Array 1 29294-26082 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELZ010000029.1 Acinetobacter baumannii strain MRSN82 MRSN82_contig00029, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 29293 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 29233 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 29173 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 29113 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 29053 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 28993 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 28933 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 28873 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 28813 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 28753 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 28693 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 28633 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 28573 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 28513 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 28453 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 28393 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 28333 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 28273 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 28213 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 28153 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 28093 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 28033 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 27973 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 27913 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 27853 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 27793 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 27733 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 27673 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 27613 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 27553 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 27493 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 27433 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 27373 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 27313 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 27253 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 27193 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 27133 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 27072 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 27012 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 26952 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 26892 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 26832 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 26772 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 26712 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 26652 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 26591 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 26531 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 26471 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 26411 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 26351 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 26291 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 26231 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 26171 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 26111 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //