Array 1 1072259-1075435 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP075961.1 Clostridium perfringens strain 497/86 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 1072259 29 100.0 36 ............................. GTCTTATATTGTAAAGATCGAAGAAGGAAATAAAAA 1072324 29 100.0 37 ............................. GTAATTAAAACTGATCTTTTAAAATTAAGCATAAAAA 1072390 29 100.0 37 ............................. TTGATAAGATAGGTTCTACTATTAAAGATGCAGGACA 1072456 29 100.0 36 ............................. ACGACTATCGAAAGGATATCTATAAAATAGTATTTA 1072521 29 100.0 36 ............................. TATCTACTATTAAATTAAATCTATTTGAACTAAGAA 1072586 29 100.0 39 ............................. ATGTGTGGTGGAGTTCTAAAGATGTTAATATAAAAGAGT 1072654 29 100.0 36 ............................. CTTTGTATCACTCCCATATATTGTAATTTATTTACT 1072719 29 100.0 37 ............................. TCTTAATGGGGAAGGAGAAAATGAGATGGTTGAATTA 1072785 29 100.0 36 ............................. CGTGGGTATAATTGCAATAGTTTTTAAAAAGTTTTT 1072850 29 100.0 36 ............................. ACTGAGGGAGCTTATTAATTTCCGCTACGAGAATTT 1072915 29 100.0 36 ............................. GGTTGACGATAAAATAAATTATTTACTTGGTAGACC 1072980 29 100.0 37 ............................. TAGAATAGAATTTAAATAAAGCTTTGTTATTTTCCTC 1073046 29 100.0 48 ............................. TGGGATAAACCAGTTGATAAACCAGTTGATAAACCAGTTGATAAACCA 1073123 29 100.0 37 ............................. AGCTATGATTTATTAATTAGGATTTCTAATGTTTTAG 1073189 29 100.0 37 ............................. ATATTTAAAGCGAAATGTTATTATAGTAGTATAAAGA 1073255 29 100.0 36 ............................. TAAATTTATTGTTATTTATAGTAATAATTATTTCTC 1073320 29 100.0 36 ............................. ATAGAAGAAATACAAGTGTACATACCATCAGTAATA 1073385 29 96.6 37 ................A............ CAAAATAAGACAAATTAAGAATGCAGCTATGCTAGAA 1073451 29 100.0 36 ............................. ATACTTGTTGTTGTAGCAACTTCACCCCTTAAAATT 1073516 29 100.0 37 ............................. CCACCAATTCCAAAGTTATTAGGATCAAGTATTATTT 1073582 29 100.0 37 ............................. TCTCAAAAGAATTGTCCATGTTAGTTATTAATACAGT 1073648 29 100.0 37 ............................. TCTAAAGAATATTGCCATCCCCTACAAGTAAAGTTAA 1073714 29 100.0 36 ............................. TTATCACCTTTTGCTTTCCCCAACCCAAATCATTTG 1073779 29 100.0 36 ............................. AGAAATAACGTAGCTTTAAGTGGAAGTTTCTACAAT 1073844 29 100.0 36 ............................. AGAAAAAAATATTCTTTTATACAAACAGATGATATA 1073909 29 100.0 37 ............................. CAAAATGAGCACTCTCAAAATGAACCGTCTCAAAATG 1073975 29 100.0 36 ............................. TGTTATAGAGAATACGGTTGATGGTATGACAACTGA 1074040 29 100.0 35 ............................. TTATGTAACTAAGATTACAACTTTTATGAAATGGT 1074104 29 100.0 36 ............................. TAAGGAATTCCCTTTTATGGTTGCTAACATAGATAG 1074169 29 100.0 36 ............................. CTTCAAAAATTCAAATATTTTCAAAATTAACACCTC 1074234 29 100.0 36 ............................. GCGCAAATAATAACATCTAAGGAAGCTTATATGAAA 1074299 29 100.0 35 ............................. CAAGTTTCTTGTATTATTAATTACAATTAGATATT 1074363 29 100.0 35 ............................. TTAGTTATACTGGTAATTATCTTACTTGCAACCTC 1074427 29 100.0 36 ............................. TATAATAAGAATGTGCAATAAAGAAAGATTATTTAA 1074492 29 100.0 37 ............................. AGTGATAGAGTTAAACCTAATAAGATTTTTTTTGTTA 1074558 29 100.0 37 ............................. GAATTTATTTATACTTTTACTATAATGGGTACTACTG 1074624 29 100.0 37 ............................. TGAAAGAAGGAAAATACTACTTAATAAAAGGCCTTCA 1074690 29 100.0 35 ............................. GTAGGAGATATATAAGAAGTACCACGAATAAAAAA 1074754 29 100.0 36 ............................. TTTCTCTACTCAAAAATAGTATAATGGTTTTAGGGG 1074819 29 100.0 36 ............................. GAAAGATTACCAGTCAGTAGGAGCTATCATTTGTGG 1074884 29 100.0 36 ............................. ATACAAGAATCTGAACTTAAAGTAAGAACAGGAAGG 1074949 29 100.0 38 ............................. TTCATCTTTGCAGTTTGAGTTTTAATCTTATCTTGTTC 1075016 29 100.0 36 ............................. TATTACATGAGATGGTACATTTATATCATAATGTTA 1075081 29 100.0 36 ............................. TCAAAATCAACTGTCCAAGATTTTAAACCCATTATG 1075146 29 100.0 36 ............................. TGAAGCTATAAGGATAAAAGATGTAAGAAGAACTGA 1075211 29 100.0 36 ............................. TTACTATTTTTAATAACTCCATTTAAAGTTATATCT 1075276 29 96.6 35 .............C............... TAGTTAATCTATGTGCTTCTTTCATTATTAAACTC 1075340 29 100.0 37 ............................. TTGCTTTTTAAGACACACTCTAAATATGTGCCTTCAT 1075406 29 86.2 0 .................GAA....C.... | T [1075433] ========== ====== ====== ====== ============================= ================================================ ================== 49 29 99.6 37 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTGAAATTTGGG # Right flank : TATATAAAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATGAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAACATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATTGACATGATATCTGTACATTTTTACTTAATTATTGATATATACTTATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTACATCTAATAGCTCCCTTGAAATTTCTTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //