Array 1 599671-598066 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPWE01000001.1 Bifidobacterium sp. S053-2 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================= ================== 599670 29 100.0 32 ............................. CTGCGGACGTTCGGATACATGCCGTTCGACCC 599609 29 100.0 32 ............................. ACTGGGAACTCGGGCCAAGGGAGAAAGCATGA 599548 29 96.6 32 ............................T GCGAAACGAACCTACCTGGACATGTCACGATG 599487 29 100.0 32 ............................. GTGACGCCCTTGGAGGTCACTCTCATGACCGA 599426 29 96.6 32 ............................T GTGAGCTTCAACCTCGTCTCCTTTGCTATGAT 599365 29 96.6 32 ............................T CTCAGTAGGTATACATGCTACCAATTCCGTCG 599304 29 96.6 32 ............................G GCGAGGTTGGCCAGGCTGGATGCGCCGCCCTG 599243 29 96.6 32 ............................G TCCCACGGGTGGGCGACATATGGGAGTTTTAT 599182 29 96.6 32 ............................G TATGGCCTATATCCCTGATGATGTCTCCCAGA 599121 29 100.0 32 ............................. TAAGGGTGCTCCAGACAATCCCGACGAGGCTG 599060 29 100.0 32 ............................. GAGAGAGCAAGGGAAGAACGATGAAGGATATT 598999 29 96.6 32 ............................T TCACCTGTGTCTGTGGGTTGGTCTTCCAGTCG 598938 29 100.0 33 ............................. CTGCTTCCTGGTCCGCACCTTGTTCTCGTTCAT 598876 29 96.6 32 ............................T CGGATGTGCAGTATCGGCTTATGAAGCGCCTT 598815 29 93.1 32 ........................G...T TCCAGCAGATCGCTTCCAATAACAAATGGACC 598754 29 100.0 32 ............................. GGCGTAGACTCGTTCCTGCGGTACATGTATCC 598693 29 96.6 32 ............................T GTTCATGACAACCTCCTTGTTGTCAATGCCTC 598632 29 96.6 32 ..............T.............. AAGCTGTCTCCCAATGACACGGAGCTGACCCT 598571 29 96.6 32 ..............T.............. CGGATCAACGCCCAGGACAAGCCAGACAAGCA 598510 29 93.1 32 ..............T.............T CGTTGTAGATGCGCACCGTGATATCGGTGTCG 598449 29 93.1 32 ..............T.............G GCCGGATGCCGTCCCGGAGGCGTGGTCCTGGA 598388 29 96.6 48 ..............T.............. AGCGTGGGCGCACTGATTGAAGGGGCGATACAGCTAGTCAACGCACTG 598311 29 93.1 32 ...............T............T TCACCTGTGTCTGTGGGTTGGTCTTCCAGTCG 598250 29 100.0 32 ............................. TTGCCGTCGGACCAATCCTCTGGCTTGCCGAG 598189 29 89.7 65 ........T.................T.T ACAGGCGGCTTGCAGGGCATCGGGGATGATCCTGACGGAGAAGTTGCTGCTCGACCACATCGAGC 598095 29 82.8 0 ...T...........T.....C.....TT | C [598085] ========== ====== ====== ====== ============================= ================================================================= ================== 26 29 96.3 34 GTGCTCCCCGCATCCGCGGGGATGATCCC # Left flank : GCCACGTCACCGCTAGGGTCCGGGACCGGCTTTGGGAACGCATCACAGGGCAAATCCGAACCGGCAAGGCCATTATGGTCTATTCCGCCCGCAATGAGCAGCATCTGAGTTTCAAGGTGCATCGCTCGGATTGGAACCCCGTAGACTGTGAGGGATTGGCTCTTATGGAGAAGCCTGCTGATGGTGGCGATGGCAGATCCGCAGGTGGTGGAAACCGATACCGTCGGACTGGTTGGAGCAATGCCAGCAAGTACAGACGTGCGGCAAGGTTCCGTCGCTCGCGCTCCAGCTGAGCGCAACCGGACTTGTGTACTTTTCAAACGAGCTTTACCGATGAGTGCTGAGCACTGATTACTGGGTGAGTGCATGGCTAAGGAGCTCAGTGTAGATGGTTTGAATTGCAGCGGCTGAGACGGGAATAGAGAGGGCTCGAAATGCAAACTCATTAAAAAATAGAGATCTTGTCTATTATATTGTTGGGATTGCAAGGATTTCTAAGT # Right flank : AAAGGACATCTAATGGATGTCCTCAGGTTCACCAATATGAGAGGAGGCGATCAGAAAATACTTGAGGATTTCATGAGAGAAAGGGCATCCAGGGATTGTGCCTGTACCTGTCATGACAACATTCATGAGGATCTGATCGATGGCTATCCGTCGAGACATCCCCTCATCGAGAAATGGGTGAAACCGAACGCCTGGTCTGGGATTCGCTGGATGATGCGGACAGGAGAATGATCCAATAGGATCGCATATACTACGGTACAGGTTGCGGCGGCGGCAAAGCAGAGGTGAATTTCTATGGAGTTATCGGTATAAGGCGATTCGACTAGTTCATTCCCGGGCTCCGACATACTGTTTCAATCAGTAAAAGAATCACTATTAGGAGTGTCGGCGAAGAATCCATAACCACTTCATGGTTTGAACATGAGTATGGTTTGAAGAGGATTGTTTGATTCTCTGGAGATGATCCGGCTGTCTACTCGGCCAGGGACGAGAATGCTGTG # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.06, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCATCCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //