Array 1 260345-262752 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUZV01000002.1 Cognaticolwellia aestuarii strain KCTC 12480 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 260345 29 100.0 32 ............................. CGATGATCGACAAACAAATTAAAAGCGACAAG 260406 29 100.0 32 ............................. GTACACCGAGCAACGTGGAATTGACGCTGGGC 260467 29 100.0 32 ............................. GCGTTGAAATAGGCGTGGAGTTGACGCGAGAA 260528 29 100.0 32 ............................. CGAGCGTTATTGCGCACAGGCATAGCAATGAG 260589 29 100.0 32 ............................. CCTGATGTTTCCCCACCGTTACCACTAAATAT 260650 29 100.0 32 ............................. TATTGGCGCGACCAATAGCGGTTAGTATTCAG 260711 29 100.0 32 ............................. GGTACGTATACTCATGATAGAAATAACACCAG 260772 29 100.0 32 ............................. TTATAGGTCGATACGGTAATTCATATTTGACA 260833 29 100.0 32 ............................. GTTTCAGGATTTACATTTGGTAAAAATACTTT 260894 29 100.0 32 ............................. TTTTTTGATTATATCAGTTATCTTTGCTGCAT 260955 29 100.0 32 ............................. GTTTTTTTGAGTTGTTATGCACATTACTAAGT 261016 29 100.0 32 ............................. TAATATAAACCACGTATGATTCACCATCTGCC 261077 29 100.0 32 ............................. AGTTCGCAGGTTATGCCGAGGGCAACCAAAAA 261138 29 100.0 32 ............................. GAACACTAACAAACGGGGGTAAAAACATTGGC 261199 29 100.0 32 ............................. AATACTGAACGCTTAACTAAGCCCAAATTATC 261260 29 100.0 32 ............................. CTAAAATCACCGCCATAACCTGTAATAGTATT 261321 29 100.0 32 ............................. TCTAAATCCCACCTTGAAAAAGTAGTAGCTAG 261382 29 100.0 32 ............................. CTTTTATTTATCATGCAATAACCCCTCCCAAT 261443 29 100.0 32 ............................. GAATTCAGTTGTCAATGGTGACGGCTGGCATG 261504 29 100.0 32 ............................. GCATTCAGTTGTCAATGGTGACAGCTGGCATG 261565 29 100.0 32 ............................. ATTGTTAGTGCCATCAGATAAAAACACGTTGC 261626 29 100.0 32 ............................. CTTTATAATATCAGAGATGCTAACCCAACCAA 261687 29 100.0 32 ............................. TAAACAGTCTTGGTTATTGCAACGACCTGATG 261748 29 100.0 32 ............................. ACTGATAAATTCAAAGGACTGGATTTAGGTGA 261809 29 100.0 32 ............................. TCCGCCTTTTGGCTTATCAAAAACACACTGCT 261870 29 100.0 32 ............................. AGCCGAGGATATTGAGCACTTGGTTTACGATA 261931 29 100.0 32 ............................. GGTTTGCGTTTCGGTAGATTAGTCGCAATTAG 261992 29 100.0 32 ............................. AATCAGATCCAATCAGTAATTTTATTGACGTG 262053 29 100.0 32 ............................. GTTACGGACTGTTTCCACAAGATGTAAATCAG 262114 29 100.0 32 ............................. ATATCCACGTTTCTATGCCAACAGGTCAGCGA 262175 29 100.0 32 ............................. TAACTTGTCAGCAGTCGAATAGAGAGAAAATC 262236 29 100.0 32 ............................. TCGTTATTTGCATTTACTGAACTATTTACTAA 262297 29 100.0 32 ............................. CACGTCAATAAATACGTTAACTTTATTATTGT 262358 29 100.0 32 ............................. CTTGGTGATGGTTATTTGCTGCGTATAGATTT 262419 29 96.6 32 ............................A GTAATTGTTGGTCTTGGTGATTCGATAACGTT 262480 29 100.0 32 ............................. GGGCTTTATCTAAGTGTTGAAAGCTACTTCTT 262541 29 100.0 32 ............................. TTTGCACTATATCATTAATTAGCTAGATAACT 262602 29 100.0 32 ............................. GTGGTGACTTAACGCACGAATCAAACGGCAAT 262663 29 100.0 32 ............................. TTATGGGTTGATGGTCAGGAAATTATGAACAT 262724 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 40 29 99.9 32 GTGTTCCCCGTATCCACGGGGCTGAACCG # Left flank : TCCCCTTAATTGATGAAGTATTATCTGCAGGTGAAATTGAACCACCTAAACCACCAGTGGATGCACAACCACCTGCTATACCAGAACCTAAGTCAATAGGTGATTTAGGGCATAGGAGTAAATAAATTGAGTATGCTTATGGTTGTAACCGAAGCAGTTCCGCCCAGATTGCGGGGACGTTTAGCTGTATGGCTACTTGAAGTTAGAGCTGGTGTTTATATTGGTGACGTATCACGTCGTATCCGTGAAATGGTTTGGTTGCAAGTAACAGAATTAGCAGAAGACGGTAATGTAGTAATGGCTTGGGCAACGAATACTGAGTCAGGATTTGATTTTCAAACTTATGGTGAGAACAGGCGAGAGCCTGTTGAATTAGATGGTTTGAGATTAGTAAAGTTTAAAGCATTGTAATCAAGAAATTAGTATATATAGCTCTTTAAAAATTTGGTAGAATTTAAAAGTTCTAAAAAAACCATTAAAAACAACGATGTTTTTTTAGT # Right flank : GTGTGATTATTTAAATGCAAGAAACAAACAATGGAGGTCCTCGTATACCAGAAAAATTAACCTTAATGCCACTGTGTTTGTCTTTTGAGAATTACTTAATTCAATACCAATAACCTAAACCCCTTAAAATAAAGATTTAACCACATCTCTGAGTTTGATTTTATTCGTTATCACCATCATCTTCGTCTTCATCATCGATAATATCTGGCGTTACTGCGTCAACAACGTCGATAGCACCTCCAACCACTGTTGTTGTGGCACTTACCGCGGTAGACACAACAGCAACTGCAATGCAGCCTGATAAACTAAAAGCAATAGATAATAACAACAAGCTGTGTAGCACTTTTTTCACGGTAATATTTCCAAATGAATAAATATATGAAGGTGCACAATACGCTAATTTTGGGGCGAATCAATCGTTGTTTTTATGTTTTTTGAAAGTCATATTTTCGGCAAACTTTTATCACCATTTTATAAACAGCTAAAACGGATAAAAGCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATCCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //