Array 1 69490-69141 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKT01000021.1 Bacteroides salyersiae strain BIOML-A33 scaffold21_size99883, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =================================== ================== 69489 42 100.0 34 .......................................... CAACCATTGACGGTGTGGATGGTTTACCTGAGGA 69413 42 100.0 35 .......................................... CAACGATATATAAGCATTTTGGCGTTAAACTTCCA 69336 42 95.2 35 .............................A..G......... TAGCAAAATCACATCATCAATTTCTTCTTCCAAAG 69259 42 81.0 35 T....CT.G..A...A....A...........G......... CAACAAATACTTTTTCGATATTATGATCGGCAAAG 69182 42 83.3 0 ......TCG....C................A....T....T. | ========== ====== ====== ====== ========================================== =================================== ================== 5 42 91.9 35 CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Left flank : ACTGGCCCAGCAGAATACATCCTTTTCTCCTTGTATGTTGGGACCCGCACCTTTGGTATAATCCCAAACTTCAAGTACCAGATCAAAGAAAGGTTGTGGGGGCGTGTCCTGTGCCTTACAGAAAGAAGAGATAAGTAACGCTGTCATTAGTAGTAAATAATTTTTCTTCATACCATGTGTTTTTTAAGTTTATGATCTTTAATTTTTTTTGGAGCAATACAGATCGGGACTTCGTCTTTAAAGAGATGCTTTCTCTATATTACTTTATTATAAAGCGGATGAGAAGAAAAAAACCACTAATCTTTTTCCAATAATAATTTAGTTTGGGATTTAATTTAGCAAAAAAAGTACAAGATATTGATGCTCTTGGTAGTAATTAGAACTCTTTTTAAATTAAAAATCCCATTAACTAATGGGATTTTCTTGAAGAAACAGCATTTATTTTTATTTTCTAAATTTTATTGTAATCTTTTGAATTACAGTTTGTTGTTGGCATTGTA # Right flank : CAACTAAAAAATGGTGGTTATTAAAATAATATTTGTAATTTTGTAGTCCTAACCCTGTGGGGGAGTGAGACTTTAGCGGGTTATGTGATATTTGTATCGTTTAGCCGCTAATTTGTTTTCATACTTTTCCTAAAGCAAACTGCTGTCGTTGCTGAGGATAATCACGATTGTGTAGAGAGAGAATTCTAACTTAGTGCAAATGGAATTTGATATGAACTCAATGAAACATATTTGATTGATATATTGGTAAATAACCATTGTTAAAAAAAAGTGTTCATTAATGAATTGGGGCGTAAATTATAACATTTTACATCTTACTTATCTATCTTCCTTTTTTAACATTGTTAATTGCATTTCTCATATATACTTTCCTGCTTAACAAGAAGCGTATTTCTTGTATATAAAGAACGTATCCTTTGTCGACAAGAAATACGATTTAACGCAGCGTTAACATGGCTTTCTTTCGTGTATAAACAACGGCTCTTTGATCTCAGGAAATT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 145385-145610 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKT01000009.1 Bacteroides salyersiae strain BIOML-A33 scaffold9_size374782, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 145385 30 100.0 35 .............................. TACAGCAGCGCTGGGTTTAGTCCTGCTGCTTCAAG 145450 30 100.0 35 .............................. AGGAAAAATTCACAAGACACAGAGCCTACAAACTC 145515 30 100.0 36 .............................. GTTGATCCGCTATTGTTTTTAGATATAGTCATACTC 145581 30 73.3 0 .T...............A......AATTTG | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 93.3 36 GGCTTAATTGTACCGTTGTGGAATTGAAAC # Left flank : GTGAAGCAGAAGTAAAAGAAGGGAAACGTCATGGACGTTATCGCGAATATTATGAAAATGGAAAACTGAAACTTCGCGGGAAATATGCCAATAACTTACCTAAAGGTACATGGAAGTATTATACGGACGAGGGAGAGTTTGAACGCAAAGAGAAATATTAATTGTTATATTGGGTTTTGATATAGTTTTATTAAATAGAAAGCCTCTGATTGATCAGATGAAAATGTATGCTTATGTATTACTTATTTTTTTCTTAAGAAATAAAATTATGTCAGAATTTTATTTGTAATTTAGTTGTCGATAATCGTTTGTATAGTCTGATTAATCTGGATTGATATATAAATTTTTCTTTGAAATGTTGATATACAGTGAAATAGCTATTGTGTCGATGTTCCATGCTTTTTATACGATTAGCCATCGACATAATTGATGTTATAAAATGGTGTTTTTATTGGATAACTTGCTTATTATTAGATATCTTTTTTGAATATTTAATGTGG # Right flank : GAGATTATCCTTATGTGTAATCTTTTGCTATCTATGTTACTACTTTTTTATTTGTTAAAAAATACAAGAAGAAAACGCGCAATTATATTCTTTTATATCATTTAACATCAGATAATTAACCTAATTTCTATTTTTGAGACCCCAATTCGACAATTCATATTTAATTATTAACCTATATATTTTATATGACTATGCGAACTAATTATTTATTATTTTTAGTAATCATGTTGGGAATATTTCCCTTGAGTCACACACAAGCATCCGATTCTATTTCAAACAATGTAGTACTTTATTCTCCTTACACGAAAATCTCAGTATCGCCCGGAGAAAGTATTAACTACAGTATCGATTTAATAAATAATGGTAGTGAGATTTATAATGAGAATATCTCATTGAGTGGATTGCCGTCCAGTTGGAAATACGATATAAAATCCGGTAGTTGGAATATCAAACAATTAGCTGTACTGCCCAATGAAAAAAAGAATTTCAGTTTAACGGTG # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 159327-160889 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKT01000009.1 Bacteroides salyersiae strain BIOML-A33 scaffold9_size374782, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================== ================== 159327 30 100.0 35 .............................. ATTGGGAGAAAGATTTTTTAACCACTGCCGTTCAG 159392 30 100.0 35 .............................. TGTTTAATATTTATATGTTATGAAAGAAAAAAAAA 159457 30 100.0 35 .............................. AAGCTAATCAAGCCGTGGGATCGCAACACGGGAGA 159522 30 100.0 35 .............................. AGTGGAGGATCACCACAAGCGATAAAATCACAAAT 159587 30 100.0 37 .............................. ACAAAATCGCGGTAATCCTTCCACAAGGCACGCAAAG 159654 30 100.0 37 .............................. GAGTAGACACACAACTCGCACAATCATTGATCGACCT 159721 30 100.0 34 .............................. TGGAAGTCAATCAAAAAGCGATCAGCGCAAAAAG 159785 30 100.0 34 .............................. AATATGAACGCAGGCTTCAAAAACAAAGAAGGGG 159849 30 100.0 62 .............................. TGGCTGCTTGTGCAATGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACAAAGAATTGG 159941 30 100.0 35 .............................. TGGCTGCTTGTGCAATGTCCCATCTGTCTGTTCGG 160006 30 100.0 37 .............................. AACTCCACTTAAAGAGAGGAATTCATAAACAACTAAT 160073 30 100.0 34 .............................. ATCGTTGGATGTGTTAGTACGTTTGGTTGTAAGT 160137 30 100.0 34 .............................. AACCTTCTATTTCGTACTGTCTTGACAAGATCAT 160201 30 100.0 38 .............................. TGTTATATTTGCAAAGTAATCAAATCTATTATTCACTT 160269 30 100.0 35 .............................. TTAACAGAGTACTACGAATTCAATGGATACACTCC 160334 30 100.0 36 .............................. GTGGTAATCTTGCAGGTGCTTCCCCCCAATTGAATG 160400 30 100.0 36 .............................. ACTTTTGAAGTCAAGGTATTGCGGTTTGTGTACGAT 160466 30 100.0 34 .............................. GATTGGCGCGGTCGCTTTCGATGATTTGGCCATG 160530 30 100.0 38 .............................. TGTCAGAAGCATCAACCGTTCCATCACCTGTAATCTTG 160598 30 100.0 37 .............................. CTGTTTCTTACGCTTACCTATAATAATGAACATCTCC 160665 30 100.0 34 .............................. TGAAGATGATCCTGTGCGGTACGATTGTCTCCGG 160729 30 100.0 36 .............................. AATTGACCTAAGGTTATAAATATACCTAGTAATGTA 160795 30 96.7 35 .................A............ TAATAATTGGCAGCAGTACCCATTGCACAGGCATC 160860 30 86.7 0 ............T....A..A.......T. | ========== ====== ====== ====== ============================== ============================================================== ================== 24 30 99.3 37 GTATTAATTGTACCGTTGTGGAATTGAAAC # Left flank : CCTTTAAAATGTATTGGTAAAATATGTATGTCATTTTGGTTTATGATTTTGGCGAAAGACGAGTTGCAAAGATGCTGAAGCTATGTCGTAAGTATTTGAATTGGATACAAAATTCCGTATTTGAGGGGGAAATATCAGAAGTACGATTAAAGGAAATGTTATCTGCTGCAAAGGCTTTCATGAAGGAAGATGAAGATAGTATTATTGTTTTTAAAGGTTCCTCACAATGTTCTTTGGAGAAGAAAATTATCGGGAAAGAACGGTGTAGTATCGACAATTTTTTATAATTTAGTTGTCGATAATTGTTTTTATTGTCTTTGCAATAAGGCTCTACGTTGTAGATCGTTCTTTGACGTGTTGATATACAGTGAAATAGCTGCTATGTCGATGTCCGGCATTTTTTATGTTATTATCCATCGACATAATTAATCATATAAAAAGCATATTTGTTATTTGCTAACTCACTCATTTTTAATTGTTTTTTTTGAGTGTTTGTTAGA # Right flank : CATGTGAACCGTAATTTTGTTGGAACAGAGTGTTGTATGTTAATAGCACTACCATGAAATGAGATTTTATAGATTACTAAATGAAAGGGTGATCTACGTCACATTGTGAGCGCTTTAAATACCGGTTCTGCCTTTTGTATTTCTGATTCAAATCCAAACCAGTATCCTGCTTGTCCTTCTTGATTGGCGGGCAGGAAACATAAGCGTAATGTCTCTTTGTACTTGCCATAAATGGTTATCCACGTTTCGGGAGGGATTTGTCGTTTCGTTTTTACTTTTTCTGCCGGAAGTTTCTTTAGTGACATGCCCGCTTCTATCCAAGCAATGCTGACCTGTGTCTGATAGGCCGGATAATTTTGCTTACAGAATTCATACAAAATCAATCCTCTTTTTTCCAAGCTCAGTGGTTGGTCTATCAAGCCGATTTGCATAAGGTGATCCAGAAAATGATGCAAGAAATGTTCGTTTTCCAACATCAGTGTCCGAGTGATGTTTTGCCA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 3 315062-317721 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKT01000009.1 Bacteroides salyersiae strain BIOML-A33 scaffold9_size374782, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 315062 35 100.0 34 ................................... ATTGTTGATCATTTGAGTGAGGAATTGTCTGCAT 315131 35 100.0 40 ................................... GCTTTAATTGGTGCATTTGTCGGCGTTTGCTGCAATGTAT 315206 35 100.0 38 ................................... GCAATAGTAAGTGTTTTTGTCTTCTGTGCTCTCTTTCT 315279 35 100.0 34 ................................... AAGTATATCTTTGCCCGGGCTCGTGAAAGCTTTG 315348 35 100.0 39 ................................... AAAACTTTATACAAAGTGGGAAAGTGTAGGATGTATAGA 315422 35 100.0 35 ................................... ACAAAACGTTCAAAATTCTAAATAACGACCACCAT 315492 35 100.0 45 ................................... CTAAAGCAGAAATGCTGATAAAGGGAAATACCCAGCTGTCAAAGA 315572 35 100.0 34 ................................... CTTATCATCGTTGGCGTTTGCTCTATGCAGGCCC 315641 35 100.0 36 ................................... AGTGTTACTGCCTTTCAGCCGGTATGCCTATTGGTA 315712 35 100.0 36 ................................... AAATATGGCGCTGTCATCGGCTTGGAGAAACGCTTC 315783 35 100.0 36 ................................... ATAACTGGAGCACCAGAAGAAGGCATTGACCAAACA 315854 35 100.0 36 ................................... CTTCTATGGCGACCCCAAGTACAACGGTACCAAGGT 315925 35 100.0 37 ................................... AATACCTCGCGAAGGTAGCTCTGTTCATCCATGAGGA 315997 35 100.0 34 ................................... TATGAGCATTTTGCCACGCCGCAAAGGTATAAAA 316066 35 100.0 33 ................................... ACTGTTCTCATGATTATAGCGATGCCTTTGCAT 316134 35 100.0 33 ................................... CATCAAAGAAAACATATTGCATCTATCAAAGGA 316202 35 100.0 37 ................................... CTCAAGAGTATAAAGCTCGTGAGGTTCACTCCAGCGA 316274 35 100.0 32 ................................... GAAAGACAATGCCAAACTTGCTATATTTGCAA 316341 35 100.0 34 ................................... ATTGTGGTTACATTCCTGCGATGATGAATTTGGG 316410 35 100.0 36 ................................... CCAGCCGTAGCGCCTTTATTTGAAATTGCCGAACCC 316481 35 100.0 35 ................................... GTTTGTACCTTGGTGCCGAAGGCGGTTACGCATTC 316551 35 100.0 36 ................................... TTTTCTCCTGGGCATGGGAAACAGCCGGCAAATACT 316622 35 100.0 37 ................................... GGTTTCTGGGGTGGCTATGCCAACCAGGATGAAGTCT 316694 35 100.0 33 ................................... TCATGAAGAGGCATTTGAAATTCCTTTTGTAGG 316762 35 100.0 38 ................................... TTTTTCAGCGGAAATAACCGAAGCATTAGCAGCCGGAA 316835 35 100.0 36 ................................... AGTAAAGTGGGAAGAAGTTGTAAAAGCTCGTATGGG 316906 35 100.0 38 ................................... TTGAGGGTTGCTGCTGGTCCTCTATCGAGTATAATAGT 316979 35 100.0 37 ................................... AAAAGTATGAAGACAATGAGAAATTTCGCAGCTGCGA 317051 35 100.0 35 ................................... ACAGTAGCCATCAACATAGATCACTTAGTAAGTGT 317121 35 100.0 33 ................................... GATTATAGGCTCTGTCAATGAGGATCCATCACT 317189 35 100.0 35 ................................... AACAGCGTTCGAAATATTGCGCCTTTCCACACTGT 317259 35 100.0 37 ................................... AAATCTCTTGAAAGAATACATTGACATATGTCTAAGA 317331 35 100.0 35 ................................... TAGACAGTGTATAACAAAATCAATATATCATGAAA 317401 35 100.0 35 ................................... ATACATTCGAAAACTTTATATAAAATGGGAGAGTG 317471 35 100.0 37 ................................... TATATTTATAACCGCTGCAGAAGCATTTGCCAAACGA 317543 35 100.0 36 ................................... TCACCTATTATGATGTTTGCTTTCGTGGCTTAAATT 317614 35 100.0 38 ................................... TTATTTATTATTTGTATGGTAATTTCTGCTTTTGCCAA 317687 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 38 35 100.0 36 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : GTGCCGGTTGATATATGATTTTTGTATAACAATTGACGCAAATCGGATAGTATATGACTGTATCGGAGCGTTTATCCAATATTTTTTTTATTTTCTCTTGCACTTGTAATAGTTGGATATCGGTAAACATACATTCGAATACACTGAAATTGACTCTTATTCCATATTTTTCCAGAATTTTAGAGACGCGTGCTCTTTTCCGGTCTTCTTTAATATCGTATGCTACGACACAGAATGTCTTTTTTGCTCTTGCCATTTGGTGTTGCGTATTTGGAGGTAAATATAATGAAAATGCGGGATATGTGGTATTGGAAAAGAAAAATTTTGAGGTTAAAATGGGGTAATATTATTAGAGTGAATTAAAGGTGTATGGATGTATCATTGTTTCTGAATTCGGGATAATGAGATATAAATGATTTTAGAGAGTTGCTTGTCTTAATATTCTACTGGAAGTAACTCAAATACGGGATCTGGGTTGTGACATGGCGTAACGGAGAAAA # Right flank : TACTCTGATTATCAATAATTTATTTTTTACTCTTTGTTTTGTATATTTCTCATAAAGTATTGTTATTTAATACAATACGCTATATTCCAATAACTTTTTCGCAAATGTATGTATTATTTTTAAGAAAATCAATAATTTGTTTGGCTAATATAGGCTTATCTGCTTAAAAATAAGATATTTACATTGAATATCTATTTTCGCAAATGATTTTGATTTTCTTTAAAAAAAATCATTTTCGAAAAACAGCATAGAGGTATTATACAATATATTATTGATTATAAATGCAATACGTCAAAGATCACTTGTATAGTAATGATTCATTTTCGCAAATGATTTACTTTGTTGCTAACATGTATTTTGTTGCGAATGTGATTTAAGTAATACAATTTATCTAAAAAATATAATATCAAATAAATCAGATAATTATCTTTTTATCGTTTTTCGCAAGAGTTTGGCCTTTTTTCATGTTTTGTTCACTTCATCTCACCACTTGGCTACAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //