .................................... ATGAACATGTGACATTCAGAATAGAAGAGG 62650 36 100.0 30 .................................... TATAGGCTTCAATACGTTGGTAGGCACGGT 62584 36 100.0 30 .................................... AACAAATAAACATTGCAGGGTTAGGCATGC 62518 36 100.0 30 .................................... TAAGATTGTCAACACTACCGCCAACACATA 62452 36 100.0 30 .................................... CATATTTTATCGTGTCAGAATACATCCCCT 62386 36 100.0 30 .................................... TTATATACAAGGCTATACGACATAGATGAT 62320 36 100.0 30 .................................... CTTGAACTGAATCCCAACCATACTTCTTGA 62254 36 100.0 30 .................................... TAAAGTAGAAATGCATGATGTGTTTATTGA 62188 36 100.0 30 .................................... GAGCTTTTCATGACATCGCCAGACAATACG 62122 36 100.0 30 .................................... GGTAGATGCAGGTGTTTATCAATCCGTGGG 62056 36 100.0 30 .................................... CACCAAACGTTGGTATCAGTCAAAATTGTT 61990 36 100.0 30 .................................... ACTAGACGATGACTTTGTTCCAGCTGAATT 61924 36 100.0 30 .................................... GTTAGGATACATTTTAACCAAGTATCCTGT 61858 36 100.0 30 .................................... GCGATTTGAAAGATGTTGCCGTCAATCCGT 61792 36 100.0 30 .................................... CAGATAGGCGGCATTGCTAAACTATTTGTA 61726 36 100.0 30 .................................... ATTGAGGAGAAAAATAATGAACAAGAAATT 61660 36 100.0 30 .................................... GATAAGGTAGCTGCTAAGCAAGCAGAAGTC 61594 36 100.0 30 .................................... ACCGTCCATGTACGCCTTACTGTTAACAAA 61528 36 100.0 30 .................................... AATAATACTGAACACTATCGCCTGACTTAA 61462 36 100.0 30 .................................... GACCAATTGGTTTAACCGGTGCTACAGGAC 61396 36 100.0 30 .................................... GCGTTGTCTGAATGCCCTTGTCAACCCATT 61330 36 100.0 30 .................................... GGTCGATAAAACGATCGAAGAAGCGCTTGA 61264 36 100.0 30 .................................... AATAATTTTTTTAGTAATCCTGTCTGCTTG 61198 36 100.0 30 .................................... TGTTCCGCGTTGGAATTACATTGGCGACGC 61132 36 100.0 30 .................................... GTTCATCTTGTTTAATACGTACTATTATTT 61066 36 100.0 30 .................................... ATCAGACTCAGGTAACAGATTATATACAGG 61000 36 100.0 30 .................................... TACACAATTTAATGCAAAGCCATTGCTCAG 60934 36 94.4 30 ...........................A.......T GTATCGGGAACAGGATATCAGATCTTGAAG 60868 35 77.8 0 .............AC..T..T...A..A..-...G. | ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.2 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCTGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAATAATTTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAAGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAACCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : GCTTAGGCGCTTTTTATATGCCATGTATGTCAAAAAAAGGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCGAGTGAAAGAACTACTAGTTTCAACAATAATTATTGGTGGCGTTATGGGCACCATGTCTACGGTTAATGCTGCTGAAAATACAGCGCATGTATCGACACAAGTGCCAAGTACAATAACATCAGGTTCGAGTGGTACATCACAAGCGCCAAGCACTAAGACATCAAGTTCAACCATAAATGAGTCGAGACAAAATGATAATTATAATGTGACGCCGTCAACAAGGTCTATTCAAGTACATCAAGCGAAATTTAAAACCGGTTCTGTAATTGTATTGACCACTTCAGCAAAAACATCCAGTGGTACACAACTTCAAAAGTATGGTAATCAATCAGGTGTTGTGACGAATGTCATAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //