Array 1 3144995-3144614 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040630.1 Bacteroides sp. PHL 2737 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 3144994 35 100.0 36 ................................... CCCCGATGCGTTGTGCGGCATGAAAAATTTTTATCA 3144923 35 100.0 34 ................................... CCAAGCCATAACACCTTCAAGGGTTACTTTAACA 3144854 35 100.0 33 ................................... GTTCTTGGTTACATAGGTAATGGTGTCATTGGT 3144786 35 100.0 33 ................................... TTCCGGAGCTTCATTCCAATATAGCTCCTTACA 3144718 35 100.0 35 ................................... GAAGGCAATTGCTTTTTTTGCCAGCCAATTGTAGA 3144648 35 85.7 0 ...........................C.A.C.GT | ========== ====== ====== ====== =================================== ==================================== ================== 6 35 97.6 34 ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Left flank : CATAGGCATCTTGAAGATTCCCCGCATTCACTCGAAATAGTTTTTTTCTAAATTCTTTTGCGAAAAAAAGAAAAAACTTAGTCATCTGATAATATGAAGATTATTCTATATTAAGAAAAAATAAGTGTAAAAAGAGATGCGCAAATAATAGCTTTTACGTATATTAGCAAATCATTTGCGAAAAAAGGATTGATATGTTATGCGCTCTTTGAAATATTGTTCTATATATCAGCAACTTACGCAACATAGTTTTAGGGTTGTTTTCGAAACTCGCCCACCCCTAAATATCCAACGATTATTTGCGAAAAATGAAGTTTACACAGCATTCTAATTATCAATCATTTAGGTCAAAAAATCACTATTTACACATCAGAATTACAGAAAAAAAGACCTACTTTTGCGAAAAAAGACTTAGATTCGCATCTACTATTCTGGTTTACAACCTATTATGATCACAGACAAATACATTTAAGAATATATAATAGTCTAATAATCAGAGT # Right flank : TGGTTCTTCTTCAAATTTGGTGGTAAGCTTTCTTCTACTCATGAATCTAATTCAGTTTTCGGAAGTGTAAGCTCTCGTTTATAGTTGACAAGAAAGCAAGTATCCCGGCTTTCGCCCGAAAAGCCCATTCGTGAGGCGGAGAAGCGAATTTTAGACTAAACCATCTGAAAATCAACATCTTTAAAAAGTAAGATTTCTATCCTCAAAAGCTTTGTTTTAACACAGAGTTAAAGCTTATTCTTTGGATGTAAATAACAAGTTCTTTAAATGCATAAGACTTGTTATTTGCGCACAAGAACCTGACAACCTGAAAAAGGCGTTAACAATGTTAATTGAAGAAAGGTATAAGGATGAAGATACCGGTTCAGACGGTGTAGATTCACTTCCGAAACTTGAGTTATCTGATTCAGCCAGTGTCTGTTTTTTCTTATTAAAGCGTAAGCATTCGGCCTCGTGCGTGTTTCTCTCCAAGTTATAATAAAGTCAAAAGCCAGACGTAT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 2 4022124-4020493 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040630.1 Bacteroides sp. PHL 2737 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 4022123 29 100.0 34 ............................. AATTATGCTGCTTCTGGTTCTGCTTCAATTAGTT 4022060 29 100.0 33 ............................. ATTGATATGCGACCTTTTAGGTTTAACAATTGT 4021998 29 100.0 35 ............................. CAAGTCCTTGCAAAGTTCGGATTCATTGATGAGGT 4021934 29 100.0 35 ............................. ACTTTTATGGCTGGTATTCGTGCAGGTGGTATTTC 4021870 29 100.0 38 ............................. TTACGTAGTGCTTTTGGTAAGCCTCTTATTGTTAATTC 4021803 29 100.0 35 ............................. CCAACAGCATGATTTACAAAACGAGAACGATAACC 4021739 29 100.0 34 ............................. AAATAAAAATTCTTAACTTCCATAACTAAACAGG 4021676 29 100.0 36 ............................. AGAGTAGAAAGAGCTATCTGTTTTTCCTGTGGCAAA 4021611 29 100.0 37 ............................. AATATCGACGAATCAAAAAATACAAACGCTTAGAAAA 4021545 29 100.0 34 ............................. CTTTAAAAAAAGTGATTCTTTTGATTCACGATAT 4021482 29 100.0 35 ............................. TTCTTTGTATTATGCACCTGAGGAACTTCGGTTGA 4021418 29 100.0 35 ............................. ACTTTCATGTTATTGATCGTTTTACTGATCGGTTT 4021354 29 100.0 35 ............................. ACGTAGAGGTCGTTAATTGTCTTTAGTTTTTACTC 4021290 29 100.0 35 ............................. GCTTATTTATTATAAGAAAAGACGCTTTATTCATG 4021226 29 100.0 34 ............................. ATGCAAGCACATCGTTCGACCCGTATTTGTGGTT 4021163 29 100.0 37 ............................. ACGAGCTTTAACAGGGTCTTGGGACCAACGATCCATC 4021097 29 100.0 35 ............................. TACGAAAACAAATTACTCATTTTTCATCAAATTTA 4021033 29 100.0 34 ............................. TACGAAAATAAACTACTCATTTTTCATCAAATTT 4020970 29 100.0 35 ............................. TATTAAACAGGTTTTTTGTCAACCTCTGCAATCAA 4020906 29 100.0 34 ............................. AATCGCCAGCTCTTAGAAACAAACTGTCTAAAAC 4020843 29 100.0 37 ............................. ACTTAATAAGTCTAAGTATGCGTCTGTGGTTGATGAT 4020777 29 100.0 36 ............................. GATAGAATCATAAAGGTTAAAAAAGATTTACTCATT 4020712 29 100.0 35 ............................. CTGTCGGAGTGATGAAGTGGAACGGTAGCTCAATA 4020648 29 100.0 34 ............................. AGTAACGTTCCTGAGAGATGAACTTAAACTTGAT 4020585 29 100.0 35 ............................. CTGAGAAAAAAGCAAAATAAAGATAAAATGACAGG 4020521 29 86.2 0 ..A......................G.CT | ========== ====== ====== ====== ============================= ====================================== ================== 26 29 99.5 35 GTGTTAATTGTACCTTATGGAATTGAAAC # Left flank : CCGTTTAAAATGTATTGGTAAATATGTATGTTATTTTAGTTTATGATTTTGGTGAAAGGAGAGTTTCTAAGATGTTGAGATTATGTCGTCGGTATTTGAATTGGATCCAGAATTCTGTGTTTGAAGGTGAACTCTCGGAAGTACGTTTAAAAGAGCTATTATTATTGGCAAAAGGGTTTATGAATCCCGAAGAAGATTGTATTATCATTTTTAAAGGGGCTACTCAATGCTCTTTGGAGAAGGAAATAGTGGGTAAAGAACTTTCTAACATCGATAATTTTTTGTGAAACGGTTGTCGAAGTGGATCGTTATTGTGAATTATTCAATGATAATGCAACCGAAACGCTCTATGACGTGTTGATACATAGATGTTTAGCGCCTATGTCGCTAACCCATGTTTTTTATATTATTCTTGATCGACGCATTATTTCTAAATAAAAGTATTTTTTCTAAAAAGTATTTGTCTTATTACTAAGTGATTGCGTTGGTTGATGGACAGA # Right flank : AAGGAAGATGTATATTTATAAGATTGGCTTAATAGAATGAATTTTTTTTTCTTGCTAGCATATTCTCTCATTATCTTTTGGGAAATGTTTTTATTAATTCTATTTCCTTTTTATTAGAAAACAATCCTTATATTTGTCCCTTGTATTATTAATTTAATGACAAATGACACTTATGAAGACATTGAATTTTATGAAGACGCTGCTTTTATTGGTAGCTATAGTAGGCTTGAGCTCTTGTGGCGACAAGTATTATTCAGATGATTATTTGCGAAACAGTAATGCAAAGTTATGCGGAAAGACTTGGGTGAATGATTCTGATAAAAATGATGCGGATGAATGGGTGCGCCATACATTGAAGTTTGATGATAGCGGACGGCTGGCAGAAACTTATGCCTATTATCATTTGAATGAAAACCAACCTTACCGGACAGAAACAAATAATCTGACTTGGTCCTGGATAGACGATTCGATGGAAGGAATTGTTTTTGACTATGGCGTAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //