Array 1 8234-5145 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACNFF010000036.1 Vibrio fluvialis strain GCCln93 NODE_36_length_25493_cov_29.765631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8233 28 100.0 32 ............................ GAAAAGCTTCGCGAAGAAATCAACCGCAAATC 8173 28 100.0 32 ............................ GAACCAGCGACCGGGGTTGTCTCGCAACAGTG 8113 28 100.0 32 ............................ AAACGTGCAAGCTCGACAGCTTCGGCTTGACA 8053 28 100.0 32 ............................ TGCAATAGCAAGAATTGCAAAAGTAACATCAC 7993 28 96.4 32 A........................... GATAACGTCACTTACTGTGTTACCGGACTGGC 7933 28 100.0 32 ............................ ACACTATCGGGTCATCGACGCGTAAAGAGCTT 7873 28 100.0 32 ............................ AGGAAACTTAACGGCGTACTCGGGTTGCAATA 7813 28 100.0 32 ............................ TTTTCTCTAGCGCAAGCAGGGGATATTGTTTA 7753 28 100.0 32 ............................ TGTTCAGGTTACCGAGCAAGCACTCGCTGCAG 7693 28 100.0 32 ............................ CTTACTAGCTACGCTTTTGAATCAATGTTCAA 7633 28 100.0 32 ............................ TGAGATACGGCAAGCCACAGGTTCAGTGTTGC 7573 28 100.0 32 ............................ ACCAAAAACCGAGAGGGGAAAAGCGCCGATCA 7513 28 100.0 33 ............................ TGAGACCGCGCCGCGCGAGCCAATCGGTTACAT 7452 28 100.0 32 ............................ ACCAAAAACCGAGAGGGGAAAAGCGCCGATCA 7392 28 100.0 32 ............................ TCATTTCTTCACCTATGCACCATCATTTATCT 7332 28 100.0 32 ............................ GCACCCTGGCGATGGAGGGGCTGGGCGAGATC 7272 28 100.0 32 ............................ TCTCTTTGGAGTTTCATCTTTCTCTGCTCATT 7212 28 100.0 32 ............................ TGCTAAACTCAGTAGTAATATTGACATTGAAG 7152 28 100.0 32 ............................ TTATAAGAAACGGCACCTGATTTAATGGAATC 7092 28 100.0 32 ............................ AGAATGGACAGATAACCGACTGTCGGCCTATT 7032 28 100.0 32 ............................ AACCTGCAGCGAGTAGCTGGTCGCGGGTGTAG 6972 28 100.0 32 ............................ AACAATCTTCACTGCAACCATACGCACCTCAT 6912 28 100.0 32 ............................ TACATCGGTAACGGTGTAATCCGCATCAAATC 6852 28 100.0 32 ............................ ATTCCTGTATTTACCGGTATCGAGGTGAAAGA 6792 28 100.0 32 ............................ GATCGTACCTTTGCCGCTACGACGCAGGCCGA 6732 28 100.0 32 ............................ CTAACGCTATCGTATCAAGCCTGTACAGTGCG 6672 28 100.0 32 ............................ AGTCAGAAACAGGCTCACAAAGCCCTGGAAGA 6612 28 100.0 32 ............................ GTGAATTCCGTTGTTCGGTGTTTGCGATACTC 6552 28 100.0 32 ............................ ATCATTTTGTGGAAACTATAATCGCGGACGAG 6492 28 100.0 32 ............................ TGTAATGGATGACGTGGTAAATGCCATTCCGG 6432 28 100.0 32 ............................ GAATGGGTGAAATCTGGCGAAGTTCCTGCCGG 6372 28 100.0 32 ............................ TCACTCTGTGCAGCAGTCGCTTCACTATTAGC 6312 28 100.0 32 ............................ GACGAGCAGTTCCATAACGCGACCGATCGTAC 6252 28 100.0 32 ............................ GGTAACGATATGATTAACTTCGGCCGTAAATA 6192 28 100.0 32 ............................ ATCTGTGCAGGCTGCTGTACGGAACCTCTAAA 6132 28 100.0 32 ............................ ATAAAGCGTACGTCGCATTCCGCACCGGACAG 6072 28 100.0 32 ............................ ATTTTCGAGAGTACCGTCGCGGCGGATCACAT 6012 28 100.0 32 ............................ ATCTATTAATGTACCAGCGACGAAACACTCAT 5952 28 100.0 32 ............................ GGACTGTCTCGAAGCCGTGTGTGTCGACCAAG 5892 28 100.0 32 ............................ AGCAAGCGCGCTTCCATTATCTATAGGTTGCG 5832 28 100.0 32 ............................ AACAATCGCATATATCATGAGCCTAATCTCGT 5772 28 100.0 32 ............................ TAGGTATGCCTTATTGCTAGAGCCATTCTAAT 5712 28 100.0 32 ............................ ACTTCACGCGACTGGCGCAAACGCTGGCCCAT 5652 28 100.0 32 ............................ GCTCATTCCACAAGTGGCAATTGAAACCACTC 5592 28 100.0 32 ............................ ATGCAAGTCACTAATATCAAATTCCACAACGT 5532 28 100.0 32 ............................ GCTAAGCGACAGAGGTAACGACCAATGAACAC 5472 28 100.0 32 ............................ GCTAAGCGACAGAGGTAACGACCAATGAACAC 5412 28 100.0 32 ............................ CAACCGCGCCAGTAATCGCGGAAAGGCTCGAT 5352 28 100.0 32 ............................ TTTCGGGCGCTATGCGTCTATGTGACATCATC 5292 28 100.0 32 ............................ AAGGTGCTGGCCACGGCACTCAGTTGCGTCAC 5232 28 100.0 32 ............................ TCGACGAAGTACTTTACCCCAACTGCCCGCTA 5172 28 71.4 0 .C.......TAC.......AGG.....T | ========== ====== ====== ====== ============================ ================================= ================== 52 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATGTCACTTACGTCAGCTTTGTACGCAAGCAGGTGAAATCACCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGCACTATGGGCAGCAAAATCCGGTAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAGTTTCCGCTGTTTATTCAGATGCAGCAGCAAAGCACATCACAAGATGGGGGCTTCGATTGCTATGGCTTGAGTAGCAAAGCGAATGGACAATCATCATTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTATTTAAAAATATGTTTTAAATACAAATGGTTGCAAATGGTAGTTTTTAAAAGGGCAAAAATGCATTTTTCATCCTAACTACTTGTTGCAGCATTCTTTTATAGATTTATTTTATT # Right flank : TAAAACGGGATTCATGGCAAACGGTCGTGGAAGTTGTATCTTACATAAAAACCTAACAACGTCGATATCAATAGGTTTTTTGTGTACTTATTGGTATGTGTAGTGTGTTATTCTGAATTGGTTGCAAGAGACCAACATTAAATTTTTCATAATTGTTTATTGATTTAGTTAAATCATACGTTATTTTCGATAACAACAATGACATTTTAGGTTCGCAAGTATCCAATGATGTTTGATTTCCAGCATTACTATTTCTTACATTGCCACAAAGCATCCTTGTTCATATTACCCAACTAGTGACAGTGTCTCCGTCATTACTTGATACCCAATCTTCTCGCTAGGCGGTGTAGGTTTCCACTATCCAGTTCCAATTGTCGAGCCGTCGCTGCCCAGTTGCCTAGGTTATGATTGAGCGTTTGAACAATGATTTTTTTTTGATACCTATCCGTTGCTTCTTTAAGCCCCATACCTGATTCACTAATCGGCGAAATGTTGGTTGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //