Array 1 153579-155462 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCZU01000035.1 Streptococcus agalactiae strain 446329 ctg7180000002983, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 153579 36 100.0 30 .................................... TCCGATGTTAGCAAGTGAAGAATTCGAACG 153645 36 100.0 30 .................................... AAAAGAACCACAAGCGAAAGATATGGTGGT 153711 36 100.0 30 .................................... AAAAAGACATAAGACTTTGTTAAACCATCA 153777 36 100.0 30 .................................... TATGTTCTGAGTTACCTTTCTCGACACGCG 153843 36 100.0 30 .................................... AGCATCAAGGCTCTTATCTGCAGATTGTTA 153909 36 100.0 30 .................................... TAAAAGATTAACTAACATCATTGTTTATTA 153975 36 100.0 30 .................................... AATAACATTTATATGTGTTTCATTAATCGT 154041 36 100.0 30 .................................... AATAACATTTATATGTGTTTCATTAATCGT 154107 36 100.0 30 .................................... ACTGTTTAATTTTCTTTTGAGCAGCTTCAA 154173 36 100.0 30 .................................... ATACTGACTTTGAGCAAGACTCCCTACACT 154239 36 100.0 30 .................................... ATACTCAAAAAGCAGACTTTTATAAATTAT 154305 36 100.0 30 .................................... ACTCTTCCTTGATCATAGCCTCATCAGCTA 154371 36 100.0 30 .................................... CGCTCGATTGATGCTATCAACTATATTGAA 154437 36 100.0 30 .................................... TTCTTCAAGAGAACTTGTAGAACAGCTTCA 154503 36 100.0 30 .................................... AAGGTACTTTTAGCTTGTTCTTGTGGTGTT 154569 36 100.0 30 .................................... ACAGCTACTGTAAATTCTGCTTTTACGGTT 154635 36 100.0 30 .................................... TAGTGCAGTTGTCAAGGAGATTGTGAGCGA 154701 36 100.0 30 .................................... TTTAACCTTTGAAAATGTGAAAGGCTCGTA 154767 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 154833 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 154899 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 154965 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 155031 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 155097 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 155163 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 155230 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 155296 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 155361 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 155427 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //