Array 1 31683-27068 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFIZ01000027.1 Corynebacterium nuruki S6-4 contig00028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 31682 29 96.6 32 ............................G GTCTGGTAACGATGGCGTACCCCGGCTACCTG 31621 29 100.0 32 ............................. GCAGACCCGACACACAGCAGGCCGATGCCGAT 31560 29 96.6 33 ............................A CTGTTCCCGTGAGAGTGCGTCAAATTTGCGTAA 31498 29 96.6 32 ............................T CCTGTGCAATCCCATCCGCGTTCAGCTCCGCG 31437 29 100.0 32 ............................. GACGGGGCAATGGACCTGGCAGACAGTGAAGC 31376 29 96.6 33 ............................G GCTGCGATGGCTGACGCTGCGGTGAAGATCGTG 31314 29 100.0 32 ............................. AAGCAGACGAACCAGTGGGAGGACGGCGAGGC 31253 29 100.0 32 ............................. ATCGCGGCGCAGTGGGACCGCGTGCGCGAGGC 31192 29 100.0 32 ............................. GTGAGCTTCCCGCAGGGTGTGAACATCGTCCA 31131 29 96.6 32 ............................G GCCGAGGAGGACGGCACTCTCGAGCAGGCGCG 31070 29 100.0 32 ............................. AACCCGTCCGGGCCGGTCGTCGCACACCTGGG 31009 29 96.6 32 ............................G GAAGTCCGGGTCGACACCGGGCGGCCTTGTGC 30948 29 100.0 32 ............................. GACGCCGACAATGCGCCTGCGGGTGGCCTGTC 30887 29 96.6 33 ............................A CGACAACCAGCGCATGGCGCGCAACGGTGACTT 30825 29 100.0 32 ............................. GATCTGATCGAAGCGGGCTATGTGGAGCGGGT 30764 29 96.6 32 ............................G CATGAGTGATCTGGTTCAGGAAGTCCGAACGC 30703 29 96.6 32 ............................G CAGCAGACGCTGAAGCAGACGACGCAGCAGCA 30642 29 100.0 32 ............................. GAAGTGCAGATGTGGATCAACGAACAAACCCA 30581 29 100.0 32 ............................. CGGTCGGGGGCGAGGGCTTTGCCGCGGGCGAG 30520 29 96.6 32 ............................T CCGAAGGCTGTGCCCTTGACGGACGCCATCGC 30459 29 100.0 32 ............................. GCCCTCGGCGGACCGTGGGGTGTCGTCATCGG 30398 29 100.0 32 ............................. TCCTCGGATGGAAGGAACCATGACCCGCACCC 30337 29 100.0 32 ............................. TCGTCCAGGTCCTCGTTGCCGCCGGCCTCATC 30276 29 100.0 32 ............................. AACGCAAAAAAGACCCCCTAGCGCCAAAGCGC 30215 29 96.6 32 ............................G TGCTCGGCTTCCCCGCGTCGGCAGCGCAGGCG 30154 29 100.0 32 ............................. CTCGACATTATCGAGGACTATCTCATGACCGC 30093 29 100.0 32 ............................. GTCGAGGATCACAAGTTGCGCCATCCGGTCGC 30032 29 96.6 33 ............................A CGGGTCCACCTCCAGCGCCTGGTCGATCCCGTC 29970 29 100.0 32 ............................. TCCGTGGCAGGAGGCACTCCCTGACTCACTTC 29909 29 100.0 32 ............................. TCGCGCTGTTCCCCGTCCACGGTGACCTGCCA 29848 29 100.0 32 ............................. TGACACCGAGGCGCCGGCACGCGTCCGGTACA 29787 29 100.0 32 ............................. GGCGAATTCCACGGCTTCGACACCGAGGCCGA 29726 29 100.0 32 ............................. TGCTGCACAACAAGTGCCTGGTTGTGAACGAG 29665 29 96.6 32 ............................G CCCGCGCCGAGGTGGAACGCCTCACCGCCGAG 29604 29 100.0 32 ............................. GGAGGCCACCTGTATGTGAGACTAAATAGGCC 29543 29 100.0 33 ............................. CCCGTCACACGCGCCATATCAGCGACCGTCAGG 29481 29 100.0 32 ............................. GAGACCTCAGGCTGCTAAGGGCATTGCGGCGC 29420 29 100.0 32 ............................. ACCGACGCTGTGGCCGCCGACCTCCTGGTCGC 29359 29 96.6 33 ............................A CTGGGCTGCGGCGTTTTCTCCGAGGGCTTCCCA 29297 29 96.6 32 ............................G CAGTAGGTATCCACGCTTTGTGGGCGGCGAGC 29236 29 96.6 33 ............................T GAGCCGAATGATCGGATGTTCACCCCTTACTCG 29174 29 96.6 32 ............................G CAACCTGACGATCAACCATCTCCGCCAACGGA 29113 29 96.6 33 ............................G GAGAAGCACAACCCGCCGAGGAAGTTCCGCAAT 29051 29 100.0 32 ............................. AATCTCTTCCCGGATTACGTCCAGAATCCGTG 28990 29 100.0 32 ............................. GTTCACTGGGTAGACCTCTCTCGTAGTCACGT 28929 29 100.0 32 ............................. CACGATCCGTGAGACGACACGTTCGCCAGCAT 28868 29 100.0 32 ............................. CCGTGCCCGTCATGCCACAAGGTAACCGTCTC 28807 29 100.0 32 ............................. AGGGTCAGTCACCAGTTACCCTATTCATCTCG 28746 29 100.0 32 ............................. GGGGGACGCACCGACCCCGACCTCCTGGAATA 28685 29 96.6 32 ............................G GGCATTGACCGGTTCCGCGAGAAGCACGGCGC 28624 29 100.0 32 ............................. CGGAACCACCGTCCACGCAGTGGCGCTAAAAA 28563 29 100.0 33 ............................. GGGATCGGGATCTGCCACGACTGCCACGATTAC 28501 29 100.0 32 ............................. AGGCACTCCGATGCGCCGGTGACCGCGAGCTG 28440 29 100.0 32 ............................. TCCGACGAAGACCGAATCTCGCCCGCATCCAC 28379 29 100.0 32 ............................. TGGCAGCACTGCGCACGCATGGTGTTCTGCGG 28318 29 100.0 32 ............................. GTCACGTCGTTCATGACGGCGGTGATTGCCTC 28257 29 96.6 32 ............................G CACATAGAGCCTGTTGCCGCCCCACTGAGAAT 28196 29 100.0 32 ............................. AGTGCGGGGCGGGCATTCATCGCCGTGGTTGC 28135 29 100.0 32 ............................. CGGCCGGACTCGGTGACGTAAGCGCCGGTCGG 28074 29 100.0 32 ............................. GGTGACGGGGATGATGCCCCATCCGGATGCCT 28013 29 96.6 32 ............................G TCTCGAGCAACTGGCATCGTGACCATGTGTGC 27952 29 96.6 32 ............................G CATCCACCATCACCCCGATGTACCTCACCCGA 27891 29 96.6 32 ............................G TCCCTGTACTACATCGGCGCTGCGGTCGTCGC 27830 29 96.6 32 ............................G CCCGCGCAACCGCCCGCCGCAACGCGGAACGG 27769 29 100.0 32 ............................. AGCAGCAGGCCCAGCAGCAGATGGCCCAGATG 27708 29 100.0 32 ............................. CCGCTCGTCGTCCCTGACGGGTGGAGCTACCG 27647 29 96.6 33 ............................G CACGACCTGGATGCCATGCTCGGCGGTGGTGCC 27585 29 96.6 32 ............................G TTCAGGTCGACGCCGCAGCCTCTAGCCCGTGT 27524 29 96.6 32 ......G...................... ACGGGTCAGGGTGCGCAGGTCCGGGTCGGACC 27463 29 96.6 32 ............................G TACCTCTGGCGGGCCGGGCGGAAGGGCGAACC 27402 29 100.0 32 ............................. ACGTCCCACGCCGACACACCCAGAGCGGCCGT 27341 29 100.0 32 ............................. ACGCTCGCAGCAGTATCCGACGCCATGACCTC 27280 29 93.1 32 .................T..........G GCCGCCCAGGCGCACGAGGACGCCGCCAAAGC 27219 29 100.0 32 ............................. GCGTCCGGCACGCCGGCGATGATCGTGGTGGC 27158 29 96.6 32 ............................T CCGATTCGGCGTCGCCTGATAGGTCGCCTGCG 27097 29 96.6 0 ............................A | T [27071] ========== ====== ====== ====== ============================= ================================= ================== 76 29 98.6 32 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : CGACGTCGTCCAACTCTGGGATGAGAAGGACCACAGTGTGGTCGGAGGGATGAACTACAGCGACGATGCTGCTGACCACGCGGTGGAAAGCCCGGATAGGCCATGATGACGCTGGTCCTTTCCGCATCGCCGGCTCAGCTGCGTGGGCAACTCACCCGATGGTTGATGGAGGTGAGCCCCGGTGTGTACGTCGGCAGAGTCAGCGCTCGCGTCCGTGAGGAACTATGGCTCCTGGTGACCAGCAACATGGATTCGGGCCGCGCGGTGATGACCTATCCGACGAACAAGAATGAGCAGGGTTTCGTCGTGGAAGTGCATCGCGGTCAATGGACTCCAGTGGACATTGAGGGGATGACGTTGATGAAGCACCCGTTGACAACAGAGAAGGGCGCGATGAAGGCGGGGTGGTCGCGTGCTTCGCGGTTGAGGAAGGCTGCGCGACGGAGACGAAACTAAGGTAAATTCGGCCGCTGGGATCGATGATGTACTGGTCAACAAGG # Right flank : TAGCCTCGGCGACTGCCGGAATCCTCCTGCCGCACTTCGTGCGTAAGCAGACGCGCACCGCCTCTGCCGCTGCCCACCCGCCACGCGGCAGCCCCGCCCGCACACAGCAAAACCCCCGCAGTCCAGACGATGGCTGCGGGGGTTTTCCGTCCGGGCGGCAGCCCGGAGGGGTCCGTCAGTTAGACGAACAGGCCGGCGACGGCGTCGACGAGGCCGGTGATGCCGTCCTGGAGCAGGCCGACGACGGTGGTCAGGAAGGTGGAGATGGTGTCGATCATGATGGATCCCTTTCAGTGGATTCATGGTGAAAGGCGCAAGGTTTCACGCCGCTGATCAGACAAACGGGGTGCCGGCGGGATTGTTACGCTCCTTGCGGCAACTACCCCCGTCATTCACCCCTGACCCGGCGACTGTGCAGGTCACAGACGGAAAACCGGCCCCGGACGCGAGGTCCGGGGCCGGGCTGCAGGGGGAGACTGTTACACGAACAGGCCCGCGAC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //