Array 1 744613-747357 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032627.1 Lactococcus allomyrinae strain 1JSPR-7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 744613 36 100.0 30 .................................... TATTTGAGGAGGACAACCAATGAAACTTTT 744679 36 100.0 30 .................................... TGAAGATGATGATGGTAATGCAGCAAGTGG 744745 36 100.0 30 .................................... TGGCAGGGCTTGCTGTTTTAGCTTGGCTTT 744811 36 100.0 30 .................................... TGAAAAGTAATATAATCAGACAACTAATCT 744877 36 100.0 30 .................................... AAAGTATACAACCATGTCACCTTCGCTATT 744943 36 100.0 31 .................................... ATGCCATTATTGTTCTCCTTATTTATAGTAT 745010 36 100.0 30 .................................... AGATACATAAGAAGACCAGTCACGGCTCTG 745076 36 100.0 30 .................................... TCGGCTATGAAATGGGGCGGGTTACATTAT 745142 36 100.0 30 .................................... AAATCCATGCACCGATGACAGTTGTTGTTC 745208 36 100.0 30 .................................... AGGAAATACAAAAATATCTGAGTGAACTTA 745274 36 100.0 30 .................................... GCAAATAATCTGTCCGCTCATGGCGTTTTG 745340 36 100.0 30 .................................... AAAACTCTTTTAGCAGCTTTCTCAGCTTGT 745406 36 100.0 30 .................................... AAATCTGCCGCTGCTCCTATGGATGCCTTG 745472 36 100.0 30 .................................... TCGGAAAAGGTGGGGGATTGTCTCAAGCCA 745538 36 100.0 30 .................................... TTATGGTTAATAACAAGCATTACGTTTTTT 745604 36 100.0 30 .................................... GTGACCCCTGTGTAGATATTCCCATCTAGT 745670 36 100.0 30 .................................... ATGATAATGAATTTCTTGACCCTGATTATG 745736 36 100.0 30 .................................... TTATATCCATCCACCATTTCAGAGAATGCC 745802 36 100.0 30 .................................... GTGGCTTTTCTGTTAAGTCCGCAAACAATG 745868 36 100.0 30 .................................... TCAAAATGTACTGCGTAGAACAAAAGCAGA 745934 36 100.0 30 .................................... AGAATTGGCTTTAACCAAATTCATGGTCTG 746000 36 100.0 30 .................................... CTGATGCCACCAATTCATATAAATGGAGCA 746066 36 100.0 31 .................................... CTTATCATGGAAATACTATCATCGACGTAGA 746133 36 100.0 30 .................................... CAGCGGGAACAAAGGAGTAGCCGCAGGACT 746199 36 100.0 30 .................................... CTATACCAGCGGTAAAACATTAGTAAGTCC 746265 36 100.0 30 .................................... GTACTATTCCAAGAAGATACACAGGCTACT 746331 36 100.0 30 .................................... GCTGAAGCGTTGTTATCTCGTGGTTTGCCC 746397 36 100.0 30 .................................... ACGACTTAATCAAAGCTGTTTCTAGTTTAG 746463 36 100.0 30 .................................... ACAATATTGATATAGTATCAGGGGGGAGCA 746529 36 100.0 30 .................................... CATCTGGGAGCTTGACGGAATTGAAGAAGT 746595 36 100.0 30 .................................... ATTTGACCGAGCGAGAGCTTGAAAACATCA 746661 36 100.0 30 .................................... AGTTTTTTTAATCATGATAATTTTCTCCTT 746727 36 100.0 30 .................................... GATAGTAACTCATGAGCATACCCCGCGATA 746793 36 100.0 30 .................................... TTTAACTGAGCTGTACCATTCCATACCTGA 746859 36 100.0 30 .................................... TATTTAAAAGGATTGATCTTCTTAGTGTTA 746925 36 100.0 30 .................................... CGTGAAATGCTGAGAATTATCATTGAAGCT 746991 36 100.0 30 .................................... TTAATCAACATTATAAAATAAGCTCCTCCC 747057 36 100.0 30 .................................... TCTGATACCATTTAAAATATATAAAGCCAA 747123 36 100.0 30 .................................... CGTACGATATAAGGGCTACATGTGCTTGGT 747189 36 100.0 30 .................................... TTCTGATGAAGTTTTTGTATAACCAGAATT 747255 36 100.0 31 .................................... CTATCATTTTGATAAGATTTACTGTGCTTTG 747322 36 80.6 0 ...................C.........AAG.TTT | ========== ====== ====== ====== ==================================== =============================== ================== 42 36 99.5 30 GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Left flank : TCCAGCAAGTTTTTTAATGACAGAAAAGATACAAGACTTGCTAGAGGGTCTGTCAGTGCTGACAGAAAAAACGGAACTTGTCCATACGTTTGTCATTAGCCAGCAAACGCTTGAACTAGTGTATTTTCCAAATGATGTGCCGAGTACGATTGTTTTGACAGATGATGTTTATCAAATGCCAGATTTTGACACTTTTAGAAAAAGTATTGAAAATCATTATCCGATAAGTTTGAAAATGTCAGATGAAGCGCTCTGTCAAAATTTTTATGAAATCGTCTCAAGCATTGGTAGCAAGGCAAAAGTCGCTGGAAAATCTTATCAAAATATGATATTATTAAAGGTGATAAATGAGATTTTAGGTATTGAAAGTGCATCATTTTCTATCAATTTTGATGAACTTTCTGAGCTAGAACGCACTTATCTTAGTTCTTGAGGATTGACGAATTTTCAAGAATGTTTGGAAATCGTAGGAGCAAAAACCAAAAAGTTTTTAATTTGAG # Right flank : TGGACATATATCTTCTTGACAAATCCAAAGAATAAGGCTAAAATCTAAACATAGCGACTTGAGGGTAGTGTAAGCTCAGGGTAAAAAATGGCTTAAATAATATGAATATTAAAGTAAAGTAAAAAATAAAGGTGGAACCGCGCATTTGCGCCCTTTGTCAGTTTTTGACAGGGTGTGATGTGCGGTTTTTGGTTTGGAGAGGAGAAGAATGAAGGTTATTAAAATCGCTGATGAAAATAATCAGAAGGATAGAATTAATTATTTTGTTAAAGATAATCATTATCTGGCAATTTTTCCAAAGGAAGAGCTGAAGCTTGCGAAGGATAAATTGTCGTTTGTGTTTTCTAATGCTGGGATTTATATTTATATCGGCTTGAAAAATAATTATCGGTATGTTGGGCAAACGGTCAATTTAGACCAGCGTACAGGCACGCATAAGTCTCAAGGCGATTTAGAAAAAGACTTTGAATTTATGGCGTTTTTTGGCATGGAAAATGGCA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAACATTTTCCTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //