Array 1 1381848-1381149 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTJS01000001.1 Streptomyces sp. QL37 scaffold1_size8772908, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1381847 30 100.0 31 .............................. GCACGAGCACCTCGCCGGACGGCACGAGCGA 1381786 30 96.7 31 .............................C ACGACAGGAGCACATCCGATGATCACCACTC 1381725 30 96.7 31 .............................C CGGTCAACACCCCATCAACGCTGCGGTGATC 1381664 30 96.7 31 .............................C CGTACGTCCACCCCAGGGAAGCGGAGATCCG 1381603 30 100.0 31 .............................. TCGTGTGCCAGACCGCTGCCGACGTCCAGGA 1381542 30 100.0 31 .............................. GCACGAGCACCTCGCCGGACGGCACGAGCGA 1381481 30 96.7 31 .............................A CCGGACAGACCGGTCCCGCAACGACAGGACC 1381420 30 93.3 30 ............C................A AGTGGAGGCGGCACTCAAGGCGGAAGGGCT 1381360 30 96.7 31 ............C................. CCGGCTGGGACCTGCCCGGGGGCATGAACGA 1381299 30 96.7 31 ............C................. TCTTCGCGAAGAGCGAGGGCGACGGGTGGCC 1381238 29 90.0 31 ............C..........-.....A CCGAGTCCGACCGGCGCCGCCAGGACCTCGT 1381178 30 90.0 0 ............C.....C..........G | ========== ====== ====== ====== ============================== =============================== ================== 12 30 96.1 31 GTGCTCTCCGCGTGAGCGGAGGTGAACCGT # Left flank : GGGCGCTGACGTAGGCAGGATCGTCGCGAACTGGCCTATAGCAGTCGGGAACCTGGGCCTGGAACGGGGGAGTGATCTTGCCGATGTCATGCAGCCCCGCCCAGAACGACACCACCGTTCGCGCCTCCACCACACTCAGGCCGAGCGCACCCCCAACAGCCTCCCTGGTCTCGTCACTCAGAACGGCATCCCACAACTCCTGGAACACCGCACCTGTGTCGAGGAGATGACAGATCACCGGATACGGACGCGGCAGCCCGCTCTGCTTCCCCCATAGCCGAACATCCAGAACACAGTCCTCCGAGGTGCCCGCCTCGTCACGCTTCATCATGAGCACAGAGATAGCACCCACCACTGACAGCAACCGCAGGTAGTTCAACGTCGTGCCGACACGAAGAGCGAGCCTTACACTCGCAGCGGACGACAAGGAATCGAGACGCATGCACGACAACACCCAGCAAAGAAACGGCAAAGCGGTCAGATAAGACCAGCTCGCGAAG # Right flank : CGCACGAAGCTCGACAGCGCGATGCGGGTCCGTGCGTCCAGGTCGATGAAGCCGGACGGGTGCTCCTACGCCATACGAATTAGAACACTGATAGCAAAGCCGCCTTGAACTGCACCCTTTCGGGGACATGCCCCGTCGGGTTCCCGTGGCTAGCATTTTGCACGAAGGCCACCAGGGTATTCCCATACGGGAACCGCTAGTCCGGTGTGGCGGAATCGGGTGACGGGCAGGCGAGGGAGTAACCATGATCGCGAATGGAATGCAGGCGGACCAGATCTCCGGGGTGTCCTGGAGGAAGGCCCGGGCGAGCCTCAATAACGGGAACTGTGTCGAAGTGGCTTCCCTTCCGGAGGGGAGTGTGGCTGTGCGGAACTCCCGGTTTCCGCAGGGGCCTGCTCTGGTGTTCAGCAAGGCGGAGTTGGCTGCGTTTCTCGACGGTGCGAAGCGGGAGGAGTTTGACGACTTTGCCGCGTAATGTGTGAGCGGAGCGTTGCGCGTTG # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGTGAGCGGAGGTGAACCGT # Alternate repeat : GTGCTCTCCGCGCGAGCGGAGGTGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1391514-1399293 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTJS01000001.1 Streptomyces sp. QL37 scaffold1_size8772908, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 1391514 29 100.0 32 ............................. GTTTGTAATCGTGTCTGATCATGAGGGGGAGA 1391575 29 100.0 32 ............................. TCCGGCATCCCCCTCGGCAAGAACGCCACGAC 1391636 29 100.0 32 ............................. CTGCTCCACTCGTCGTTCCGGTCGGAGCGGGC 1391697 29 100.0 32 ............................. GGACCGGGATCCGCAACACCCGCAAGCACGCC 1391758 29 100.0 32 ............................. GTCATCCACGGCTACGTGCCCCTTGACCTTGA 1391819 29 100.0 32 ............................. TCCAGGCGCTCGACAAGTCACTGGCCTCGATG 1391880 29 100.0 32 ............................. CACGGGTTTGGTCATTCGTTGCCCCTGCTCCC 1391941 29 100.0 32 ............................. CACCAAGGTCGCGGCACCGCTGATGGTCCACG 1392002 29 100.0 32 ............................. TTCCCGGTACTCGACATAGGGAGGCCCGCGGA 1392063 29 100.0 32 ............................. GTGAAGGGCGGTCAGGGGCAGGGTCAGCAGGC 1392124 29 100.0 32 ............................. CCCCAACACCGAACCTGCCGCCCGGCACCGGC 1392185 29 100.0 32 ............................. CGACGACGTCGTGGCAGGCAGCAGGGTCACCA 1392246 29 100.0 32 ............................. GCTGATCCGGCGGCGCTGGGCGCGGTTCAGCT 1392307 29 100.0 32 ............................. GTTCCGCTTCCCGACGGAACTGACGTGCGGGT 1392368 29 100.0 32 ............................. GACGCTGCTGACGCCGAATCACCCACCATGCG 1392429 29 100.0 32 ............................. GTGGAAACGGCGTGGCTGGGTCATGAGGGGTC 1392490 29 100.0 32 ............................. TCCTGGCGCGTGTGGGAACGGTTCTGCGCCGC 1392551 29 100.0 32 ............................. AACAACAAGCCGAAGACGAAGGACCCGGTTGC 1392612 29 100.0 32 ............................. ATGAGCGTCACGACGCGGGACCCGGGGGCGGC 1392673 29 100.0 32 ............................. GAGCGAGGCGCATCGGGCGCCGCGATGGCGTA 1392734 29 100.0 32 ............................. TGATGACTCATGAACCCCACCCTGGCTCCGTC 1392795 29 100.0 32 ............................. TTCTCCCTGACCGGCGAGAACAACCTCACCCT 1392856 29 100.0 32 ............................. GAACTCCTTGCCGCCCACCCCCCGACCGAAAG 1392917 29 100.0 32 ............................. GCCATGTTCGGGCTGATGACCGGGGACGCGGC 1392978 29 100.0 32 ............................. TACGCGGCGGAGTGGACCGCCGGGGCGCGCGA 1393039 29 100.0 32 ............................. TACGCGGGCCAGGGGTTCGGGGTCGGCCTCAT 1393100 29 100.0 32 ............................. CGATCTGAGAGAGCCCGCCGCCGCCTCCACCT 1393161 29 100.0 32 ............................. GAACTGAACGAAGCGATTGAAAGAGTCGTGGG 1393222 29 100.0 32 ............................. GCCCACCGGGCACCCCTCCCTCGCAGCCAGCC 1393283 29 100.0 32 ............................. AAGATCGGCGAGATCGGCGACGCTTCCAAGGC 1393344 29 100.0 32 ............................. TCGCCGTGGACGAAGGGATTCGACCCGGCGAA 1393405 29 100.0 32 ............................. GTACGTGAGGCGAAGGAGCAGGCGCGGGTCGC 1393466 29 100.0 32 ............................. CGAGAACGACGTCCGCGTCCTCACCGGCATCG 1393527 29 100.0 32 ............................. CTGGAGCCGCGCCTTCTCGCCCAGAACCCGAC 1393588 29 100.0 32 ............................. CCGAGACGCTCCTCAACACCGCCCTGGCTGTG 1393649 29 100.0 32 ............................. GAGCTCTCCTACGCCGACGGCAGCGTCACCGA 1393710 29 100.0 32 ............................. AAGGGCGACACCCTCACCACCCTCGCCACCCG 1393771 29 100.0 32 ............................. TTGGCGCCCAAGTACGTGCCCACGGCTGAGGC 1393832 29 100.0 32 ............................. TCCAGCGGCCAGACCCGCCTGTAACGCACAAC 1393893 29 100.0 32 ............................. CAGCGCGCCGCAGCCGGTGGGCGTCTCGCGAT 1393954 29 100.0 32 ............................. GCGGCCGGGGTGTGAACGGCCACGTTCGCCCG 1394015 29 100.0 32 ............................. AAGAAGGACGCCGCGCTCCTTACCCCGGCCGG 1394076 29 100.0 32 ............................. TCGCCGCGAACACCGCGGCAATCACCACGCTC 1394137 29 100.0 32 ............................. TCGAACCCGTCATCGGCTGCGGCAAGCTCGGC 1394198 29 100.0 32 ............................. CCTTCCTCGTCGCGCCACCGTTCCATCTCCTC 1394259 29 100.0 32 ............................. AGATCCGGGTCAAGGTCAGCCTGAAGAAACCG 1394320 29 100.0 32 ............................. TGCCGGCGCTTCGGGTCCCGGTACGGCGGACG 1394381 29 100.0 32 ............................. GTCTACGCCCAGCTGGAGGCGAGCCGGTGATG 1394442 29 100.0 32 ............................. TCCTCCGGTGTTCTGGGCTCCTTGCTACATCT 1394503 29 100.0 32 ............................. CCGCCTCAGCCCCCTCGGGTCCGGCCGGCACC 1394564 29 100.0 32 ............................. GCCGTAGCGCTCCAGCGCGGCCTGGGTGAGTA 1394625 29 100.0 32 ............................. TCCGGAGGCTGCGGGTGGTGGAAGGGCCTGGT 1394686 29 100.0 32 ............................. CCCTTCGTCCACGGCGACTTCGCCCGGCCGAG 1394747 29 100.0 32 ............................. GCGGGCATACGGTCCCCGCCCGCCGGGCTGCT 1394808 29 100.0 32 ............................. TCCTCGCAGCCCTCCGTGACGAAGCCGACCCC 1394869 29 96.6 32 .......................T..... TTCCTGCGCCCGGATTTCGCTGACCTGCGCCT 1394930 29 100.0 32 ............................. AGGAGCAGATCCTCACCGTCGGCTGCATCGAC 1394991 29 100.0 32 ............................. CTCACATGCGATTCAGCAGCGCGCAGGGGTGT 1395052 29 100.0 32 ............................. TCCCGGCGGCCGATCCGAAGGGAACCGCGCAT 1395113 29 100.0 32 ............................. GAGATGGAGAAACGTGTCCGACCGCTACCGCT 1395174 29 100.0 32 ............................. CTCCAGCAGGCATGCGGCCGACCCTGGGTCAT 1395235 29 100.0 32 ............................. CCGCGCAAGGAAATCCGGGACCTCCTCGCCCG 1395296 29 100.0 32 ............................. ATCGGCAGCCGGATCGGGGAGGTCCTCGACCA 1395357 29 100.0 32 ............................. CTGTAGGTCCGGTTGATGGCGGGCAGCGGGAG 1395418 29 100.0 32 ............................. CCCGGCGACTTCATTCCCGAGTGGGACCAGGA 1395479 29 100.0 32 ............................. GCGATGCTGGTGCTCGGCAGCAACGGCCGGCC 1395540 29 100.0 32 ............................. TTCCAGTTCCGGAAGAACAAGCAGGGGCAGCC 1395601 29 100.0 32 ............................. GTTTGTAATCGTGTCTGATCGCGAGGAGGAGA 1395662 28 93.1 32 ....................-.......A CCTGGAAGACGCCGAACTCGCGCTCGCGGTAC 1395722 29 100.0 32 ............................. GCCTCGGGCACGGTCGACGGGAACGACATCTC 1395783 29 100.0 32 ............................. AGGATGGCGGGGGCCGACCCGCGGCGCGCGTA 1395844 29 100.0 32 ............................. AGGTCCGGCGTGATCTTCAGCGAGGAAGAGGC 1395905 29 100.0 32 ............................. AGTTCGCCGGTCTGGCCGCTGAACTCCGGGCT 1395966 29 100.0 32 ............................. TCGAGGTTGGGGTCGTGCATGCCGACGATCGC 1396027 29 100.0 32 ............................. CCGCAGAGGCCACCGGGGTGCCGAAGACCGTC 1396088 29 100.0 32 ............................. CCGGAGGGCCCCGAGGGCGACGGCTGGCAGGT 1396149 29 96.6 32 ............................A GGGTCGCGATGAGGAGTGCGGCGACCCCGAGG 1396210 29 100.0 32 ............................. TTCGGAATGGGCCTCAACTGGGAGTCCTCTCC 1396271 29 100.0 32 ............................. CGTCGCCTCGATCGTGGCCAGCGACTGAATGG 1396332 29 100.0 32 ............................. ATGGCGCGCGAGGAGCTGCGACGCCAGCAGGA 1396393 29 100.0 32 ............................. TCCTGGAACGCTTTGGGGTCGGACAGCCACAT 1396454 29 100.0 32 ............................. GACTCCCGCTTGGTCGCCATGGTCAACCGGGA 1396515 29 100.0 32 ............................. CCCATGGTCCGCTGCCAGCGCGTCTTCGTCGG 1396576 29 100.0 32 ............................. TCAGGCGTAAGGCGACCAGCGCCCCCGCGGTA 1396637 29 100.0 32 ............................. GTCGGCCCGGACGGCGGGTCAGGCTGGCTTCC 1396698 29 100.0 32 ............................. GTGAGCGGTCGGGTGAGGAGGAGGACCGGCTG 1396759 29 100.0 32 ............................. CTGCTGGCCGGTGTCACGTGGACGGCTGGTCT 1396820 29 100.0 32 ............................. ACATGGCAGCCCGAGGACCAGGGCGGACCGCC 1396881 29 100.0 32 ............................. TGGTCCGCCGAGCCTGACGACGAGCCGCGGCC 1396942 29 100.0 32 ............................. TGTCCGCTCCGCCGTCGACCCGATCAGCTCCG 1397003 29 100.0 32 ............................. AACGCCGAGGCCCTGCAGCGGGTCGTCGACGT 1397064 29 100.0 32 ............................. CGGAGACCGACGCGGCCGTGTCCCTCGTCGGT 1397125 29 100.0 32 ............................. TATGTACCTGTCCTTCTGAGAGAAGTGGGACA 1397186 29 100.0 32 ............................. CAGTTCTCGTTCGCCTACGAGGTGGGCGAGGG 1397247 29 100.0 32 ............................. CCGTCCTTCGTGATCTCTTCAATGAAGGGGCC 1397308 29 100.0 32 ............................. GATGAGAGGGGCGATCGGGCACCTGTGCGGAT 1397369 29 96.6 33 ............................A GTCGATTAGCTCCCTGCCCTTCTCGCCGACTAT 1397431 29 96.6 32 .............C............... CCACAGCGCACCGGCGTTCGCGGCGACGATCG 1397492 29 100.0 35 ............................. GATGAGAGGGGCGAGGTCGTGGGCGCCGCTGGATG 1397556 29 100.0 32 ............................. CTTCTGATGACCCGGACCGGCTGCCGTCAGGT 1397617 29 100.0 32 ............................. GTCATCCGCGACGACATGCAAGAGGAGCTGAA 1397678 29 100.0 32 ............................. GAGACGTTGCGGCACGGCACGATCGCGCTCGC 1397739 29 100.0 32 ............................. GTGCGGCGCCAGTCCACCAGCACGGACACCGG 1397800 29 100.0 32 ............................. TTCACGTTCACGCTGTACTTCCTCCCTCCGCT 1397861 29 100.0 32 ............................. TATAGGACACGAGGGCAGGCCCAGACACCCCG 1397922 29 100.0 32 ............................. TAGGGGCGTGCCTTCCGGTAATCGACGGCCTT 1397983 29 100.0 32 ............................. ACGCCGGGGTGGAACGTGGTGCCGTAGCTGTC 1398044 29 100.0 32 ............................. ATCCTCGAAGCCCGCCTCTCCCAGGCGCAGAC 1398105 29 100.0 32 ............................. GCAGTCGACCACCCACCCGCTCTCGGCGGCCG 1398166 29 100.0 32 ............................. CGTGGCGGCTCCACTCAGGCGGGCACGGACCT 1398227 29 100.0 32 ............................. GTGGTGGAGCAGCAGACGTACGGCGACGGCAA 1398288 29 100.0 32 ............................. CAGTACGAACAGATCGGCAACGCCGTGCCGGC 1398349 29 100.0 32 ............................. CCAGCGTCGGCATACGGCACCACCGTCCCGGC 1398410 29 100.0 32 ............................. GTCGTGTCGGCCGATACCGGGCTCACGATCCA 1398471 29 100.0 32 ............................. GGCGGCGGCCAGTGATCGCCGCCCGCCTGCGG 1398532 29 100.0 32 ............................. AAGGTCACCGGCCAGGACAAGCCCACGACCGC 1398593 29 100.0 32 ............................. GGTCGAGTACCGGCCTGGCACAGGTAGGACAC 1398654 29 100.0 32 ............................. CGGTCGCCCGCATCCAGGCGGAACCGCAGGCA 1398715 29 100.0 32 ............................. CAGTCGGCCAGTGGCGCTGACGTGCATCAGTC 1398776 29 100.0 32 ............................. TACCGTGTGCAGCAGTTGCTGAAGACAGACAG 1398837 29 100.0 32 ............................. CGCCAGGCCGTCGCCGACCGCCTGGAGGAGAT 1398898 29 100.0 32 ............................. ACGGATGAGGCGGCGGCGCAGGCCCGGGAGTC C [1398900] 1398960 29 100.0 32 ............................. GATCTCGCCTGCTACTGCCCGCTTCCCGAGCC 1399021 29 100.0 32 ............................. CGTGGTGGAGCGCACCCGAATCCGCTCCATCG 1399082 29 100.0 32 ............................. TCCATGTCGGCGGGGGCGAGAGTCACCGTGGC 1399143 29 100.0 32 ............................. CATGAGGGCATCTGCCGCGAGCAGCAGCATCG 1399204 29 96.6 32 ..........A.................. CTGCCGTCGGTGCGCAGGAGAAGGGCATGGAG 1399265 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =================================== ================== 128 29 99.8 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCCCCGCATCGTCACCGACATCCAGCAGCTCCTCGACCCGAACCACACCTACGAATGCCCCGACCCCGAAGAGCAAATGGTCGACCTGTGGGACCCGGTCTCAGGCTCAGTCCCCGCCGGCGTCAACCACGGACAACAGCAGTGACCCGCCCACCGGAAAGGCACGGTCCATGTCCTCGATGATCGTCATCTCGGCCACCGCCGTCCCTGACCACCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTCACACCCGAGCTCTACGTCGGCACCGTCTCCGCCAAGGTCCGCGATGAACTCTGGTCAGCTGTCACCGCCTGTGCCAACGACGGCATCGCAGTCCTCGCCCACCCCGCCGACAACGAACAAGGCTTCCAACTACGAACAGCAGGCACTCGCCGCCGAGAACCCATGGACTTTGACGGCCTCACCCTGATCGCCTTCCAGCGAGAAAGTCAAGAAATGGCAAACCTCCTCTAACGTGCCAGGTCAAAGAGG # Right flank : GGACAACGTGCTAGGCCGTGTATCGAAAGTGGATCTTGAGCAATGAATGATCGCGGTTCATGGCGCGGGGAGATCTCACGGACGAACAGTGGGCAATGTTGGGGCCGTTGTTGCCAAAGGGGACGAAGGCGGGACGGCCGCCCGTCTGGCCCCGACGACAACTGATCAACGGCATACGGTTCCGGGTCCGTACTGGTGTTCCGTGGCGGGACATACCCATCGAGTACGGGCCGTGGGGCCGGATCTACGACCTGTTCCGCCGATGGCAGCGGAACGGCACCTGGCACCAAGTCCTCACCCAGCTCCAGTCCCTGGCCGACGCGAAGGGTGAGATCGTGTGGGACCTGAGCGTCGACTCCACCGTGTGCCGCGCCCATCAGCATGCGGCCGGGGCCAGGAATCAGGGCGACCTGCAGAAGGAACCGCCGGGCGGTAACTTCACCGAACCCCGTGATCATGGACTGGGACGCTCACGCGGCGGGTTCACCACCAAGCTGCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //